RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 PPM1FP49593 454 aaPredicted RBP7.31□□□□□ -1.24
CLCN3-204ENST00000504131 C22orf23Q9BZE7 217 aa7.31□□□□□ -1.24
CLCN3-204ENST00000504131 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.31□□□□□ -1.24
CLCN3-204ENST00000504131 WRNQ14191 1432 aaPredicted RBP eCLIP7.31□□□□□ -1.24
CLCN3-204ENST00000504131 ATP6V1E1P36543 226 aa7.31□□□□□ -1.24
CLCN3-204ENST00000504131 KIF11P52732 1056 aa7.31□□□□□ -1.24
CLCN3-204ENST00000504131 GRM1Q13255 1194 aa7.31□□□□□ -1.24
CLCN3-204ENST00000504131 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.31□□□□□ -1.24
CLCN3-204ENST00000504131 VEZTQ9HBM0 779 aa7.31□□□□□ -1.24
CLCN3-204ENST00000504131 RFX1P22670 979 aa7.31□□□□□ -1.24
CLCN3-204ENST00000504131 PEX19P40855 299 aa7.31□□□□□ -1.24
CLCN3-204ENST00000504131 GOLGA2Q08379 1002 aa7.31□□□□□ -1.24
CLCN3-204ENST00000504131 SART3Q15020 963 aaKnown RBP7.31□□□□□ -1.24
CLCN3-204ENST00000504131 ZSCAN26Q16670 478 aa7.31□□□□□ -1.24
CLCN3-204ENST00000504131 FEZ1Q99689 392 aa7.31□□□□□ -1.24
CLCN3-204ENST00000504131 PAGR1Q9BTK6 254 aa7.31□□□□□ -1.24
CLCN3-204ENST00000504131 CCDC189A1A4V9 331 aa7.31□□□□□ -1.24
CLCN3-204ENST00000504131 NUTM1Q86Y26 1132 aa7.31□□□□□ -1.24
CLCN3-204ENST00000504131 ZNF280CQ8ND82 737 aa7.31□□□□□ -1.24
CLCN3-204ENST00000504131 NMIQ13287 307 aaPredicted RBP7.3□□□□□ -1.24
CLCN3-204ENST00000504131 ELL2O00472 640 aaPredicted RBP7.3□□□□□ -1.24
CLCN3-204ENST00000504131 XPCQ01831 940 aaPredicted RBP7.3□□□□□ -1.24
CLCN3-204ENST00000504131 IMMTQ16891 758 aaKnown RBP7.3□□□□□ -1.24
CLCN3-204ENST00000504131 UNC45AQ9H3U1 944 aa7.3□□□□□ -1.24
CLCN3-204ENST00000504131 IFT57Q9NWB7 429 aa7.3□□□□□ -1.24
CLCN3-204ENST00000504131 KIF27Q86VH2 1401 aa7.3□□□□□ -1.24
CLCN3-204ENST00000504131 FRMD3A2A2Y4 597 aa7.3□□□□□ -1.24
CLCN3-204ENST00000504131 DMPKQ09013 629 aa7.3□□□□□ -1.24
CLCN3-204ENST00000504131 HSP90AA5PQ58FG0 334 aa7.3□□□□□ -1.24
CLCN3-204ENST00000504131 MICALL1Q8N3F8 863 aa7.3□□□□□ -1.24
CLCN3-204ENST00000504131 SEPT10Q9P0V9 454 aa7.3□□□□□ -1.24
CLCN3-204ENST00000504131 WDR97A6NE52 1622 aa7.3□□□□□ -1.24
CLCN3-204ENST00000504131 RHBDL3P58872 404 aa7.3□□□□□ -1.24
CLCN3-204ENST00000504131 E2F4Q16254 413 aa7.3□□□□□ -1.24
CLCN3-204ENST00000504131 SKIDA1Q1XH10 827 aa7.3□□□□□ -1.24
CLCN3-204ENST00000504131 DDX46Q7L014 1031 aaKnown RBP7.3□□□□□ -1.24
CLCN3-204ENST00000504131 RSPH9Q9H1X1 276 aaPredicted RBP7.3□□□□□ -1.24
CLCN3-204ENST00000504131 ETAA1Q9NY74 926 aa7.3□□□□□ -1.24
CLCN3-204ENST00000504131 CARMIL2Q6F5E8 1435 aa7.3□□□□□ -1.24
CLCN3-204ENST00000504131 PDE4AP27815 886 aa7.3□□□□□ -1.24
CLCN3-204ENST00000504131 PPM1EQ8WY54 764 aa7.3□□□□□ -1.24
CLCN3-204ENST00000504131 EPSTI1Q96J88 318 aa7.3□□□□□ -1.24
CLCN3-204ENST00000504131 IWS1Q96ST2 819 aa7.3□□□□□ -1.24
CLCN3-204ENST00000504131 IVLP07476 585 aa7.29□□□□□ -1.24
CLCN3-204ENST00000504131 TPP2P29144 1249 aaPredicted RBP7.29□□□□□ -1.24
CLCN3-204ENST00000504131 SDCCAG8Q86SQ7 713 aaPredicted RBP7.29□□□□□ -1.24
CLCN3-204ENST00000504131 FOSL1P15407 271 aa7.29□□□□□ -1.24
CLCN3-204ENST00000504131 BIRC3Q13489 604 aa7.29□□□□□ -1.24
CLCN3-204ENST00000504131 PUS10Q3MIT2 529 aaKnown RBP7.29□□□□□ -1.24
CLCN3-204ENST00000504131 WAPLQ7Z5K2 1190 aa7.29□□□□□ -1.24
CLCN3-204ENST00000504131 SPATA32Q96LK8 384 aa7.29□□□□□ -1.24
CLCN3-204ENST00000504131 FMNL2Q96PY5 1086 aa7.29□□□□□ -1.24
CLCN3-204ENST00000504131 TMOD4Q9NZQ9 345 aa7.29□□□□□ -1.24
CLCN3-204ENST00000504131 ANKRD18BA2A2Z9 1011 aa7.29□□□□□ -1.24
CLCN3-204ENST00000504131 PPP1R15AO75807 674 aaPredicted RBP7.29□□□□□ -1.24
CLCN3-204ENST00000504131 KCNA2P16389 499 aa7.29□□□□□ -1.24
CLCN3-204ENST00000504131 SEPT6Q14141 434 aa7.29□□□□□ -1.24
CLCN3-204ENST00000504131 SPATA17Q96L03 361 aa7.29□□□□□ -1.24
CLCN3-204ENST00000504131 ERLIN1O75477 346 aa7.29□□□□□ -1.24
CLCN3-204ENST00000504131 GJA8P48165 433 aa7.29□□□□□ -1.24
CLCN3-204ENST00000504131 TRIM42Q8IWZ5 723 aa7.29□□□□□ -1.24
CLCN3-204ENST00000504131 TEKT1Q969V4 418 aa7.29□□□□□ -1.24
CLCN3-204ENST00000504131 ABCF2Q9UG63 623 aa7.29□□□□□ -1.24
CLCN3-204ENST00000504131 KIF16BQ96L93 1317 aa7.28□□□□□ -1.24
CLCN3-204ENST00000504131 ERCC5P28715 1186 aaPredicted RBP7.28□□□□□ -1.24
CLCN3-204ENST00000504131 PSMD6Q15008 389 aa7.28□□□□□ -1.24
CLCN3-204ENST00000504131 CEP57L1Q8IYX8 460 aa7.28□□□□□ -1.24
CLCN3-204ENST00000504131 SLC20A2Q08357 652 aa7.28□□□□□ -1.24
CLCN3-204ENST00000504131 TTC19Q6DKK2 380 aaPredicted RBP7.28□□□□□ -1.24
CLCN3-204ENST00000504131 OLFML1Q6UWY5 402 aa7.28□□□□□ -1.24
CLCN3-204ENST00000504131 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.28□□□□□ -1.24
CLCN3-204ENST00000504131 CEP128Q6ZU80 1094 aa7.28□□□□□ -1.24
CLCN3-204ENST00000504131 BICD1Q96G01 975 aa7.28□□□□□ -1.24
CLCN3-204ENST00000504131 MRGBPQ9NV56 204 aa7.28□□□□□ -1.24
CLCN3-204ENST00000504131 EZRP15311 586 aaKnown RBP7.28□□□□□ -1.24
CLCN3-204ENST00000504131 MSL1Q68DK7 614 aa7.28□□□□□ -1.24
CLCN3-204ENST00000504131 CCDC80Q76M96 950 aa7.28□□□□□ -1.24
CLCN3-204ENST00000504131 MRS2Q9HD23 443 aa7.28□□□□□ -1.24
CLCN3-204ENST00000504131 SASH1O94885 1247 aa7.27□□□□□ -1.24
CLCN3-204ENST00000504131 TOMM20Q15388 145 aa7.27□□□□□ -1.24
CLCN3-204ENST00000504131 HHATQ5VTY9 493 aa7.27□□□□□ -1.24
CLCN3-204ENST00000504131 IQCA1Q86XH1 822 aa7.27□□□□□ -1.24
CLCN3-204ENST00000504131 IKQ13123 557 aaPredicted RBP7.27□□□□□ -1.25
CLCN3-204ENST00000504131 MLECQ14165 292 aa7.27□□□□□ -1.25
CLCN3-204ENST00000504131 ACBD5Q5T8D3 534 aaPredicted RBP7.27□□□□□ -1.25
CLCN3-204ENST00000504131 MED4Q9NPJ6 270 aa7.27□□□□□ -1.25
CLCN3-204ENST00000504131 RWDD2BP57060 319 aa7.27□□□□□ -1.25
CLCN3-204ENST00000504131 GNL2Q13823 731 aaKnown RBP7.27□□□□□ -1.25
CLCN3-204ENST00000504131 PRIMPOLQ96LW4 560 aa7.27□□□□□ -1.25
CLCN3-204ENST00000504131 ZNF396Q96N95 335 aaPredicted RBP7.27□□□□□ -1.25
CLCN3-204ENST00000504131 PAXBP1Q9Y5B6 917 aa7.27□□□□□ -1.25
CLCN3-204ENST00000504131 FERP16591 822 aa7.27□□□□□ -1.25
CLCN3-204ENST00000504131 BMS1Q14692 1282 aaKnown RBP7.27□□□□□ -1.25
CLCN3-204ENST00000504131 NINLQ9Y2I6 1382 aa7.27□□□□□ -1.25
CLCN3-204ENST00000504131 MSL3P1P0C860 447 aa7.27□□□□□ -1.25
CLCN3-204ENST00000504131 SMC1AQ14683 1233 aaKnown RBP7.27□□□□□ -1.25
CLCN3-204ENST00000504131 MCTP2Q6DN12 878 aa7.27□□□□□ -1.25
CLCN3-204ENST00000504131 NAP1L3Q99457 506 aaPredicted RBP7.27□□□□□ -1.25
CLCN3-204ENST00000504131 RABEP2Q9H5N1 569 aa7.27□□□□□ -1.25
CLCN3-204ENST00000504131 CHMP5Q9NZZ3 219 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms