RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 USP8P40818 1118 aa7.09□□□□□ -1.27
LINC01340-201ENST00000504012 ANAPC15P60006 121 aa7.09□□□□□ -1.27
LINC01340-201ENST00000504012 TMF1P82094 1093 aa7.09□□□□□ -1.27
LINC01340-201ENST00000504012 CUL4AQ13619 759 aa7.09□□□□□ -1.27
LINC01340-201ENST00000504012 ZKSCAN2Q63HK3 967 aa7.09□□□□□ -1.27
LINC01340-201ENST00000504012 CEP135Q66GS9 1140 aa7.09□□□□□ -1.27
LINC01340-201ENST00000504012 KRBA2Q6ZNG9 492 aa7.09□□□□□ -1.27
LINC01340-201ENST00000504012 FILIP1Q7Z7B0 1213 aa7.09□□□□□ -1.27
LINC01340-201ENST00000504012 C10orf67Q8IYJ2 551 aa7.09□□□□□ -1.27
LINC01340-201ENST00000504012 DZIP1LQ8IYY4 767 aaKnown RBP7.09□□□□□ -1.27
LINC01340-201ENST00000504012 JMYQ8N9B5 988 aa7.09□□□□□ -1.27
LINC01340-201ENST00000504012 CCDC191Q8NCU4 936 aa7.09□□□□□ -1.27
LINC01340-201ENST00000504012 RNF214Q8ND24 703 aa7.09□□□□□ -1.27
LINC01340-201ENST00000504012 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.09□□□□□ -1.27
LINC01340-201ENST00000504012 GCC1Q96CN9 775 aa7.09□□□□□ -1.27
LINC01340-201ENST00000504012 TESK2Q96S53 571 aa7.09□□□□□ -1.27
LINC01340-201ENST00000504012 FUCA2Q9BTY2 467 aa7.09□□□□□ -1.27
LINC01340-201ENST00000504012 ARGLU1Q9NWB6 273 aaPredicted RBP7.09□□□□□ -1.27
LINC01340-201ENST00000504012 ATP1B4Q9UN42 357 aaPredicted RBP7.09□□□□□ -1.27
LINC01340-201ENST00000504012 LRRFIP2Q9Y608 721 aaKnown RBP7.09□□□□□ -1.27
LINC01340-201ENST00000504012 PRDM15P57071 1507 aaPredicted RBP7.09□□□□□ -1.27
LINC01340-201ENST00000504012 LRRIQ1Q96JM4 1722 aa7.09□□□□□ -1.27
LINC01340-201ENST00000504012 ABCC10Q5T3U5 1492 aa7.09□□□□□ -1.27
LINC01340-201ENST00000504012 ABCC5O15440 1437 aa7.09□□□□□ -1.28
LINC01340-201ENST00000504012 ERBINQ96RT1 1412 aa7.09□□□□□ -1.28
LINC01340-201ENST00000504012 CC2D2AQ9P2K1 1620 aa7.09□□□□□ -1.28
LINC01340-201ENST00000504012 EIF4G3O43432 1585 aaKnown RBP7.08□□□□□ -1.28
LINC01340-201ENST00000504012 ANKRD33BA6NCL7 494 aa7.08□□□□□ -1.28
LINC01340-201ENST00000504012 HAX1O00165 279 aa7.08□□□□□ -1.28
LINC01340-201ENST00000504012 APAF1O14727 1248 aa7.08□□□□□ -1.28
LINC01340-201ENST00000504012 C21orf2O43822 256 aa7.08□□□□□ -1.28
LINC01340-201ENST00000504012 CDC45O75419 566 aa7.08□□□□□ -1.28
LINC01340-201ENST00000504012 PNMA6AP0CW24 399 aaPredicted RBP7.08□□□□□ -1.28
LINC01340-201ENST00000504012 NEFHP12036 1026 aa7.08□□□□□ -1.28
LINC01340-201ENST00000504012 ACTN2P35609 894 aa7.08□□□□□ -1.28
LINC01340-201ENST00000504012 MAP2K2P36507 400 aa7.08□□□□□ -1.28
LINC01340-201ENST00000504012 PLA2G4AP47712 749 aa7.08□□□□□ -1.28
LINC01340-201ENST00000504012 CORO7P57737 925 aa7.08□□□□□ -1.28
LINC01340-201ENST00000504012 TSGA10IPQ3SY00 556 aa7.08□□□□□ -1.28
LINC01340-201ENST00000504012 HSP90AB4PQ58FF6 505 aa7.08□□□□□ -1.28
LINC01340-201ENST00000504012 LRCH2Q5VUJ6 765 aa7.08□□□□□ -1.28
LINC01340-201ENST00000504012 LHX8Q68G74 356 aa7.08□□□□□ -1.28
LINC01340-201ENST00000504012 FBXO38Q6PIJ6 1188 aa7.08□□□□□ -1.28
LINC01340-201ENST00000504012 CHD1LQ86WJ1 897 aa7.08□□□□□ -1.28
LINC01340-201ENST00000504012 EXOC8Q8IYI6 725 aa7.08□□□□□ -1.28
LINC01340-201ENST00000504012 C17orf53Q8N3J3 647 aaPredicted RBP7.08□□□□□ -1.28
LINC01340-201ENST00000504012 ANKRD20A12PQ8NF67 263 aa7.08□□□□□ -1.28
LINC01340-201ENST00000504012 IL17RAQ96F46 866 aa7.08□□□□□ -1.28
LINC01340-201ENST00000504012 L2HGDHQ9H9P8 463 aa7.08□□□□□ -1.28
LINC01340-201ENST00000504012 CHIC2Q9UKJ5 165 aa7.08□□□□□ -1.28
LINC01340-201ENST00000504012 ATP10AO60312 1499 aa7.08□□□□□ -1.28
LINC01340-201ENST00000504012 ASXL1Q8IXJ9 1541 aa7.07□□□□□ -1.28
LINC01340-201ENST00000504012 CUL7Q14999 1698 aa7.07□□□□□ -1.28
LINC01340-201ENST00000504012 PLEKHD1A6NEE1 506 aa7.07□□□□□ -1.28
LINC01340-201ENST00000504012 CAVIN2O95810 425 aa7.07□□□□□ -1.28
LINC01340-201ENST00000504012 RLBP1P12271 317 aa7.07□□□□□ -1.28
LINC01340-201ENST00000504012 ZRSR1Q15695 479 aaKnown RBP7.07□□□□□ -1.28
LINC01340-201ENST00000504012 NBPF6Q5VWK0 638 aa7.07□□□□□ -1.28
LINC01340-201ENST00000504012 TBC1D9Q6ZT07 1266 aa7.07□□□□□ -1.28
LINC01340-201ENST00000504012 NYAP1Q6ZVC0 841 aa7.07□□□□□ -1.28
LINC01340-201ENST00000504012 NBPF5PQ86XG9 351 aaPredicted RBP7.07□□□□□ -1.28
LINC01340-201ENST00000504012 EFCAB13Q8IY85 973 aa7.07□□□□□ -1.28
LINC01340-201ENST00000504012 ZBTB9Q96C00 473 aa7.07□□□□□ -1.28
LINC01340-201ENST00000504012 NBPF4Q96M43 638 aa7.07□□□□□ -1.28
LINC01340-201ENST00000504012 SRRTQ9BXP5 876 aaKnown RBP7.07□□□□□ -1.28
LINC01340-201ENST00000504012 TERF2IPQ9NYB0 399 aa7.07□□□□□ -1.28
LINC01340-201ENST00000504012 AMOTL2Q9Y2J4 779 aa7.07□□□□□ -1.28
LINC01340-201ENST00000504012 SH3BP1Q9Y3L3 701 aa7.07□□□□□ -1.28
LINC01340-201ENST00000504012 PRAG1Q86YV5 1406 aa7.07□□□□□ -1.28
LINC01340-201ENST00000504012 EIF2AK4Q9P2K8 1649 aaKnown RBP7.06□□□□□ -1.28
LINC01340-201ENST00000504012 A0A087WUV0 522 aaPredicted RBP7.06□□□□□ -1.28
LINC01340-201ENST00000504012 KCNJ6P48051 423 aa7.06□□□□□ -1.28
LINC01340-201ENST00000504012 IRX1P78414 480 aaPredicted RBP7.06□□□□□ -1.28
LINC01340-201ENST00000504012 MLECQ14165 292 aa7.06□□□□□ -1.28
LINC01340-201ENST00000504012 NUTM1Q86Y26 1132 aa7.06□□□□□ -1.28
LINC01340-201ENST00000504012 GPATCH11Q8N954 259 aa7.06□□□□□ -1.28
LINC01340-201ENST00000504012 ITFG2Q969R8 447 aa7.06□□□□□ -1.28
LINC01340-201ENST00000504012 DRC1Q96MC2 740 aa7.06□□□□□ -1.28
LINC01340-201ENST00000504012 USP26Q9BXU7 913 aa7.06□□□□□ -1.28
LINC01340-201ENST00000504012 NBPF3Q9H094 633 aa7.06□□□□□ -1.28
LINC01340-201ENST00000504012 ZBTB40Q9NUA8 1239 aa7.06□□□□□ -1.28
LINC01340-201ENST00000504012 ZNF215Q9UL58 517 aaPredicted RBP7.06□□□□□ -1.28
LINC01340-201ENST00000504012 NSFL1CQ9UNZ2 370 aaKnown RBP7.06□□□□□ -1.28
LINC01340-201ENST00000504012 POLR3AO14802 1390 aaPredicted RBP7.06□□□□□ -1.28
LINC01340-201ENST00000504012 AATKQ6ZMQ8 1374 aa7.06□□□□□ -1.28
LINC01340-201ENST00000504012 CADPSQ9ULU8 1353 aa7.06□□□□□ -1.28
LINC01340-201ENST00000504012 KIAA0586Q9BVV6 1533 aa7.06□□□□□ -1.28
LINC01340-201ENST00000504012 ADGBQ8N7X0 1667 aa7.06□□□□□ -1.28
LINC01340-201ENST00000504012 ITSN2Q9NZM3 1697 aa7.06□□□□□ -1.28
LINC01340-201ENST00000504012 WDR7Q9Y4E6 1490 aa7.05□□□□□ -1.28
LINC01340-201ENST00000504012 WDR33Q9C0J8 1336 aaKnown RBP7.05□□□□□ -1.28
LINC01340-201ENST00000504012 TMCO5BA8MYB1 307 aa7.05□□□□□ -1.28
LINC01340-201ENST00000504012 TRIM66O15016 1216 aa7.05□□□□□ -1.28
LINC01340-201ENST00000504012 EPB41L2O43491 1005 aaKnown RBP7.05□□□□□ -1.28
LINC01340-201ENST00000504012 UBE2HP62256 183 aa7.05□□□□□ -1.28
LINC01340-201ENST00000504012 MKRN4PQ13434 485 aaPredicted RBP7.05□□□□□ -1.28
LINC01340-201ENST00000504012 PTPN14Q15678 1187 aa7.05□□□□□ -1.28
LINC01340-201ENST00000504012 TPD52L1Q16890 204 aaPredicted RBP7.05□□□□□ -1.28
LINC01340-201ENST00000504012 CCDC93Q567U6 631 aa7.05□□□□□ -1.28
LINC01340-201ENST00000504012 TMCO3Q6UWJ1 677 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms