RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 PLEKHG2Q9H7P9 1386 aa26.88■■□□□ 1.89
UBE2D3-216ENST00000503742 NLRP2Q9NX02 1062 aa26.88■■□□□ 1.89
UBE2D3-216ENST00000503742 SIPA1L3O60292 1781 aaPredicted RBP26.88■■□□□ 1.89
UBE2D3-216ENST00000503742 CHRNA2Q15822 529 aa26.88■■□□□ 1.89
UBE2D3-216ENST00000503742 HOXB7P09629 217 aa26.87■■□□□ 1.89
UBE2D3-216ENST00000503742 GCC1Q96CN9 775 aa26.87■■□□□ 1.89
UBE2D3-216ENST00000503742 RAPGEF4Q8WZA2 1011 aa26.86■■□□□ 1.89
UBE2D3-216ENST00000503742 FLIIQ13045 1269 aa26.86■■□□□ 1.89
UBE2D3-216ENST00000503742 BTBD11A6QL63 1104 aa26.85■■□□□ 1.89
UBE2D3-216ENST00000503742 CCT4P50991 539 aaKnown RBP26.84■■□□□ 1.89
UBE2D3-216ENST00000503742 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.84■■□□□ 1.89
UBE2D3-216ENST00000503742 ATP10DQ9P241 1426 aa26.84■■□□□ 1.89
UBE2D3-216ENST00000503742 MEGF6O75095 1541 aa26.84■■□□□ 1.89
UBE2D3-216ENST00000503742 KCNQ3O43525 872 aa26.84■■□□□ 1.89
UBE2D3-216ENST00000503742 NHSL1Q5SYE7 1610 aa26.83■■□□□ 1.89
UBE2D3-216ENST00000503742 F6X3S4 739 aa26.83■■□□□ 1.89
UBE2D3-216ENST00000503742 TATP17735 454 aaPredicted RBP26.83■■□□□ 1.89
UBE2D3-216ENST00000503742 HDGFL1Q5TGJ6 251 aa26.83■■□□□ 1.89
UBE2D3-216ENST00000503742 NECTIN2Q92692 538 aa26.82■■□□□ 1.88
UBE2D3-216ENST00000503742 N4BP2Q86UW6 1770 aaPredicted RBP26.82■■□□□ 1.88
UBE2D3-216ENST00000503742 CSB-PGBD3P0DP91 1061 aa26.82■■□□□ 1.88
UBE2D3-216ENST00000503742 CHD1LQ86WJ1 897 aa26.82■■□□□ 1.88
UBE2D3-216ENST00000503742 ABCA3Q99758 1704 aa26.81■■□□□ 1.88
UBE2D3-216ENST00000503742 MEIS3Q99687 375 aa26.81■■□□□ 1.88
UBE2D3-216ENST00000503742 SCN11AQ9UI33 1791 aa26.81■■□□□ 1.88
UBE2D3-216ENST00000503742 ANKRD44Q8N8A2 993 aa26.8■■□□□ 1.88
UBE2D3-216ENST00000503742 HEG1Q9ULI3 1381 aa26.8■■□□□ 1.88
UBE2D3-216ENST00000503742 RPAP2Q8IXW5 612 aaPredicted RBP26.8■■□□□ 1.88
UBE2D3-216ENST00000503742 CHMP4AQ9BY43 222 aa26.8■■□□□ 1.88
UBE2D3-216ENST00000503742 PKD1L3Q7Z443 1732 aa26.8■■□□□ 1.88
UBE2D3-216ENST00000503742 FKBP5Q13451 457 aaPredicted RBP26.79■■□□□ 1.88
UBE2D3-216ENST00000503742 SPG7Q9UQ90 795 aa26.79■■□□□ 1.88
UBE2D3-216ENST00000503742 PXDNLA1KZ92 1463 aa26.79■■□□□ 1.88
UBE2D3-216ENST00000503742 SLC4A10Q6U841 1118 aa26.78■■□□□ 1.88
UBE2D3-216ENST00000503742 NOP58Q9Y2X3 529 aaKnown RBP26.78■■□□□ 1.88
UBE2D3-216ENST00000503742 PHKG2P15735 406 aa26.78■■□□□ 1.88
UBE2D3-216ENST00000503742 KDM6AO15550 1401 aaPredicted RBP26.77■■□□□ 1.88
UBE2D3-216ENST00000503742 CEP85Q6P2H3 762 aa26.77■■□□□ 1.88
UBE2D3-216ENST00000503742 LNPKQ9C0E8 428 aa26.77■■□□□ 1.88
UBE2D3-216ENST00000503742 DCTPP1Q9H773 170 aa26.77■■□□□ 1.88
UBE2D3-216ENST00000503742 PRDM11Q9NQV5 511 aa26.76■■□□□ 1.87
UBE2D3-216ENST00000503742 ANKRD45Q5TZF3 282 aa26.75■■□□□ 1.87
UBE2D3-216ENST00000503742 SEC24BO95487 1268 aa26.74■■□□□ 1.87
UBE2D3-216ENST00000503742 EIF2S2P20042 333 aaKnown RBP26.74■■□□□ 1.87
UBE2D3-216ENST00000503742 IFNL2Q8IZJ0 200 aa26.74■■□□□ 1.87
UBE2D3-216ENST00000503742 PHAXQ9H814 394 aaKnown RBP26.74■■□□□ 1.87
UBE2D3-216ENST00000503742 ZBTB47Q9UFB7 747 aaPredicted RBP26.73■■□□□ 1.87
UBE2D3-216ENST00000503742 WDR17Q8IZU2 1322 aa26.73■■□□□ 1.87
UBE2D3-216ENST00000503742 GIGYF1O75420 1035 aaPredicted RBP26.73■■□□□ 1.87
UBE2D3-216ENST00000503742 COL5A2P05997 1499 aaPredicted RBP26.72■■□□□ 1.87
UBE2D3-216ENST00000503742 SLC52A2Q9HAB3 445 aa26.72■■□□□ 1.87
UBE2D3-216ENST00000503742 CHPF2Q9P2E5 772 aa26.72■■□□□ 1.87
UBE2D3-216ENST00000503742 MRC1P22897 1456 aa26.71■■□□□ 1.87
UBE2D3-216ENST00000503742 DDRGK1Q96HY6 314 aa26.71■■□□□ 1.87
UBE2D3-216ENST00000503742 CYP27B1O15528 508 aa26.7■■□□□ 1.86
UBE2D3-216ENST00000503742 ERICH6Q7L0X2 663 aa26.7■■□□□ 1.86
UBE2D3-216ENST00000503742 PARP4Q9UKK3 1724 aaKnown RBP26.69■■□□□ 1.86
UBE2D3-216ENST00000503742 GNAI3P08754 354 aa26.68■■□□□ 1.86
UBE2D3-216ENST00000503742 DCAF5Q96JK2 942 aa26.68■■□□□ 1.86
UBE2D3-216ENST00000503742 GNAI2P04899 355 aa26.67■■□□□ 1.86
UBE2D3-216ENST00000503742 DBF4Q9UBU7 674 aaPredicted RBP26.67■■□□□ 1.86
UBE2D3-216ENST00000503742 ZNF790Q6PG37 636 aa26.66■■□□□ 1.86
UBE2D3-216ENST00000503742 HSP90AB1P08238 724 aaKnown RBP26.66■■□□□ 1.86
UBE2D3-216ENST00000503742 TOM1L2Q6ZVM7 507 aa26.65■■□□□ 1.86
UBE2D3-216ENST00000503742 NFATC2IPQ8NCF5 419 aa26.65■■□□□ 1.86
UBE2D3-216ENST00000503742 HMMRO75330 724 aa26.64■■□□□ 1.86
UBE2D3-216ENST00000503742 PRAMEF22A3QJZ6 481 aa26.64■■□□□ 1.85
UBE2D3-216ENST00000503742 BMP2KLQ5H9B9 411 aa26.64■■□□□ 1.85
UBE2D3-216ENST00000503742 USP44Q9H0E7 712 aa26.64■■□□□ 1.85
UBE2D3-216ENST00000503742 CARD10Q9BWT7 1032 aa26.63■■□□□ 1.85
UBE2D3-216ENST00000503742 ANXA1P04083 346 aa26.62■■□□□ 1.85
UBE2D3-216ENST00000503742 SLC39A6Q13433 755 aa26.62■■□□□ 1.85
UBE2D3-216ENST00000503742 DNAAF4Q8WXU2 420 aa26.62■■□□□ 1.85
UBE2D3-216ENST00000503742 ADCY9O60503 1353 aa26.61■■□□□ 1.85
UBE2D3-216ENST00000503742 C5P01031 1676 aa26.61■■□□□ 1.85
UBE2D3-216ENST00000503742 SRCIN1Q9C0H9 1055 aa26.61■■□□□ 1.85
UBE2D3-216ENST00000503742 PI4KAP2A4QPH2 592 aa26.6■■□□□ 1.85
UBE2D3-216ENST00000503742 PI4KAP1Q8N8J0 262 aa26.6■■□□□ 1.85
UBE2D3-216ENST00000503742 PROSER3Q2NL68 480 aa26.6■■□□□ 1.85
UBE2D3-216ENST00000503742 BEND3Q5T5X7 828 aa26.6■■□□□ 1.85
UBE2D3-216ENST00000503742 ROBO1Q9Y6N7 1651 aa26.59■■□□□ 1.85
UBE2D3-216ENST00000503742 ZCRB1Q8TBF4 217 aaKnown RBP26.59■■□□□ 1.85
UBE2D3-216ENST00000503742 ATP8B2P98198 1209 aa26.58■■□□□ 1.85
UBE2D3-216ENST00000503742 PLEKHM2Q8IWE5 1019 aa26.58■■□□□ 1.85
UBE2D3-216ENST00000503742 UPF2Q9HAU5 1272 aaKnown RBP26.58■■□□□ 1.85
UBE2D3-216ENST00000503742 HYPKQ9NX55 129 aa26.58■■□□□ 1.85
UBE2D3-216ENST00000503742 PCDH11XQ9BZA7 1347 aa26.58■■□□□ 1.85
UBE2D3-216ENST00000503742 PCDH11YQ9BZA8 1340 aa26.58■■□□□ 1.85
UBE2D3-216ENST00000503742 TBC1D32Q96NH3 1257 aa26.58■■□□□ 1.85
UBE2D3-216ENST00000503742 AHDC1Q5TGY3 1603 aaPredicted RBP26.58■■□□□ 1.85
UBE2D3-216ENST00000503742 LTBP4Q8N2S1 1624 aa26.58■■□□□ 1.85
UBE2D3-216ENST00000503742 PDIA6Q15084 440 aa26.57■■□□□ 1.84
UBE2D3-216ENST00000503742 DDX21Q9NR30 783 aaKnown RBP eCLIP26.57■■□□□ 1.84
UBE2D3-216ENST00000503742 LRRFIP2Q9Y608 721 aaKnown RBP26.57■■□□□ 1.84
UBE2D3-216ENST00000503742 LARP1Q6PKG0 1096 aaKnown RBP26.57■■□□□ 1.84
UBE2D3-216ENST00000503742 SHANK3Q9BYB0 1731 aa26.56■■□□□ 1.84
UBE2D3-216ENST00000503742 UBTFL1P0CB47 393 aaPredicted RBP26.56■■□□□ 1.84
UBE2D3-216ENST00000503742 IL2RBP14784 551 aa26.56■■□□□ 1.84
UBE2D3-216ENST00000503742 ZNF496Q96IT1 587 aaPredicted RBP26.56■■□□□ 1.84
UBE2D3-216ENST00000503742 KSR2Q6VAB6 950 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms