RNA–Protein interactions for RNA: ENST00000497807.1

MACF1-225, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MACF1, Length 2,689 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-225ENST00000497807 HDGFL1Q5TGJ6 251 aa13.68□□□□□ -0.22
MACF1-225ENST00000497807 CEP126Q9P2H0 1117 aa13.68□□□□□ -0.22
MACF1-225ENST00000497807 SASS6Q6UVJ0 657 aa13.68□□□□□ -0.22
MACF1-225ENST00000497807 KRBA2Q6ZNG9 492 aa13.68□□□□□ -0.22
MACF1-225ENST00000497807 CXorf38Q8TB03 319 aa13.68□□□□□ -0.22
MACF1-225ENST00000497807 NOL10Q9BSC4 688 aaKnown RBP13.68□□□□□ -0.22
MACF1-225ENST00000497807 HIRIP3Q9BW71 556 aaPredicted RBP13.68□□□□□ -0.22
MACF1-225ENST00000497807 LRPPRCP42704 1394 aaKnown RBP13.68□□□□□ -0.22
MACF1-225ENST00000497807 TPM3P06753 285 aa13.67□□□□□ -0.22
MACF1-225ENST00000497807 ABCC11Q96J66 1382 aa13.67□□□□□ -0.22
MACF1-225ENST00000497807 ANKRD33BA6NCL7 494 aa13.67□□□□□ -0.22
MACF1-225ENST00000497807 RHBDL3P58872 404 aa13.67□□□□□ -0.22
MACF1-225ENST00000497807 TPD52L2O43399 206 aaKnown RBP13.67□□□□□ -0.22
MACF1-225ENST00000497807 RSPH14Q9UHP6 348 aa13.67□□□□□ -0.22
MACF1-225ENST00000497807 ROBO2Q9HCK4 1378 aa13.66□□□□□ -0.22
MACF1-225ENST00000497807 SF3A1Q15459 793 aaKnown RBP13.66□□□□□ -0.22
MACF1-225ENST00000497807 HELBQ8NG08 1087 aaPredicted RBP13.66□□□□□ -0.22
MACF1-225ENST00000497807 CXorf56Q9H5V9 222 aa13.66□□□□□ -0.22
MACF1-225ENST00000497807 RALGAPBQ86X10 1494 aa13.66□□□□□ -0.22
MACF1-225ENST00000497807 ST20-MTHFSA0A0A6YYL1 179 aa13.66□□□□□ -0.22
MACF1-225ENST00000497807 PNISRQ8TF01 805 aaKnown RBP13.66□□□□□ -0.22
MACF1-225ENST00000497807 ASXL1Q8IXJ9 1541 aa13.65□□□□□ -0.22
MACF1-225ENST00000497807 ADGRB1O14514 1584 aa13.65□□□□□ -0.22
MACF1-225ENST00000497807 EIF4G2P78344 907 aaKnown RBP eCLIP13.65□□□□□ -0.22
MACF1-225ENST00000497807 CCDC181Q5TID7 509 aa13.65□□□□□ -0.22
MACF1-225ENST00000497807 ERCC4Q92889 916 aaPredicted RBP13.65□□□□□ -0.22
MACF1-225ENST00000497807 GPRASP1Q5JY77 1395 aa13.64□□□□□ -0.23
MACF1-225ENST00000497807 DIP2AQ14689 1571 aa13.64□□□□□ -0.23
MACF1-225ENST00000497807 FEZ1Q99689 392 aa13.64□□□□□ -0.23
MACF1-225ENST00000497807 RANBP17Q9H2T7 1088 aaKnown RBP13.64□□□□□ -0.23
MACF1-225ENST00000497807 PLEKHH1Q9ULM0 1364 aa13.64□□□□□ -0.23
MACF1-225ENST00000497807 MSNP26038 577 aaKnown RBP13.64□□□□□ -0.23
MACF1-225ENST00000497807 GSCP56915 257 aaPredicted RBP13.64□□□□□ -0.23
MACF1-225ENST00000497807 TNPO1Q92973 898 aaKnown RBP13.64□□□□□ -0.23
MACF1-225ENST00000497807 MINK1Q8N4C8 1332 aaPredicted RBP13.64□□□□□ -0.23
MACF1-225ENST00000497807 CREBRFQ8IUR6 639 aa13.63□□□□□ -0.23
MACF1-225ENST00000497807 PHF8Q9UPP1 1060 aa13.63□□□□□ -0.23
MACF1-225ENST00000497807 FRMD4BQ9Y2L6 1034 aa13.63□□□□□ -0.23
MACF1-225ENST00000497807 TRPM1Q7Z4N2 1603 aa13.63□□□□□ -0.23
MACF1-225ENST00000497807 TMEM94Q12767 1356 aa13.63□□□□□ -0.23
MACF1-225ENST00000497807 USP47Q96K76 1375 aa13.63□□□□□ -0.23
MACF1-225ENST00000497807 SLFN14P0C7P3 912 aa13.62□□□□□ -0.23
MACF1-225ENST00000497807 HSPA5P11021 654 aaKnown RBP13.62□□□□□ -0.23
MACF1-225ENST00000497807 EVI5LQ96CN4 794 aa13.62□□□□□ -0.23
MACF1-225ENST00000497807 GRPEL1Q9HAV7 217 aa13.62□□□□□ -0.23
MACF1-225ENST00000497807 DDX49Q9Y6V7 483 aaKnown RBP13.62□□□□□ -0.23
MACF1-225ENST00000497807 CCDC196A0A1B0GTZ2 297 aa13.62□□□□□ -0.23
MACF1-225ENST00000497807 RBM5P52756 815 aaKnown RBP eCLIP13.62□□□□□ -0.23
MACF1-225ENST00000497807 EPB41L2O43491 1005 aaKnown RBP13.61□□□□□ -0.23
MACF1-225ENST00000497807 ABCD1P33897 745 aa13.61□□□□□ -0.23
MACF1-225ENST00000497807 HS1BP3Q53T59 392 aa13.61□□□□□ -0.23
MACF1-225ENST00000497807 ZKSCAN2Q63HK3 967 aa13.61□□□□□ -0.23
MACF1-225ENST00000497807 ACRBPQ8NEB7 543 aa13.61□□□□□ -0.23
MACF1-225ENST00000497807 ZCRB1Q8TBF4 217 aaKnown RBP13.61□□□□□ -0.23
MACF1-225ENST00000497807 LAMC1P11047 1609 aa13.61□□□□□ -0.23
MACF1-225ENST00000497807 H0YHG0 523 aa13.61□□□□□ -0.23
MACF1-225ENST00000497807 SARNPP82979 210 aaKnown RBP13.61□□□□□ -0.23
MACF1-225ENST00000497807 TBC1D22AQ8WUA7 517 aa13.61□□□□□ -0.23
MACF1-225ENST00000497807 TEX13AQ9BXU3 409 aaPredicted RBP13.61□□□□□ -0.23
MACF1-225ENST00000497807 MAF1Q9H063 256 aa13.61□□□□□ -0.23
MACF1-225ENST00000497807 EIF3AQ14152 1382 aaKnown RBP13.6□□□□□ -0.23
MACF1-225ENST00000497807 NUTM2FA1L443 756 aa13.6□□□□□ -0.23
MACF1-225ENST00000497807 CDC37Q16543 378 aaPredicted RBP13.6□□□□□ -0.23
MACF1-225ENST00000497807 GORABQ5T7V8 394 aa13.6□□□□□ -0.23
MACF1-225ENST00000497807 KCNV2Q8TDN2 545 aa13.6□□□□□ -0.23
MACF1-225ENST00000497807 SETD1AO15047 1707 aaKnown RBP13.6□□□□□ -0.23
MACF1-225ENST00000497807 ZRANB2O95218 330 aaKnown RBP eCLIP13.6□□□□□ -0.23
MACF1-225ENST00000497807 CCDC91Q7Z6B0 441 aa13.6□□□□□ -0.23
MACF1-225ENST00000497807 KLHL23Q8NBE8 558 aa13.6□□□□□ -0.23
MACF1-225ENST00000497807 RASSF4Q9H2L5 321 aa13.6□□□□□ -0.23
MACF1-225ENST00000497807 SYNPO2Q9UMS6 1093 aa13.6□□□□□ -0.23
MACF1-225ENST00000497807 KIAA1210Q9ULL0 1709 aa13.6□□□□□ -0.23
MACF1-225ENST00000497807 FAM184AQ8NB25 1140 aa13.59□□□□□ -0.23
MACF1-225ENST00000497807 C19orf44Q9H6X5 657 aa13.59□□□□□ -0.23
MACF1-225ENST00000497807 PPME1Q9Y570 386 aa13.59□□□□□ -0.23
MACF1-225ENST00000497807 TECPR2O15040 1411 aa13.59□□□□□ -0.23
MACF1-225ENST00000497807 CACTIN-AS1Q8N1I8 211 aa13.59□□□□□ -0.23
MACF1-225ENST00000497807 GTF2F1P35269 517 aaKnown RBP eCLIP13.58□□□□□ -0.23
MACF1-225ENST00000497807 RBM27Q9P2N5 1060 aaKnown RBP13.58□□□□□ -0.23
MACF1-225ENST00000497807 CHD2O14647 1828 aaKnown RBP13.58□□□□□ -0.24
MACF1-225ENST00000497807 TNNT1P13805 278 aa13.58□□□□□ -0.24
MACF1-225ENST00000497807 VASPP50552 380 aaPredicted RBP13.58□□□□□ -0.24
MACF1-225ENST00000497807 NEXNQ0ZGT2 675 aa13.58□□□□□ -0.24
MACF1-225ENST00000497807 TMCO4Q5TGY1 634 aa13.58□□□□□ -0.24
MACF1-225ENST00000497807 SNRNP27Q8WVK2 155 aaKnown RBP13.58□□□□□ -0.24
MACF1-225ENST00000497807 PPP1R9BQ96SB3 815 aa13.58□□□□□ -0.24
MACF1-225ENST00000497807 FAM135BQ49AJ0 1406 aa13.58□□□□□ -0.24
MACF1-225ENST00000497807 ERBB3P21860 1342 aa13.58□□□□□ -0.24
MACF1-225ENST00000497807 RGL2O15211 777 aa13.57□□□□□ -0.24
MACF1-225ENST00000497807 MARCH6O60337 910 aa13.57□□□□□ -0.24
MACF1-225ENST00000497807 ATF3P18847 181 aa13.57□□□□□ -0.24
MACF1-225ENST00000497807 MAP9Q49MG5 647 aa13.57□□□□□ -0.24
MACF1-225ENST00000497807 PTCH1Q13635 1447 aa13.57□□□□□ -0.24
MACF1-225ENST00000497807 CCDC173Q0VFZ6 552 aa13.57□□□□□ -0.24
MACF1-225ENST00000497807 ZSCAN26Q16670 478 aa13.57□□□□□ -0.24
MACF1-225ENST00000497807 RPAINQ86UA6 219 aa13.57□□□□□ -0.24
MACF1-225ENST00000497807 CADPS2Q86UW7 1296 aa13.57□□□□□ -0.24
MACF1-225ENST00000497807 ZNF710Q8N1W2 664 aa13.57□□□□□ -0.24
MACF1-225ENST00000497807 MYRIPQ8NFW9 859 aa13.57□□□□□ -0.24
MACF1-225ENST00000497807 UPF2Q9HAU5 1272 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms