RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 NOP53Q9NZM5 478 aaKnown RBP7.87□□□□□ -1.15
PHC3-216ENST00000497171 GNB5O14775 395 aa7.86□□□□□ -1.15
PHC3-216ENST00000497171 BMP4P12644 408 aa7.86□□□□□ -1.15
PHC3-216ENST00000497171 EFHC2Q5JST6 749 aa7.86□□□□□ -1.15
PHC3-216ENST00000497171 FBXO31Q5XUX0 539 aaPredicted RBP7.86□□□□□ -1.15
PHC3-216ENST00000497171 PCDHB11Q9Y5F2 797 aa7.86□□□□□ -1.15
PHC3-216ENST00000497171 GNRH1P01148 92 aa7.85□□□□□ -1.15
PHC3-216ENST00000497171 RFC5P40937 340 aa7.85□□□□□ -1.15
PHC3-216ENST00000497171 ATXN7L1Q9ULK2 861 aaPredicted RBP7.85□□□□□ -1.15
PHC3-216ENST00000497171 MYCP01106 439 aaPredicted RBP7.84□□□□□ -1.15
PHC3-216ENST00000497171 FBXO45P0C2W1 286 aa7.84□□□□□ -1.15
PHC3-216ENST00000497171 COL8A1P27658 744 aa7.84□□□□□ -1.15
PHC3-216ENST00000497171 SLCO4C1Q6ZQN7 724 aa7.84□□□□□ -1.15
PHC3-216ENST00000497171 ZSCAN10Q96SZ4 725 aaPredicted RBP7.84□□□□□ -1.15
PHC3-216ENST00000497171 KDM4CQ9H3R0 1056 aa7.84□□□□□ -1.15
PHC3-216ENST00000497171 PHKA2P46019 1235 aa7.83□□□□□ -1.16
PHC3-216ENST00000497171 TMEM259Q4ZIN3 620 aa7.83□□□□□ -1.16
PHC3-216ENST00000497171 TMEM214Q6NUQ4 689 aaKnown RBP7.83□□□□□ -1.16
PHC3-216ENST00000497171 CNKSR1Q969H4 720 aa7.83□□□□□ -1.16
PHC3-216ENST00000497171 ESYT1Q9BSJ8 1104 aa7.83□□□□□ -1.16
PHC3-216ENST00000497171 RAB6BQ9NRW1 208 aa7.83□□□□□ -1.16
PHC3-216ENST00000497171 SCTRP47872 440 aa7.82□□□□□ -1.16
PHC3-216ENST00000497171 PSMG3-AS1Q96PY0 264 aa7.82□□□□□ -1.16
PHC3-216ENST00000497171 TRIM34Q9BYJ4 488 aa7.82□□□□□ -1.16
PHC3-216ENST00000497171 KRTAP4-8Q9BYQ9 185 aa7.82□□□□□ -1.16
PHC3-216ENST00000497171 FAM117AQ9C073 453 aa7.82□□□□□ -1.16
PHC3-216ENST00000497171 CENPCQ03188 943 aa7.81□□□□□ -1.16
PHC3-216ENST00000497171 OSBPL3Q9H4L5 887 aa7.81□□□□□ -1.16
PHC3-216ENST00000497171 C1QTNF9BB2RNN3 333 aa7.8□□□□□ -1.16
PHC3-216ENST00000497171 TRAK2O60296 914 aa7.8□□□□□ -1.16
PHC3-216ENST00000497171 FGFR3P22607 806 aa7.8□□□□□ -1.16
PHC3-216ENST00000497171 NR1H3Q13133 447 aa7.8□□□□□ -1.16
PHC3-216ENST00000497171 ESCO1Q5FWF5 840 aa7.8□□□□□ -1.16
PHC3-216ENST00000497171 RUBCNLQ9H714 662 aa7.8□□□□□ -1.16
PHC3-216ENST00000497171 GGA1Q9UJY5 639 aa7.8□□□□□ -1.16
PHC3-216ENST00000497171 FIGNL1Q6PIW4 674 aa7.79□□□□□ -1.16
PHC3-216ENST00000497171 C1orf229Q6ZS94 237 aaPredicted RBP7.79□□□□□ -1.16
PHC3-216ENST00000497171 ABHD17AQ96GS6 310 aa7.79□□□□□ -1.16
PHC3-216ENST00000497171 PCMTD1Q96MG8 357 aaPredicted RBP7.79□□□□□ -1.16
PHC3-216ENST00000497171 SUV39H2Q9H5I1 410 aa7.79□□□□□ -1.16
PHC3-216ENST00000497171 GPBP1L1Q9HC44 474 aaPredicted RBP7.79□□□□□ -1.16
PHC3-216ENST00000497171 EPXP11678 715 aa7.78□□□□□ -1.16
PHC3-216ENST00000497171 LINC00114Q6XXX2 140 aa7.78□□□□□ -1.16
PHC3-216ENST00000497171 CD163Q86VB7 1156 aa7.78□□□□□ -1.16
PHC3-216ENST00000497171 IL2RAP01589 272 aa7.77□□□□□ -1.17
PHC3-216ENST00000497171 ARAFP10398 606 aa7.77□□□□□ -1.17
PHC3-216ENST00000497171 MSX1P28360 303 aa7.77□□□□□ -1.17
PHC3-216ENST00000497171 RNF135Q8IUD6 432 aa7.77□□□□□ -1.17
PHC3-216ENST00000497171 BTBD6Q96KE9 485 aa7.77□□□□□ -1.17
PHC3-216ENST00000497171 SEMA6BQ9H3T3 888 aa7.77□□□□□ -1.17
PHC3-216ENST00000497171 THBS1P07996 1170 aa7.76□□□□□ -1.17
PHC3-216ENST00000497171 ZMYM1Q5SVZ6 1142 aa7.76□□□□□ -1.17
PHC3-216ENST00000497171 C4orf17Q53FE4 359 aa7.75□□□□□ -1.17
PHC3-216ENST00000497171 TBC1D9Q6ZT07 1266 aa7.75□□□□□ -1.17
PHC3-216ENST00000497171 RHBDD1Q8TEB9 315 aa7.75□□□□□ -1.17
PHC3-216ENST00000497171 SCO2A0A1W2PP80 73 aa7.74□□□□□ -1.17
PHC3-216ENST00000497171 NEURL1BA8MQ27 555 aa7.74□□□□□ -1.17
PHC3-216ENST00000497171 APBB1O00213 710 aa7.74□□□□□ -1.17
PHC3-216ENST00000497171 ADH6P28332 368 aa7.74□□□□□ -1.17
PHC3-216ENST00000497171 CHRNA4P43681 627 aa7.74□□□□□ -1.17
PHC3-216ENST00000497171 DGKGP49619 791 aa7.74□□□□□ -1.17
PHC3-216ENST00000497171 XAGE2Q96GT9 111 aa7.74□□□□□ -1.17
PHC3-216ENST00000497171 SPDYE3A6NKU9 549 aa7.73□□□□□ -1.17
PHC3-216ENST00000497171 C2CD2LO14523 706 aa7.73□□□□□ -1.17
PHC3-216ENST00000497171 BNIP3LO60238 219 aa7.73□□□□□ -1.17
PHC3-216ENST00000497171 CTBSQ01459 385 aa7.73□□□□□ -1.17
PHC3-216ENST00000497171 UBAP2LQ14157 1087 aaKnown RBP7.73□□□□□ -1.17
PHC3-216ENST00000497171 CRISPLD1Q9H336 500 aa7.73□□□□□ -1.17
PHC3-216ENST00000497171 PCDHGC4Q9Y5F7 938 aa7.73□□□□□ -1.17
PHC3-216ENST00000497171 HOXB4P17483 251 aaPredicted RBP7.72□□□□□ -1.17
PHC3-216ENST00000497171 GATA4P43694 442 aa7.72□□□□□ -1.17
PHC3-216ENST00000497171 DOC2BQ14184 412 aa7.72□□□□□ -1.17
PHC3-216ENST00000497171 TLR1Q15399 786 aa7.72□□□□□ -1.17
PHC3-216ENST00000497171 CHSY3Q70JA7 882 aa7.72□□□□□ -1.17
PHC3-216ENST00000497171 C1orf216Q8TAB5 229 aa7.72□□□□□ -1.17
PHC3-216ENST00000497171 GJD4Q96KN9 370 aaPredicted RBP7.72□□□□□ -1.17
PHC3-216ENST00000497171 GOPCQ9HD26 462 aa7.72□□□□□ -1.17
PHC3-216ENST00000497171 FHDC1Q9C0D6 1143 aaPredicted RBP7.71□□□□□ -1.18
PHC3-216ENST00000497171 NDFIP2Q9NV92 336 aa7.71□□□□□ -1.18
PHC3-216ENST00000497171 SPATA31C1P0DKV0 1188 aa7.7□□□□□ -1.18
PHC3-216ENST00000497171 PLA2G4AP47712 749 aa7.7□□□□□ -1.18
PHC3-216ENST00000497171 NLRP8Q86W28 1048 aa7.7□□□□□ -1.18
PHC3-216ENST00000497171 PPARGC1BQ86YN6 1023 aaKnown RBP7.7□□□□□ -1.18
PHC3-216ENST00000497171 AVENQ9NQS1 362 aaPredicted RBP7.7□□□□□ -1.18
PHC3-216ENST00000497171 HRH3Q9Y5N1 445 aa7.7□□□□□ -1.18
PHC3-216ENST00000497171 NDUFB9Q9Y6M9 179 aa7.7□□□□□ -1.18
PHC3-216ENST00000497171 ATXN7O15265 892 aaPredicted RBP7.69□□□□□ -1.18
PHC3-216ENST00000497171 USP4Q13107 963 aa7.69□□□□□ -1.18
PHC3-216ENST00000497171 SIRT1Q96EB6 747 aa7.69□□□□□ -1.18
PHC3-216ENST00000497171 ZCCHC2Q9C0B9 1178 aaKnown RBP7.69□□□□□ -1.18
PHC3-216ENST00000497171 PRRT3Q5FWE3 981 aa7.68□□□□□ -1.18
PHC3-216ENST00000497171 PRR12Q9ULL5 1215 aa7.68□□□□□ -1.18
PHC3-216ENST00000497171 DOLKQ9UPQ8 538 aa7.68□□□□□ -1.18
PHC3-216ENST00000497171 NBPF1Q3BBV0 1214 aa7.67□□□□□ -1.18
PHC3-216ENST00000497171 FAM182BQ5T319 152 aa7.67□□□□□ -1.18
PHC3-216ENST00000497171 AIDAQ96BJ3 306 aa7.67□□□□□ -1.18
PHC3-216ENST00000497171 GJA3Q9Y6H8 435 aa7.67□□□□□ -1.18
PHC3-216ENST00000497171 DCDC2BA2VCK2 349 aa7.66□□□□□ -1.18
PHC3-216ENST00000497171 KHNYNO15037 678 aaKnown RBP7.66□□□□□ -1.18
PHC3-216ENST00000497171 APBA3O96018 575 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms