RNA–Protein interactions for RNA: ENST00000497080.1

RAB3GAP1-206, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5

Gene RAB3GAP1, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-206ENST00000497080 FNBP4Q8N3X1 1017 aaPredicted RBP9.6□□□□□ -0.87
RAB3GAP1-206ENST00000497080 PCDHGA11Q9Y5H2 935 aa9.6□□□□□ -0.87
RAB3GAP1-206ENST00000497080 NCOA4Q13772 614 aa9.59□□□□□ -0.87
RAB3GAP1-206ENST00000497080 TLR1Q15399 786 aa9.59□□□□□ -0.87
RAB3GAP1-206ENST00000497080 GNASQ5JWF2 1037 aa9.59□□□□□ -0.87
RAB3GAP1-206ENST00000497080 PROSER2Q86WR7 435 aaPredicted RBP9.59□□□□□ -0.87
RAB3GAP1-206ENST00000497080 SERTAD1Q9UHV2 236 aa9.59□□□□□ -0.87
RAB3GAP1-206ENST00000497080 NOD1Q9Y239 953 aa9.59□□□□□ -0.87
RAB3GAP1-206ENST00000497080 LZTS3O60299 673 aaPredicted RBP9.58□□□□□ -0.88
RAB3GAP1-206ENST00000497080 F11P03951 625 aa9.58□□□□□ -0.88
RAB3GAP1-206ENST00000497080 C4orf17Q53FE4 359 aa9.58□□□□□ -0.88
RAB3GAP1-206ENST00000497080 TBC1D9Q6ZT07 1266 aa9.58□□□□□ -0.88
RAB3GAP1-206ENST00000497080 ZNF837Q96EG3 531 aaPredicted RBP9.58□□□□□ -0.88
RAB3GAP1-206ENST00000497080 FAM181BA6NEQ2 426 aa9.57□□□□□ -0.88
RAB3GAP1-206ENST00000497080 USP17L5A8MUK1 530 aa9.57□□□□□ -0.88
RAB3GAP1-206ENST00000497080 TMEM229AB2RXF0 380 aa9.57□□□□□ -0.88
RAB3GAP1-206ENST00000497080 PPARGC1BQ86YN6 1023 aaKnown RBP9.57□□□□□ -0.88
RAB3GAP1-206ENST00000497080 GMCL1Q96IK5 515 aa9.57□□□□□ -0.88
RAB3GAP1-206ENST00000497080 GPAMQ9HCL2 828 aa9.57□□□□□ -0.88
RAB3GAP1-206ENST00000497080 H7C1W4 665 aa9.56□□□□□ -0.88
RAB3GAP1-206ENST00000497080 GPR25O00155 361 aa9.56□□□□□ -0.88
RAB3GAP1-206ENST00000497080 SMTNP53814 917 aa9.56□□□□□ -0.88
RAB3GAP1-206ENST00000497080 GTF2IP78347 998 aa9.56□□□□□ -0.88
RAB3GAP1-206ENST00000497080 GTPBP3Q969Y2 492 aaKnown RBP9.56□□□□□ -0.88
RAB3GAP1-206ENST00000497080 UCN2Q96RP3 112 aa9.56□□□□□ -0.88
RAB3GAP1-206ENST00000497080 FOXR1Q6PIV2 292 aa9.55□□□□□ -0.88
RAB3GAP1-206ENST00000497080 RHBDD1Q8TEB9 315 aa9.55□□□□□ -0.88
RAB3GAP1-206ENST00000497080 A0A1B0GTH6 734 aa9.54□□□□□ -0.88
RAB3GAP1-206ENST00000497080 A6NJR5 290 aa9.54□□□□□ -0.88
RAB3GAP1-206ENST00000497080 PSME1Q06323 249 aa9.54□□□□□ -0.88
RAB3GAP1-206ENST00000497080 GAS6Q14393 721 aa9.54□□□□□ -0.88
RAB3GAP1-206ENST00000497080 SLC4A9Q96Q91 983 aa9.54□□□□□ -0.88
RAB3GAP1-206ENST00000497080 MSX1P28360 303 aa9.53□□□□□ -0.88
RAB3GAP1-206ENST00000497080 GLMNQ92990 594 aa9.53□□□□□ -0.88
RAB3GAP1-206ENST00000497080 NUCKS1Q9H1E3 243 aaKnown RBP9.53□□□□□ -0.88
RAB3GAP1-206ENST00000497080 USP17L3A6NCW0 530 aa9.52□□□□□ -0.89
RAB3GAP1-206ENST00000497080 USP17L4A6NCW7 530 aa9.52□□□□□ -0.89
RAB3GAP1-206ENST00000497080 A6NJY4 79 aa9.52□□□□□ -0.89
RAB3GAP1-206ENST00000497080 ATP9BO43861 1147 aa9.52□□□□□ -0.89
RAB3GAP1-206ENST00000497080 USP17L2Q6R6M4 530 aa9.52□□□□□ -0.89
RAB3GAP1-206ENST00000497080 USP17L1Q7RTZ2 530 aa9.52□□□□□ -0.89
RAB3GAP1-206ENST00000497080 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.52□□□□□ -0.89
RAB3GAP1-206ENST00000497080 SLURP2P0DP57 97 aa9.51□□□□□ -0.89
RAB3GAP1-206ENST00000497080 PLA2G4AP47712 749 aa9.51□□□□□ -0.89
RAB3GAP1-206ENST00000497080 PLEKHM2Q8IWE5 1019 aa9.51□□□□□ -0.89
RAB3GAP1-206ENST00000497080 WHAMMQ8TF30 809 aa9.51□□□□□ -0.89
RAB3GAP1-206ENST00000497080 NIFKQ9BYG3 293 aaKnown RBP9.51□□□□□ -0.89
RAB3GAP1-206ENST00000497080 RUBCNLQ9H714 662 aa9.51□□□□□ -0.89
RAB3GAP1-206ENST00000497080 TFIP11Q9UBB9 837 aaKnown RBP9.51□□□□□ -0.89
RAB3GAP1-206ENST00000497080 CDK2AP1O14519 115 aa9.5□□□□□ -0.89
RAB3GAP1-206ENST00000497080 ZBTB7BO15156 539 aaPredicted RBP9.5□□□□□ -0.89
RAB3GAP1-206ENST00000497080 ADAMTS2O95450 1211 aa9.5□□□□□ -0.89
RAB3GAP1-206ENST00000497080 THBS1P07996 1170 aa9.5□□□□□ -0.89
RAB3GAP1-206ENST00000497080 TRIM50Q86XT4 487 aa9.5□□□□□ -0.89
RAB3GAP1-206ENST00000497080 AIDAQ96BJ3 306 aa9.5□□□□□ -0.89
RAB3GAP1-206ENST00000497080 TRERF1Q96PN7 1200 aa9.5□□□□□ -0.89
RAB3GAP1-206ENST00000497080 ZNF358Q9NW07 568 aa9.5□□□□□ -0.89
RAB3GAP1-206ENST00000497080 MKRN1Q9UHC7 482 aaKnown RBP9.5□□□□□ -0.89
RAB3GAP1-206ENST00000497080 USP3Q9Y6I4 520 aa9.5□□□□□ -0.89
RAB3GAP1-206ENST00000497080 BACH1O14867 736 aa9.49□□□□□ -0.89
RAB3GAP1-206ENST00000497080 CSB-PGBD3P0DP91 1061 aa9.49□□□□□ -0.89
RAB3GAP1-206ENST00000497080 SRSF11Q05519 484 aaKnown RBP9.49□□□□□ -0.89
RAB3GAP1-206ENST00000497080 MTFR1Q15390 333 aa9.49□□□□□ -0.89
RAB3GAP1-206ENST00000497080 PGBD3Q8N328 593 aa9.49□□□□□ -0.89
RAB3GAP1-206ENST00000497080 CALR3Q96L12 384 aaKnown RBP9.49□□□□□ -0.89
RAB3GAP1-206ENST00000497080 IQSEC3Q9UPP2 1182 aaPredicted RBP9.49□□□□□ -0.89
RAB3GAP1-206ENST00000497080 CLDN10P78369 228 aa9.48□□□□□ -0.89
RAB3GAP1-206ENST00000497080 ZNF385CQ66K41 422 aaPredicted RBP9.48□□□□□ -0.89
RAB3GAP1-206ENST00000497080 KIAA1024Q9UPX6 916 aa9.48□□□□□ -0.89
RAB3GAP1-206ENST00000497080 CCDC102BQ68D86 513 aa9.47□□□□□ -0.89
RAB3GAP1-206ENST00000497080 ZNF295-AS1Q8N0V1 137 aa9.47□□□□□ -0.89
RAB3GAP1-206ENST00000497080 SVOPQ8N4V2 548 aa9.47□□□□□ -0.89
RAB3GAP1-206ENST00000497080 TPCN2Q8NHX9 752 aa9.47□□□□□ -0.89
RAB3GAP1-206ENST00000497080 MBIPQ9NS73 344 aa9.47□□□□□ -0.89
RAB3GAP1-206ENST00000497080 DNAAF2Q9NVR5 837 aaKnown RBP9.47□□□□□ -0.89
RAB3GAP1-206ENST00000497080 CABP1Q9NZU7 370 aa9.47□□□□□ -0.89
RAB3GAP1-206ENST00000497080 ATP1A2P50993 1020 aa9.46□□□□□ -0.9
RAB3GAP1-206ENST00000497080 LYPD4Q6UWN0 246 aa9.46□□□□□ -0.9
RAB3GAP1-206ENST00000497080 TNS4Q8IZW8 715 aa9.46□□□□□ -0.9
RAB3GAP1-206ENST00000497080 OGFOD1Q8N543 542 aa9.46□□□□□ -0.9
RAB3GAP1-206ENST00000497080 ZNF777Q9ULD5 760 aaPredicted RBP9.46□□□□□ -0.9
RAB3GAP1-206ENST00000497080 PARP3Q9Y6F1 533 aa9.46□□□□□ -0.9
RAB3GAP1-206ENST00000497080 PALM3A6NDB9 673 aaPredicted RBP9.45□□□□□ -0.9
RAB3GAP1-206ENST00000497080 MX2P20592 715 aa9.45□□□□□ -0.9
RAB3GAP1-206ENST00000497080 UBAP2LQ14157 1087 aaKnown RBP9.45□□□□□ -0.9
RAB3GAP1-206ENST00000497080 EFHC2Q5JST6 749 aa9.45□□□□□ -0.9
RAB3GAP1-206ENST00000497080 SCHIP1Q9P0W5 487 aaPredicted RBP9.45□□□□□ -0.9
RAB3GAP1-206ENST00000497080 ADAMTS8Q9UP79 889 aa9.45□□□□□ -0.9
RAB3GAP1-206ENST00000497080 IGF1RP08069 1367 aa9.45□□□□□ -0.9
RAB3GAP1-206ENST00000497080 TBCELQ5QJ74 424 aa9.44□□□□□ -0.9
RAB3GAP1-206ENST00000497080 LARGE2Q8N3Y3 721 aa9.44□□□□□ -0.9
RAB3GAP1-206ENST00000497080 CFHR5Q9BXR6 569 aa9.44□□□□□ -0.9
RAB3GAP1-206ENST00000497080 PPP1R12CQ9BZL4 782 aa9.44□□□□□ -0.9
RAB3GAP1-206ENST00000497080 CRISPLD1Q9H336 500 aa9.44□□□□□ -0.9
RAB3GAP1-206ENST00000497080 MAFBQ9Y5Q3 323 aaPredicted RBP9.44□□□□□ -0.9
RAB3GAP1-206ENST00000497080 ATP4AP20648 1035 aa9.43□□□□□ -0.9
RAB3GAP1-206ENST00000497080 LBRQ14739 615 aaKnown RBP9.43□□□□□ -0.9
RAB3GAP1-206ENST00000497080 ZNF594Q96JF6 807 aaPredicted RBP9.43□□□□□ -0.9
RAB3GAP1-206ENST00000497080 ARHGEF15O94989 841 aa9.42□□□□□ -0.9
RAB3GAP1-206ENST00000497080 CELA2BP08218 269 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms