RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 PLEKHM2Q8IWE5 1019 aa11.37□□□□□ -0.59
MDM2-220ENST00000496959 CALR3Q96L12 384 aaKnown RBP11.37□□□□□ -0.59
MDM2-220ENST00000496959 GAS2L1Q99501 681 aaPredicted RBP11.37□□□□□ -0.59
MDM2-220ENST00000496959 PSME1Q06323 249 aa11.36□□□□□ -0.59
MDM2-220ENST00000496959 RIPOR1Q6ZS17 1223 aa11.36□□□□□ -0.59
MDM2-220ENST00000496959 TRIM50Q86XT4 487 aa11.36□□□□□ -0.59
MDM2-220ENST00000496959 GPR161Q8N6U8 529 aaKnown RBP11.36□□□□□ -0.59
MDM2-220ENST00000496959 GMCL1Q96IK5 515 aa11.36□□□□□ -0.59
MDM2-220ENST00000496959 USP17L3A6NCW0 530 aa11.35□□□□□ -0.59
MDM2-220ENST00000496959 USP17L4A6NCW7 530 aa11.35□□□□□ -0.59
MDM2-220ENST00000496959 H7C1W4 665 aa11.35□□□□□ -0.59
MDM2-220ENST00000496959 PHKA2P46019 1235 aa11.35□□□□□ -0.59
MDM2-220ENST00000496959 USP17L2Q6R6M4 530 aa11.35□□□□□ -0.59
MDM2-220ENST00000496959 USP17L1Q7RTZ2 530 aa11.35□□□□□ -0.59
MDM2-220ENST00000496959 PPARGC1BQ86YN6 1023 aaKnown RBP11.35□□□□□ -0.59
MDM2-220ENST00000496959 TMEM229AB2RXF0 380 aa11.34□□□□□ -0.59
MDM2-220ENST00000496959 ATP1A2P50993 1020 aa11.34□□□□□ -0.59
MDM2-220ENST00000496959 SMTNP53814 917 aa11.34□□□□□ -0.59
MDM2-220ENST00000496959 TRIM22Q8IYM9 498 aa11.34□□□□□ -0.59
MDM2-220ENST00000496959 RHBDD1Q8TEB9 315 aa11.34□□□□□ -0.59
MDM2-220ENST00000496959 SERTAD1Q9UHV2 236 aa11.34□□□□□ -0.59
MDM2-220ENST00000496959 BACH1O14867 736 aa11.33□□□□□ -0.6
MDM2-220ENST00000496959 CUEDC1Q9NWM3 386 aaPredicted RBP11.33□□□□□ -0.6
MDM2-220ENST00000496959 A0A1B0GTH6 734 aa11.32□□□□□ -0.6
MDM2-220ENST00000496959 F11P03951 625 aa11.32□□□□□ -0.6
MDM2-220ENST00000496959 C4orf17Q53FE4 359 aa11.32□□□□□ -0.6
MDM2-220ENST00000496959 ZSCAN1Q8NBB4 408 aa11.32□□□□□ -0.6
MDM2-220ENST00000496959 SLC4A9Q96Q91 983 aa11.32□□□□□ -0.6
MDM2-220ENST00000496959 COL25A1Q9BXS0 654 aaPredicted RBP11.32□□□□□ -0.6
MDM2-220ENST00000496959 TFIP11Q9UBB9 837 aaKnown RBP11.32□□□□□ -0.6
MDM2-220ENST00000496959 FOXR1Q6PIV2 292 aa11.31□□□□□ -0.6
MDM2-220ENST00000496959 MKRN1Q9UHC7 482 aaKnown RBP11.31□□□□□ -0.6
MDM2-220ENST00000496959 A6NJY4 79 aa11.3□□□□□ -0.6
MDM2-220ENST00000496959 DBN1Q16643 649 aa11.3□□□□□ -0.6
MDM2-220ENST00000496959 CNTNAP3BQ96NU0 1288 aa11.3□□□□□ -0.6
MDM2-220ENST00000496959 CNTNAP3Q9BZ76 1288 aa11.3□□□□□ -0.6
MDM2-220ENST00000496959 STK17AQ9UEE5 414 aa11.3□□□□□ -0.6
MDM2-220ENST00000496959 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.29□□□□□ -0.6
MDM2-220ENST00000496959 ZNF837Q96EG3 531 aaPredicted RBP11.29□□□□□ -0.6
MDM2-220ENST00000496959 NIFKQ9BYG3 293 aaKnown RBP11.29□□□□□ -0.6
MDM2-220ENST00000496959 ZNF777Q9ULD5 760 aaPredicted RBP11.29□□□□□ -0.6
MDM2-220ENST00000496959 GTF3C3Q9Y5Q9 886 aa11.29□□□□□ -0.6
MDM2-220ENST00000496959 PALM3A6NDB9 673 aaPredicted RBP11.28□□□□□ -0.6
MDM2-220ENST00000496959 FAM181BA6NEQ2 426 aa11.28□□□□□ -0.6
MDM2-220ENST00000496959 MTFR1Q15390 333 aa11.28□□□□□ -0.6
MDM2-220ENST00000496959 PPP1R12CQ9BZL4 782 aa11.28□□□□□ -0.6
MDM2-220ENST00000496959 DNAAF2Q9NVR5 837 aaKnown RBP11.28□□□□□ -0.6
MDM2-220ENST00000496959 ZNF358Q9NW07 568 aa11.28□□□□□ -0.6
MDM2-220ENST00000496959 CDK2AP1O14519 115 aa11.27□□□□□ -0.61
MDM2-220ENST00000496959 CSB-PGBD3P0DP91 1061 aa11.27□□□□□ -0.61
MDM2-220ENST00000496959 KRT76Q01546 638 aa11.27□□□□□ -0.61
MDM2-220ENST00000496959 PGBD3Q8N328 593 aa11.27□□□□□ -0.61
MDM2-220ENST00000496959 OGFOD1Q8N543 542 aa11.27□□□□□ -0.61
MDM2-220ENST00000496959 NUCKS1Q9H1E3 243 aaKnown RBP11.27□□□□□ -0.61
MDM2-220ENST00000496959 GPAMQ9HCL2 828 aa11.27□□□□□ -0.61
MDM2-220ENST00000496959 MAFBQ9Y5Q3 323 aaPredicted RBP11.27□□□□□ -0.61
MDM2-220ENST00000496959 ZBTB7BO15156 539 aaPredicted RBP11.26□□□□□ -0.61
MDM2-220ENST00000496959 PLA2G4AP47712 749 aa11.26□□□□□ -0.61
MDM2-220ENST00000496959 CLDN10P78369 228 aa11.26□□□□□ -0.61
MDM2-220ENST00000496959 CCDC102BQ68D86 513 aa11.26□□□□□ -0.61
MDM2-220ENST00000496959 LARGE2Q8N3Y3 721 aa11.26□□□□□ -0.61
MDM2-220ENST00000496959 TPCN2Q8NHX9 752 aa11.26□□□□□ -0.61
MDM2-220ENST00000496959 TRERF1Q96PN7 1200 aa11.26□□□□□ -0.61
MDM2-220ENST00000496959 RBM19Q9Y4C8 960 aaKnown RBP11.26□□□□□ -0.61
MDM2-220ENST00000496959 MSX1P28360 303 aa11.25□□□□□ -0.61
MDM2-220ENST00000496959 RNFT1Q5M7Z0 435 aa11.25□□□□□ -0.61
MDM2-220ENST00000496959 GTPBP3Q969Y2 492 aaKnown RBP11.25□□□□□ -0.61
MDM2-220ENST00000496959 LORP23490 312 aaPredicted RBP11.24□□□□□ -0.61
MDM2-220ENST00000496959 AIDAQ96BJ3 306 aa11.24□□□□□ -0.61
MDM2-220ENST00000496959 ZMYND15Q9H091 742 aa11.24□□□□□ -0.61
MDM2-220ENST00000496959 CABP1Q9NZU7 370 aa11.24□□□□□ -0.61
MDM2-220ENST00000496959 KIAA1024Q9UPX6 916 aa11.24□□□□□ -0.61
MDM2-220ENST00000496959 GPR25O00155 361 aa11.23□□□□□ -0.61
MDM2-220ENST00000496959 RASA1P20936 1047 aa11.23□□□□□ -0.61
MDM2-220ENST00000496959 LBRQ14739 615 aaKnown RBP11.23□□□□□ -0.61
MDM2-220ENST00000496959 IQSEC3Q9UPP2 1182 aaPredicted RBP11.23□□□□□ -0.61
MDM2-220ENST00000496959 LMOD1P29536 600 aaPredicted RBP11.22□□□□□ -0.61
MDM2-220ENST00000496959 EFHC2Q5JST6 749 aa11.22□□□□□ -0.61
MDM2-220ENST00000496959 C1orf216Q8TAB5 229 aa11.22□□□□□ -0.61
MDM2-220ENST00000496959 RUBCNLQ9H714 662 aa11.22□□□□□ -0.61
MDM2-220ENST00000496959 SCHIP1Q9P0W5 487 aaPredicted RBP11.22□□□□□ -0.61
MDM2-220ENST00000496959 NBPF1Q3BBV0 1214 aa11.21□□□□□ -0.61
MDM2-220ENST00000496959 LARP1Q6PKG0 1096 aaKnown RBP11.21□□□□□ -0.61
MDM2-220ENST00000496959 SIX5Q8N196 739 aa11.21□□□□□ -0.61
MDM2-220ENST00000496959 ZNF594Q96JF6 807 aaPredicted RBP11.21□□□□□ -0.61
MDM2-220ENST00000496959 GAS6Q14393 721 aa11.2□□□□□ -0.62
MDM2-220ENST00000496959 VRTNQ9H8Y1 702 aa11.2□□□□□ -0.62
MDM2-220ENST00000496959 USP3Q9Y6I4 520 aa11.2□□□□□ -0.62
MDM2-220ENST00000496959 M0R2N6 131 aa11.19□□□□□ -0.62
MDM2-220ENST00000496959 SRSF11Q05519 484 aaKnown RBP11.19□□□□□ -0.62
MDM2-220ENST00000496959 TNS4Q8IZW8 715 aa11.19□□□□□ -0.62
MDM2-220ENST00000496959 ZNF295-AS1Q8N0V1 137 aa11.19□□□□□ -0.62
MDM2-220ENST00000496959 CRISPLD1Q9H336 500 aa11.19□□□□□ -0.62
MDM2-220ENST00000496959 MBIPQ9NS73 344 aa11.19□□□□□ -0.62
MDM2-220ENST00000496959 SLURP2P0DP57 97 aa11.18□□□□□ -0.62
MDM2-220ENST00000496959 TATP17735 454 aaPredicted RBP11.18□□□□□ -0.62
MDM2-220ENST00000496959 EPHA4P54764 986 aa11.18□□□□□ -0.62
MDM2-220ENST00000496959 CFHR5Q9BXR6 569 aa11.18□□□□□ -0.62
MDM2-220ENST00000496959 ZDHHC3Q9NYG2 299 aa11.18□□□□□ -0.62
MDM2-220ENST00000496959 PHF24Q9UPV7 400 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms