RNA–Protein interactions for RNA: ENST00000496427.5

CHCHD3-206, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5

Gene CHCHD3, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-206ENST00000496427 FAM208AQ9UK61 1670 aaKnown RBP10.02□□□□□ -0.8
CHCHD3-206ENST00000496427 C11orf95C9JLR9 678 aaPredicted RBP10.02□□□□□ -0.81
CHCHD3-206ENST00000496427 CSB-PGBD3P0DP91 1061 aa10.02□□□□□ -0.81
CHCHD3-206ENST00000496427 TXNRD1Q16881 649 aa10.02□□□□□ -0.81
CHCHD3-206ENST00000496427 ACSBG1Q96GR2 724 aa10.02□□□□□ -0.81
CHCHD3-206ENST00000496427 FHDC1Q9C0D6 1143 aaPredicted RBP10.02□□□□□ -0.81
CHCHD3-206ENST00000496427 STK32BQ9NY57 414 aa10.02□□□□□ -0.81
CHCHD3-206ENST00000496427 TTC21BQ7Z4L5 1316 aa10.02□□□□□ -0.81
CHCHD3-206ENST00000496427 SLC15A2Q16348 729 aa10.01□□□□□ -0.81
CHCHD3-206ENST00000496427 ARHGEF25Q86VW2 580 aa10.01□□□□□ -0.81
CHCHD3-206ENST00000496427 ZNF784Q8NCA9 323 aaPredicted RBP10.01□□□□□ -0.81
CHCHD3-206ENST00000496427 CARD10Q9BWT7 1032 aa10.01□□□□□ -0.81
CHCHD3-206ENST00000496427 RIOK3O14730 519 aaKnown RBP10□□□□□ -0.81
CHCHD3-206ENST00000496427 GPR153Q6NV75 609 aa9.99□□□□□ -0.81
CHCHD3-206ENST00000496427 TMEM92Q6UXU6 159 aa9.99□□□□□ -0.81
CHCHD3-206ENST00000496427 SYT17Q9BSW7 474 aa9.99□□□□□ -0.81
CHCHD3-206ENST00000496427 EVC2Q86UK5 1308 aa9.99□□□□□ -0.81
CHCHD3-206ENST00000496427 KTN1Q86UP2 1357 aaKnown RBP9.99□□□□□ -0.81
CHCHD3-206ENST00000496427 CCDC7Q96M83 1385 aa9.99□□□□□ -0.81
CHCHD3-206ENST00000496427 TAF1LQ8IZX4 1826 aa9.98□□□□□ -0.81
CHCHD3-206ENST00000496427 EXOC5O00471 708 aa9.98□□□□□ -0.81
CHCHD3-206ENST00000496427 ZNF827Q17R98 1081 aa9.98□□□□□ -0.81
CHCHD3-206ENST00000496427 CDCA7Q9BWT1 371 aaPredicted RBP9.98□□□□□ -0.81
CHCHD3-206ENST00000496427 MTFR1LQ9H019 292 aa9.98□□□□□ -0.81
CHCHD3-206ENST00000496427 CD163L1Q9NR16 1453 aa9.98□□□□□ -0.81
CHCHD3-206ENST00000496427 C5P01031 1676 aa9.97□□□□□ -0.81
CHCHD3-206ENST00000496427 KCNH5Q8NCM2 988 aa9.97□□□□□ -0.81
CHCHD3-206ENST00000496427 TTC21AQ8NDW8 1320 aa9.97□□□□□ -0.81
CHCHD3-206ENST00000496427 SENP3-EIF4A1A0A087X0R7 540 aa9.96□□□□□ -0.82
CHCHD3-206ENST00000496427 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.96□□□□□ -0.82
CHCHD3-206ENST00000496427 L3MBTL2Q969R5 705 aa9.96□□□□□ -0.82
CHCHD3-206ENST00000496427 ROCK2O75116 1388 aaKnown RBP9.96□□□□□ -0.82
CHCHD3-206ENST00000496427 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.95□□□□□ -0.82
CHCHD3-206ENST00000496427 NME9Q86XW9 330 aa9.95□□□□□ -0.82
CHCHD3-206ENST00000496427 ZFP91Q96JP5 570 aaPredicted RBP9.95□□□□□ -0.82
CHCHD3-206ENST00000496427 ARXQ96QS3 562 aa9.95□□□□□ -0.82
CHCHD3-206ENST00000496427 LRRC4BQ9NT99 713 aa9.95□□□□□ -0.82
CHCHD3-206ENST00000496427 NLRP2Q9NX02 1062 aa9.95□□□□□ -0.82
CHCHD3-206ENST00000496427 TAOK2Q9UL54 1235 aa9.95□□□□□ -0.82
CHCHD3-206ENST00000496427 ITGB4P16144 1822 aa9.95□□□□□ -0.82
CHCHD3-206ENST00000496427 GOLGB1Q14789 3259 aaKnown RBP9.95□□□□□ -0.82
CHCHD3-206ENST00000496427 MS4A4AQ96JQ5 239 aa9.94□□□□□ -0.82
CHCHD3-206ENST00000496427 SIN3AQ96ST3 1273 aa9.94□□□□□ -0.82
CHCHD3-206ENST00000496427 KIF20BQ96Q89 1820 aa9.93□□□□□ -0.82
CHCHD3-206ENST00000496427 TOGARAM1Q9Y4F4 1720 aa9.93□□□□□ -0.82
CHCHD3-206ENST00000496427 USP31Q70CQ4 1352 aa9.93□□□□□ -0.82
CHCHD3-206ENST00000496427 MAP3K5Q99683 1374 aa9.93□□□□□ -0.82
CHCHD3-206ENST00000496427 SBNO2Q9Y2G9 1366 aa9.93□□□□□ -0.82
CHCHD3-206ENST00000496427 IL2RBP14784 551 aa9.93□□□□□ -0.82
CHCHD3-206ENST00000496427 KCNQ4P56696 695 aa9.93□□□□□ -0.82
CHCHD3-206ENST00000496427 ANKRD24Q8TF21 1146 aa9.93□□□□□ -0.82
CHCHD3-206ENST00000496427 C1QTNF8P60827 252 aa9.92□□□□□ -0.82
CHCHD3-206ENST00000496427 PNPLA7Q6ZV29 1317 aa9.91□□□□□ -0.82
CHCHD3-206ENST00000496427 GPR162Q16538 588 aa9.91□□□□□ -0.82
CHCHD3-206ENST00000496427 NLGN2Q8NFZ4 835 aa9.91□□□□□ -0.82
CHCHD3-206ENST00000496427 RNF25Q96BH1 459 aaPredicted RBP9.91□□□□□ -0.82
CHCHD3-206ENST00000496427 UBR3Q6ZT12 1888 aa9.91□□□□□ -0.82
CHCHD3-206ENST00000496427 EDC4Q6P2E9 1401 aaKnown RBP9.9□□□□□ -0.82
CHCHD3-206ENST00000496427 A0A1W2PP64 1363 aa9.9□□□□□ -0.82
CHCHD3-206ENST00000496427 NSD2O96028 1365 aa9.9□□□□□ -0.82
CHCHD3-206ENST00000496427 NEUROD1Q13562 356 aa9.9□□□□□ -0.82
CHCHD3-206ENST00000496427 TMC1Q8TDI8 760 aa9.9□□□□□ -0.82
CHCHD3-206ENST00000496427 LTV1Q96GA3 475 aaPredicted RBP9.9□□□□□ -0.82
CHCHD3-206ENST00000496427 MEGF6O75095 1541 aa9.9□□□□□ -0.82
CHCHD3-206ENST00000496427 ZNF316A6NFI3 1004 aaPredicted RBP9.89□□□□□ -0.83
CHCHD3-206ENST00000496427 ARSIQ5FYB1 569 aa9.89□□□□□ -0.83
CHCHD3-206ENST00000496427 DDX54Q8TDD1 881 aaKnown RBP9.89□□□□□ -0.83
CHCHD3-206ENST00000496427 GIGYF1O75420 1035 aaPredicted RBP9.88□□□□□ -0.83
CHCHD3-206ENST00000496427 SYTL4Q96C24 671 aaPredicted RBP9.88□□□□□ -0.83
CHCHD3-206ENST00000496427 SLC12A5Q9H2X9 1139 aa9.88□□□□□ -0.83
CHCHD3-206ENST00000496427 C4BP0C0L5 1744 aa9.87□□□□□ -0.83
CHCHD3-206ENST00000496427 FBLN1P23142 703 aa9.87□□□□□ -0.83
CHCHD3-206ENST00000496427 POLD1P28340 1107 aa9.87□□□□□ -0.83
CHCHD3-206ENST00000496427 PKD1L3Q7Z443 1732 aa9.87□□□□□ -0.83
CHCHD3-206ENST00000496427 ANKRD36BQ8N2N9 1353 aa9.87□□□□□ -0.83
CHCHD3-206ENST00000496427 YBX3P16989 372 aaKnown RBP eCLIP9.86□□□□□ -0.836e-7■■■□□ 17.7
CHCHD3-206ENST00000496427 PRIM1P49642 420 aaKnown RBP9.86□□□□□ -0.83
CHCHD3-206ENST00000496427 SLC27A3Q5K4L6 730 aa9.86□□□□□ -0.83
CHCHD3-206ENST00000496427 MSL1Q68DK7 614 aa9.86□□□□□ -0.83
CHCHD3-206ENST00000496427 HDGFL2Q7Z4V5 671 aaPredicted RBP9.86□□□□□ -0.83
CHCHD3-206ENST00000496427 TFCP2L1Q9NZI6 479 aa9.86□□□□□ -0.83
CHCHD3-206ENST00000496427 MAP2P11137 1827 aaKnown RBP9.86□□□□□ -0.83
CHCHD3-206ENST00000496427 N4BP2Q86UW6 1770 aaPredicted RBP9.86□□□□□ -0.83
CHCHD3-206ENST00000496427 ANKRD13DQ6ZTN6 518 aa9.85□□□□□ -0.83
CHCHD3-206ENST00000496427 SLC16A10Q8TF71 515 aa9.85□□□□□ -0.83
CHCHD3-206ENST00000496427 IP6K1Q92551 441 aa9.85□□□□□ -0.83
CHCHD3-206ENST00000496427 CARD11Q9BXL7 1154 aa9.85□□□□□ -0.83
CHCHD3-206ENST00000496427 KIAA1551Q9HCM1 1747 aa9.85□□□□□ -0.83
CHCHD3-206ENST00000496427 MAP3K19Q56UN5 1328 aa9.84□□□□□ -0.83
CHCHD3-206ENST00000496427 ATP10DQ9P241 1426 aa9.84□□□□□ -0.83
CHCHD3-206ENST00000496427 USHBP1Q8N6Y0 703 aa9.84□□□□□ -0.83
CHCHD3-206ENST00000496427 CCNL1Q9UK58 526 aaPredicted RBP9.84□□□□□ -0.83
CHCHD3-206ENST00000496427 CEP350Q5VT06 3117 aa9.84□□□□□ -0.83
CHCHD3-206ENST00000496427 ANKRD26Q9UPS8 1709 aa9.83□□□□□ -0.84
CHCHD3-206ENST00000496427 HOXC9P31274 260 aa9.83□□□□□ -0.84
CHCHD3-206ENST00000496427 PBX2P40425 430 aa9.83□□□□□ -0.84
CHCHD3-206ENST00000496427 COL23A1Q86Y22 540 aaPredicted RBP9.83□□□□□ -0.84
CHCHD3-206ENST00000496427 FBXO22Q8NEZ5 403 aa9.83□□□□□ -0.84
CHCHD3-206ENST00000496427 KIF13BQ9NQT8 1826 aa9.82□□□□□ -0.84
CHCHD3-206ENST00000496427 LSM11P83369 360 aaKnown RBP eCLIP9.82□□□□□ -0.843e-10■■■■■ 44.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms