RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 EIF4A2Q14240 407 aaKnown RBP16.16■□□□□ 0.18
FDPS-215ENST00000490140 ASAP1Q9ULH1 1129 aa16.16■□□□□ 0.18
FDPS-215ENST00000490140 RTCBQ9Y3I0 505 aaKnown RBP16.16■□□□□ 0.18
FDPS-215ENST00000490140 ADCY9O60503 1353 aa16.15■□□□□ 0.18
FDPS-215ENST00000490140 TNNT2P45379 298 aaPredicted RBP16.15■□□□□ 0.18
FDPS-215ENST00000490140 EIF4G2P78344 907 aaKnown RBP eCLIP16.15■□□□□ 0.18
FDPS-215ENST00000490140 AMOTQ4VCS5 1084 aa16.15■□□□□ 0.18
FDPS-215ENST00000490140 PLEKHO1Q53GL0 409 aaPredicted RBP16.15■□□□□ 0.18
FDPS-215ENST00000490140 KDRP35968 1356 aa16.14■□□□□ 0.17
FDPS-215ENST00000490140 NLGN1Q8N2Q7 840 aa16.14■□□□□ 0.17
FDPS-215ENST00000490140 ITPK1Q13572 414 aa16.13■□□□□ 0.17
FDPS-215ENST00000490140 C1orf141Q5JVX7 400 aa16.13■□□□□ 0.17
FDPS-215ENST00000490140 TRAPPC3LQ5T215 181 aa16.13■□□□□ 0.17
FDPS-215ENST00000490140 ATG3Q9NT62 314 aa16.13■□□□□ 0.17
FDPS-215ENST00000490140 CICQ96RK0 1608 aaPredicted RBP16.12■□□□□ 0.17
FDPS-215ENST00000490140 MMP10P09238 476 aa16.12■□□□□ 0.17
FDPS-215ENST00000490140 RC3H1Q5TC82 1133 aaKnown RBP16.12■□□□□ 0.17
FDPS-215ENST00000490140 AMIGO3Q86WK7 504 aa16.12■□□□□ 0.17
FDPS-215ENST00000490140 RBM42Q9BTD8 480 aaKnown RBP16.12■□□□□ 0.17
FDPS-215ENST00000490140 CNTNAP4Q9C0A0 1308 aa16.12■□□□□ 0.17
FDPS-215ENST00000490140 KIF13BQ9NQT8 1826 aa16.12■□□□□ 0.17
FDPS-215ENST00000490140 COL5A3P25940 1745 aaPredicted RBP16.11■□□□□ 0.17
FDPS-215ENST00000490140 CABP4P57796 275 aa16.11■□□□□ 0.17
FDPS-215ENST00000490140 TGFB2P61812 414 aa16.11■□□□□ 0.17
FDPS-215ENST00000490140 ZNF530Q6P9A1 599 aaPredicted RBP16.11■□□□□ 0.17
FDPS-215ENST00000490140 RFC4P35249 363 aa16.1■□□□□ 0.17
FDPS-215ENST00000490140 CCDC87Q9NVE4 849 aa16.1■□□□□ 0.17
FDPS-215ENST00000490140 MORC1Q86VD1 984 aa16.09■□□□□ 0.17
FDPS-215ENST00000490140 C10orf71Q711Q0 1435 aa16.09■□□□□ 0.17
FDPS-215ENST00000490140 PXDNLA1KZ92 1463 aa16.09■□□□□ 0.17
FDPS-215ENST00000490140 MTHFSP49914 203 aa16.08■□□□□ 0.16
FDPS-215ENST00000490140 ZNF526Q8TF50 670 aaPredicted RBP16.08■□□□□ 0.16
FDPS-215ENST00000490140 PCGF6Q9BYE7 350 aa16.08■□□□□ 0.16
FDPS-215ENST00000490140 PANK3Q9H999 370 aa16.08■□□□□ 0.16
FDPS-215ENST00000490140 KNSTRNQ9Y448 316 aa16.08■□□□□ 0.16
FDPS-215ENST00000490140 PARP3Q9Y6F1 533 aa16.08■□□□□ 0.16
FDPS-215ENST00000490140 C4AP0C0L4 1744 aa16.08■□□□□ 0.16
FDPS-215ENST00000490140 RPS6KA4O75676 772 aa16.07■□□□□ 0.16
FDPS-215ENST00000490140 KDM6AO15550 1401 aaPredicted RBP16.07■□□□□ 0.16
FDPS-215ENST00000490140 HSPA6P17066 643 aa16.06■□□□□ 0.16
FDPS-215ENST00000490140 SMIM5Q71RC9 77 aa16.06■□□□□ 0.16
FDPS-215ENST00000490140 WWC3Q9ULE0 1092 aa16.06■□□□□ 0.16
FDPS-215ENST00000490140 HSPA5P11021 654 aaKnown RBP16.05■□□□□ 0.16
FDPS-215ENST00000490140 ARHGEF1Q92888 912 aaKnown RBP16.05■□□□□ 0.16
FDPS-215ENST00000490140 BCS1LQ9Y276 419 aa16.05■□□□□ 0.16
FDPS-215ENST00000490140 GYS1P13807 737 aa16.04■□□□□ 0.16
FDPS-215ENST00000490140 N4BP2Q86UW6 1770 aaPredicted RBP16.04■□□□□ 0.16
FDPS-215ENST00000490140 KIAA1551Q9HCM1 1747 aa16.03■□□□□ 0.16
FDPS-215ENST00000490140 PTCD1O75127 700 aaKnown RBP16.03■□□□□ 0.16
FDPS-215ENST00000490140 CRKLP46109 303 aaKnown RBP16.02■□□□□ 0.16
FDPS-215ENST00000490140 SULT6B1Q6IMI4 303 aa16.02■□□□□ 0.16
FDPS-215ENST00000490140 SLC4A9Q96Q91 983 aa16.02■□□□□ 0.16
FDPS-215ENST00000490140 SCN11AQ9UI33 1791 aa16.02■□□□□ 0.15
FDPS-215ENST00000490140 MYH14Q7Z406 1995 aaKnown RBP16.01■□□□□ 0.15
FDPS-215ENST00000490140 FCHSD2O94868 740 aa16.01■□□□□ 0.15
FDPS-215ENST00000490140 NFATC2IPQ8NCF5 419 aa16.01■□□□□ 0.15
FDPS-215ENST00000490140 BRCA1P38398 1863 aaKnown RBP16.01■□□□□ 0.15
FDPS-215ENST00000490140 ARFGEF1Q9Y6D6 1849 aa16.01■□□□□ 0.15
FDPS-215ENST00000490140 USP42Q9H9J4 1324 aaKnown RBP16■□□□□ 0.15
FDPS-215ENST00000490140 A0A0G2JLW4 131 aa16■□□□□ 0.15
FDPS-215ENST00000490140 AKAP4Q5JQC9 854 aa16■□□□□ 0.15
FDPS-215ENST00000490140 ARHGAP27Q6ZUM4 889 aa16■□□□□ 0.15
FDPS-215ENST00000490140 AEBP1Q8IUX7 1158 aa16■□□□□ 0.15
FDPS-215ENST00000490140 PIM2Q9P1W9 311 aa16■□□□□ 0.15
FDPS-215ENST00000490140 TJP1Q07157 1748 aa15.99■□□□□ 0.15
FDPS-215ENST00000490140 ZPR1O75312 459 aa15.99■□□□□ 0.15
FDPS-215ENST00000490140 DPEP1P16444 411 aa15.99■□□□□ 0.15
FDPS-215ENST00000490140 KIF3CO14782 793 aa15.98■□□□□ 0.15
FDPS-215ENST00000490140 TOMM70O94826 608 aa15.98■□□□□ 0.15
FDPS-215ENST00000490140 APLP1P51693 650 aa15.98■□□□□ 0.15
FDPS-215ENST00000490140 DALRD3Q5D0E6 543 aaKnown RBP15.98■□□□□ 0.15
FDPS-215ENST00000490140 CCER1Q8TC90 406 aaPredicted RBP15.98■□□□□ 0.15
FDPS-215ENST00000490140 MRC1P22897 1456 aa15.97■□□□□ 0.15
FDPS-215ENST00000490140 IL13P35225 146 aa15.97■□□□□ 0.15
FDPS-215ENST00000490140 IFFO2Q5TF58 517 aa15.97■□□□□ 0.15
FDPS-215ENST00000490140 C16orf71Q8IYS4 520 aaPredicted RBP15.97■□□□□ 0.15
FDPS-215ENST00000490140 SLC52A2Q9HAB3 445 aa15.97■□□□□ 0.15
FDPS-215ENST00000490140 KDM2BQ8NHM5 1336 aa15.95■□□□□ 0.14
FDPS-215ENST00000490140 FKBP8Q14318 412 aa15.94■□□□□ 0.14
FDPS-215ENST00000490140 SRP68Q9UHB9 627 aaKnown RBP15.94■□□□□ 0.14
FDPS-215ENST00000490140 COL15A1P39059 1388 aa15.93■□□□□ 0.14
FDPS-215ENST00000490140 AMER1Q5JTC6 1135 aaPredicted RBP15.93■□□□□ 0.14
FDPS-215ENST00000490140 C9orf131Q5VYM1 1079 aa15.93■□□□□ 0.14
FDPS-215ENST00000490140 VSIG10Q8N0Z9 540 aa15.93■□□□□ 0.14
FDPS-215ENST00000490140 VIRMAQ69YN4 1812 aaKnown RBP15.93■□□□□ 0.14
FDPS-215ENST00000490140 SOS1Q07889 1333 aaPredicted RBP15.93■□□□□ 0.14
FDPS-215ENST00000490140 ZC3H4Q9UPT8 1303 aaKnown RBP15.93■□□□□ 0.14
FDPS-215ENST00000490140 DIAPH1O60610 1272 aaKnown RBP15.92■□□□□ 0.14
FDPS-215ENST00000490140 DDR1Q08345 913 aa15.92■□□□□ 0.14
FDPS-215ENST00000490140 INTS5Q6P9B9 1019 aaKnown RBP15.92■□□□□ 0.14
FDPS-215ENST00000490140 TTC5Q8N0Z6 440 aa15.92■□□□□ 0.14
FDPS-215ENST00000490140 RBM46Q8TBY0 533 aaKnown RBP15.92■□□□□ 0.14
FDPS-215ENST00000490140 TNRC6CQ9HCJ0 1690 aaKnown RBP15.92■□□□□ 0.14
FDPS-215ENST00000490140 POLRMTO00411 1230 aaKnown RBP15.91■□□□□ 0.14
FDPS-215ENST00000490140 RNMTO43148 476 aaKnown RBP15.91■□□□□ 0.14
FDPS-215ENST00000490140 KCNA3P22001 575 aa15.91■□□□□ 0.14
FDPS-215ENST00000490140 DNAJC10Q8IXB1 793 aa15.91■□□□□ 0.14
FDPS-215ENST00000490140 RNF181Q9P0P0 153 aa15.91■□□□□ 0.14
FDPS-215ENST00000490140 NARFQ9UHQ1 456 aa15.91■□□□□ 0.14
FDPS-215ENST00000490140 ADAMTS7Q9UKP4 1686 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms