RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 LINC00116Q8NCU8 138 aa12.88□□□□□ -0.35
SNX17-207ENST00000489402 WWC3Q9ULE0 1092 aa12.88□□□□□ -0.35
SNX17-207ENST00000489402 ASAP1Q9ULH1 1129 aa12.88□□□□□ -0.35
SNX17-207ENST00000489402 GNPATO15228 680 aa12.87□□□□□ -0.35
SNX17-207ENST00000489402 HSPA5P11021 654 aaKnown RBP12.87□□□□□ -0.35
SNX17-207ENST00000489402 EIF4G2P78344 907 aaKnown RBP eCLIP12.87□□□□□ -0.35
SNX17-207ENST00000489402 SLC4A9Q96Q91 983 aa12.86□□□□□ -0.35
SNX17-207ENST00000489402 IGSF1Q8N6C5 1336 aa12.86□□□□□ -0.35
SNX17-207ENST00000489402 HSP90AB1P08238 724 aaKnown RBP12.85□□□□□ -0.35
SNX17-207ENST00000489402 PANK3Q9H999 370 aa12.85□□□□□ -0.35
SNX17-207ENST00000489402 ZNF831Q5JPB2 1677 aa12.84□□□□□ -0.35
SNX17-207ENST00000489402 ERVV-2B6SEH9 535 aa12.84□□□□□ -0.35
SNX17-207ENST00000489402 PLEKHO1Q53GL0 409 aaPredicted RBP12.84□□□□□ -0.35
SNX17-207ENST00000489402 ATG3Q9NT62 314 aa12.84□□□□□ -0.35
SNX17-207ENST00000489402 ATP10DQ9P241 1426 aa12.84□□□□□ -0.35
SNX17-207ENST00000489402 AEBP1Q8IUX7 1158 aa12.83□□□□□ -0.36
SNX17-207ENST00000489402 DCAF5Q96JK2 942 aa12.83□□□□□ -0.36
SNX17-207ENST00000489402 RBM42Q9BTD8 480 aaKnown RBP12.83□□□□□ -0.36
SNX17-207ENST00000489402 RTCBQ9Y3I0 505 aaKnown RBP12.83□□□□□ -0.36
SNX17-207ENST00000489402 KDRP35968 1356 aa12.82□□□□□ -0.36
SNX17-207ENST00000489402 AMOTQ4VCS5 1084 aa12.82□□□□□ -0.36
SNX17-207ENST00000489402 ZNF530Q6P9A1 599 aaPredicted RBP12.82□□□□□ -0.36
SNX17-207ENST00000489402 GPBP1L1Q9HC44 474 aaPredicted RBP12.82□□□□□ -0.36
SNX17-207ENST00000489402 COL5A3P25940 1745 aaPredicted RBP12.82□□□□□ -0.36
SNX17-207ENST00000489402 MMP10P09238 476 aa12.81□□□□□ -0.36
SNX17-207ENST00000489402 CABP4P57796 275 aa12.81□□□□□ -0.36
SNX17-207ENST00000489402 C1orf141Q5JVX7 400 aa12.81□□□□□ -0.36
SNX17-207ENST00000489402 TRAPPC3LQ5T215 181 aa12.81□□□□□ -0.36
SNX17-207ENST00000489402 MORC1Q86VD1 984 aa12.81□□□□□ -0.36
SNX17-207ENST00000489402 KIF13BQ9NQT8 1826 aa12.81□□□□□ -0.36
SNX17-207ENST00000489402 ADCY9O60503 1353 aa12.81□□□□□ -0.36
SNX17-207ENST00000489402 CICQ96RK0 1608 aaPredicted RBP12.8□□□□□ -0.36
SNX17-207ENST00000489402 NLGN1Q8N2Q7 840 aa12.8□□□□□ -0.36
SNX17-207ENST00000489402 KDM6AO15550 1401 aaPredicted RBP12.79□□□□□ -0.36
SNX17-207ENST00000489402 RC3H1Q5TC82 1133 aaKnown RBP12.79□□□□□ -0.36
SNX17-207ENST00000489402 ZNF526Q8TF50 670 aaPredicted RBP12.79□□□□□ -0.36
SNX17-207ENST00000489402 KNSTRNQ9Y448 316 aa12.79□□□□□ -0.36
SNX17-207ENST00000489402 CNTNAP4Q9C0A0 1308 aa12.79□□□□□ -0.36
SNX17-207ENST00000489402 KIAA1551Q9HCM1 1747 aa12.79□□□□□ -0.36
SNX17-207ENST00000489402 RFC4P35249 363 aa12.78□□□□□ -0.36
SNX17-207ENST00000489402 MTHFSP49914 203 aa12.78□□□□□ -0.36
SNX17-207ENST00000489402 C4AP0C0L4 1744 aa12.78□□□□□ -0.36
SNX17-207ENST00000489402 N4BP2Q86UW6 1770 aaPredicted RBP12.78□□□□□ -0.36
SNX17-207ENST00000489402 PXDNLA1KZ92 1463 aa12.78□□□□□ -0.36
SNX17-207ENST00000489402 MYH14Q7Z406 1995 aaKnown RBP12.78□□□□□ -0.36
SNX17-207ENST00000489402 RPS6KA4O75676 772 aa12.77□□□□□ -0.37
SNX17-207ENST00000489402 TGFB2P61812 414 aa12.77□□□□□ -0.37
SNX17-207ENST00000489402 ARHGEF1Q92888 912 aaKnown RBP12.77□□□□□ -0.37
SNX17-207ENST00000489402 CCDC87Q9NVE4 849 aa12.77□□□□□ -0.37
SNX17-207ENST00000489402 C10orf71Q711Q0 1435 aa12.77□□□□□ -0.37
SNX17-207ENST00000489402 PTCD1O75127 700 aaKnown RBP12.76□□□□□ -0.37
SNX17-207ENST00000489402 SULT6B1Q6IMI4 303 aa12.76□□□□□ -0.37
SNX17-207ENST00000489402 CCER1Q8TC90 406 aaPredicted RBP12.76□□□□□ -0.37
SNX17-207ENST00000489402 PARP3Q9Y6F1 533 aa12.76□□□□□ -0.37
SNX17-207ENST00000489402 SCN11AQ9UI33 1791 aa12.76□□□□□ -0.37
SNX17-207ENST00000489402 GYS1P13807 737 aa12.75□□□□□ -0.37
SNX17-207ENST00000489402 NFATC2IPQ8NCF5 419 aa12.75□□□□□ -0.37
SNX17-207ENST00000489402 BCS1LQ9Y276 419 aa12.75□□□□□ -0.37
SNX17-207ENST00000489402 TJP1Q07157 1748 aa12.74□□□□□ -0.37
SNX17-207ENST00000489402 A0A0G2JLW4 131 aa12.74□□□□□ -0.37
SNX17-207ENST00000489402 IL13P35225 146 aa12.74□□□□□ -0.37
SNX17-207ENST00000489402 CRKLP46109 303 aaKnown RBP12.74□□□□□ -0.37
SNX17-207ENST00000489402 MAPK8IP2Q13387 824 aaPredicted RBP12.74□□□□□ -0.37
SNX17-207ENST00000489402 LGR6Q9HBX8 967 aa12.73□□□□□ -0.37
SNX17-207ENST00000489402 SRP68Q9UHB9 627 aaKnown RBP12.73□□□□□ -0.37
SNX17-207ENST00000489402 BRCA1P38398 1863 aaKnown RBP12.73□□□□□ -0.37
SNX17-207ENST00000489402 FCHSD2O94868 740 aa12.72□□□□□ -0.37
SNX17-207ENST00000489402 DPEP1P16444 411 aa12.72□□□□□ -0.37
SNX17-207ENST00000489402 HSPA6P17066 643 aa12.72□□□□□ -0.37
SNX17-207ENST00000489402 AKAP4Q5JQC9 854 aa12.72□□□□□ -0.37
SNX17-207ENST00000489402 AMER1Q5JTC6 1135 aaPredicted RBP12.72□□□□□ -0.37
SNX17-207ENST00000489402 ARHGAP27Q6ZUM4 889 aa12.72□□□□□ -0.37
SNX17-207ENST00000489402 VIRMAQ69YN4 1812 aaKnown RBP12.72□□□□□ -0.37
SNX17-207ENST00000489402 ADAMTS7Q9UKP4 1686 aa12.71□□□□□ -0.37
SNX17-207ENST00000489402 KIF7Q2M1P5 1343 aa12.71□□□□□ -0.37
SNX17-207ENST00000489402 USP42Q9H9J4 1324 aaKnown RBP12.71□□□□□ -0.37
SNX17-207ENST00000489402 ARFGEF1Q9Y6D6 1849 aa12.71□□□□□ -0.38
SNX17-207ENST00000489402 HMOX1P09601 288 aa12.7□□□□□ -0.38
SNX17-207ENST00000489402 KCNA3P22001 575 aa12.7□□□□□ -0.38
SNX17-207ENST00000489402 CNGB1Q14028 1251 aaPredicted RBP12.7□□□□□ -0.38
SNX17-207ENST00000489402 SLC52A2Q9HAB3 445 aa12.7□□□□□ -0.38
SNX17-207ENST00000489402 KIF3CO14782 793 aa12.69□□□□□ -0.38
SNX17-207ENST00000489402 PER1O15534 1290 aaPredicted RBP12.69□□□□□ -0.38
SNX17-207ENST00000489402 ZPR1O75312 459 aa12.69□□□□□ -0.38
SNX17-207ENST00000489402 SLC39A6Q13433 755 aa12.69□□□□□ -0.38
SNX17-207ENST00000489402 FKBP8Q14318 412 aa12.69□□□□□ -0.38
SNX17-207ENST00000489402 INTS5Q6P9B9 1019 aaKnown RBP12.69□□□□□ -0.38
SNX17-207ENST00000489402 PIM2Q9P1W9 311 aa12.69□□□□□ -0.38
SNX17-207ENST00000489402 MRC1P22897 1456 aa12.69□□□□□ -0.38
SNX17-207ENST00000489402 RNMTO43148 476 aaKnown RBP12.68□□□□□ -0.38
SNX17-207ENST00000489402 DDR1Q08345 913 aa12.68□□□□□ -0.38
SNX17-207ENST00000489402 PPP4R3CPQ6ZMV5 832 aa12.68□□□□□ -0.38
SNX17-207ENST00000489402 DNAJC10Q8IXB1 793 aa12.68□□□□□ -0.38
SNX17-207ENST00000489402 DIAPH1O60610 1272 aaKnown RBP12.67□□□□□ -0.38
SNX17-207ENST00000489402 DALRD3Q5D0E6 543 aaKnown RBP12.67□□□□□ -0.38
SNX17-207ENST00000489402 CC2D1BQ5T0F9 858 aaKnown RBP12.67□□□□□ -0.38
SNX17-207ENST00000489402 SOS1Q07889 1333 aaPredicted RBP12.66□□□□□ -0.38
SNX17-207ENST00000489402 TOMM70O94826 608 aa12.66□□□□□ -0.38
SNX17-207ENST00000489402 MTHFSDQ2M296 383 aaKnown RBP12.66□□□□□ -0.38
SNX17-207ENST00000489402 COL15A1P39059 1388 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms