RNA–Protein interactions for RNA: ENST00000488965.1

SCP2-212, Transcript of sterol carrier protein 2, humanhuman

TSL 1 (best) BASIC

Gene SCP2, Length 3,926 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-212ENST00000488965 SIPA1L3O60292 1781 aaPredicted RBP8.47□□□□□ -1.05
SCP2-212ENST00000488965 MED1Q15648 1581 aaPredicted RBP8.47□□□□□ -1.05
SCP2-212ENST00000488965 ARHGEF10O15013 1369 aa8.47□□□□□ -1.05
SCP2-212ENST00000488965 LMTK3Q96Q04 1460 aa8.47□□□□□ -1.05
SCP2-212ENST00000488965 ZNF853P0CG23 659 aa8.47□□□□□ -1.05
SCP2-212ENST00000488965 MPRIPQ6WCQ1 1025 aa8.47□□□□□ -1.05
SCP2-212ENST00000488965 CHD1LQ86WJ1 897 aa8.47□□□□□ -1.05
SCP2-212ENST00000488965 KDM3BQ7LBC6 1761 aa8.46□□□□□ -1.05
SCP2-212ENST00000488965 MYL6BP14649 208 aa8.46□□□□□ -1.05
SCP2-212ENST00000488965 NEXNQ0ZGT2 675 aa8.46□□□□□ -1.05
SCP2-212ENST00000488965 NCAPD2Q15021 1401 aa8.46□□□□□ -1.06
SCP2-212ENST00000488965 KCNA6P17658 529 aa8.46□□□□□ -1.06
SCP2-212ENST00000488965 NPHP4O75161 1426 aaPredicted RBP8.46□□□□□ -1.06
SCP2-212ENST00000488965 EIF4A2Q14240 407 aaKnown RBP8.46□□□□□ -1.06
SCP2-212ENST00000488965 PLEKHO1Q53GL0 409 aaPredicted RBP8.46□□□□□ -1.06
SCP2-212ENST00000488965 DDX54Q8TDD1 881 aaKnown RBP8.46□□□□□ -1.06
SCP2-212ENST00000488965 ST18O60284 1047 aa8.45□□□□□ -1.06
SCP2-212ENST00000488965 SBNO1A3KN83 1393 aa8.45□□□□□ -1.06
SCP2-212ENST00000488965 GSE1Q14687 1217 aa8.45□□□□□ -1.06
SCP2-212ENST00000488965 SIL1Q9H173 461 aa8.45□□□□□ -1.06
SCP2-212ENST00000488965 IFIT2P09913 472 aaKnown RBP8.45□□□□□ -1.06
SCP2-212ENST00000488965 TSHZ3Q63HK5 1081 aa8.45□□□□□ -1.06
SCP2-212ENST00000488965 CHMP4AQ9BY43 222 aa8.45□□□□□ -1.06
SCP2-212ENST00000488965 DIAPH3Q9NSV4 1193 aa8.45□□□□□ -1.06
SCP2-212ENST00000488965 IFT57Q9NWB7 429 aa8.45□□□□□ -1.06
SCP2-212ENST00000488965 CDC45O75419 566 aa8.44□□□□□ -1.06
SCP2-212ENST00000488965 GNAI2P04899 355 aa8.44□□□□□ -1.06
SCP2-212ENST00000488965 CHRNA2Q15822 529 aa8.44□□□□□ -1.06
SCP2-212ENST00000488965 GPATCH3Q96I76 525 aa8.44□□□□□ -1.06
SCP2-212ENST00000488965 ABCC6O95255 1503 aa8.44□□□□□ -1.06
SCP2-212ENST00000488965 RTL1A6NKG5 1358 aa8.44□□□□□ -1.06
SCP2-212ENST00000488965 FAM177BA6PVY3 158 aa8.44□□□□□ -1.06
SCP2-212ENST00000488965 GNAT3A8MTJ3 354 aa8.44□□□□□ -1.06
SCP2-212ENST00000488965 COL18A1P39060 1754 aa8.44□□□□□ -1.06
SCP2-212ENST00000488965 KAT6BQ8WYB5 2073 aa8.44□□□□□ -1.06
SCP2-212ENST00000488965 GOLGA6L4A6NEF3 574 aa8.44□□□□□ -1.06
SCP2-212ENST00000488965 CFAP44Q96MT7 982 aa8.44□□□□□ -1.06
SCP2-212ENST00000488965 REC8O95072 547 aa8.43□□□□□ -1.06
SCP2-212ENST00000488965 GNAI3P08754 354 aa8.43□□□□□ -1.06
SCP2-212ENST00000488965 PRDM11Q9NQV5 511 aa8.43□□□□□ -1.06
SCP2-212ENST00000488965 RGPD5Q99666 1765 aa8.43□□□□□ -1.06
SCP2-212ENST00000488965 BTBD11A6QL63 1104 aa8.43□□□□□ -1.06
SCP2-212ENST00000488965 G3BP1Q13283 466 aaKnown RBP eCLIP8.43□□□□□ -1.06
SCP2-212ENST00000488965 ALDH1L2Q3SY69 923 aa8.43□□□□□ -1.06
SCP2-212ENST00000488965 INTS3Q68E01 1043 aaKnown RBP8.43□□□□□ -1.06
SCP2-212ENST00000488965 LRRC59Q96AG4 307 aaKnown RBP8.43□□□□□ -1.06
SCP2-212ENST00000488965 DDX49Q9Y6V7 483 aaKnown RBP8.43□□□□□ -1.06
SCP2-212ENST00000488965 STRCQ7RTU9 1775 aa8.43□□□□□ -1.06
SCP2-212ENST00000488965 DDX58O95786 925 aaKnown RBP8.43□□□□□ -1.06
SCP2-212ENST00000488965 TOM1L2Q6ZVM7 507 aa8.43□□□□□ -1.06
SCP2-212ENST00000488965 GCC1Q96CN9 775 aa8.43□□□□□ -1.06
SCP2-212ENST00000488965 CHMP5Q9NZZ3 219 aa8.43□□□□□ -1.06
SCP2-212ENST00000488965 FLT4P35916 1363 aa8.43□□□□□ -1.06
SCP2-212ENST00000488965 GOLGA6L3A6NEY3 463 aa8.42□□□□□ -1.06
SCP2-212ENST00000488965 CRB1P82279 1406 aa8.42□□□□□ -1.06
SCP2-212ENST00000488965 NCOA3Q9Y6Q9 1424 aa8.42□□□□□ -1.06
SCP2-212ENST00000488965 SRGAP3O43295 1099 aa8.42□□□□□ -1.06
SCP2-212ENST00000488965 SEC24BO95487 1268 aa8.42□□□□□ -1.06
SCP2-212ENST00000488965 HSP90B1P14625 803 aaKnown RBP8.42□□□□□ -1.06
SCP2-212ENST00000488965 HSPA2P54652 639 aa8.42□□□□□ -1.06
SCP2-212ENST00000488965 CABLES1Q8TDN4 633 aa8.42□□□□□ -1.06
SCP2-212ENST00000488965 NEUROD6Q96NK8 337 aa8.42□□□□□ -1.06
SCP2-212ENST00000488965 SRCIN1Q9C0H9 1055 aa8.42□□□□□ -1.06
SCP2-212ENST00000488965 PTCD1O75127 700 aaKnown RBP8.42□□□□□ -1.06
SCP2-212ENST00000488965 TATP17735 454 aaPredicted RBP8.42□□□□□ -1.06
SCP2-212ENST00000488965 NAP1L5Q96NT1 182 aaPredicted RBP8.42□□□□□ -1.06
SCP2-212ENST00000488965 CCDC85AQ96PX6 553 aaPredicted RBP8.42□□□□□ -1.06
SCP2-212ENST00000488965 MEIS3Q99687 375 aa8.42□□□□□ -1.06
SCP2-212ENST00000488965 DNAJC5Q9H3Z4 198 aa8.42□□□□□ -1.06
SCP2-212ENST00000488965 TUBGCP6Q96RT7 1819 aa8.42□□□□□ -1.06
SCP2-212ENST00000488965 MAP3K19Q56UN5 1328 aa8.41□□□□□ -1.06
SCP2-212ENST00000488965 NUTM1Q86Y26 1132 aa8.41□□□□□ -1.06
SCP2-212ENST00000488965 HDAC5Q9UQL6 1122 aa8.41□□□□□ -1.06
SCP2-212ENST00000488965 IGSF1Q8N6C5 1336 aa8.41□□□□□ -1.06
SCP2-212ENST00000488965 DCCP43146 1447 aa8.41□□□□□ -1.06
SCP2-212ENST00000488965 NEK4P51957 841 aa8.41□□□□□ -1.06
SCP2-212ENST00000488965 MTHFSDQ2M296 383 aaKnown RBP8.41□□□□□ -1.06
SCP2-212ENST00000488965 JARID2Q92833 1246 aaPredicted RBP8.41□□□□□ -1.06
SCP2-212ENST00000488965 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.41□□□□□ -1.06
SCP2-212ENST00000488965 L1TD1Q5T7N2 865 aaKnown RBP8.41□□□□□ -1.06
SCP2-212ENST00000488965 RBM42Q9BTD8 480 aaKnown RBP8.41□□□□□ -1.06
SCP2-212ENST00000488965 VAMP4O75379 141 aa8.4□□□□□ -1.06
SCP2-212ENST00000488965 GTF2E1P29083 439 aaPredicted RBP8.4□□□□□ -1.06
SCP2-212ENST00000488965 PIP4K2AP48426 406 aaPredicted RBP8.4□□□□□ -1.06
SCP2-212ENST00000488965 FOSBP53539 338 aa8.4□□□□□ -1.06
SCP2-212ENST00000488965 DNTTIP2Q5QJE6 756 aaKnown RBP8.4□□□□□ -1.06
SCP2-212ENST00000488965 CCT4P50991 539 aaKnown RBP8.4□□□□□ -1.06
SCP2-212ENST00000488965 TAF7Q15545 349 aaPredicted RBP8.4□□□□□ -1.06
SCP2-212ENST00000488965 CLASRPQ8N2M8 674 aaKnown RBP8.4□□□□□ -1.06
SCP2-212ENST00000488965 EYA1Q99502 592 aa8.4□□□□□ -1.06
SCP2-212ENST00000488965 ABCA3Q99758 1704 aa8.4□□□□□ -1.06
SCP2-212ENST00000488965 FLIIQ13045 1269 aa8.4□□□□□ -1.07
SCP2-212ENST00000488965 IL27Q8NEV9 243 aa8.4□□□□□ -1.07
SCP2-212ENST00000488965 TOMM22Q9NS69 142 aa8.4□□□□□ -1.07
SCP2-212ENST00000488965 LRRFIP2Q9Y608 721 aaKnown RBP8.4□□□□□ -1.07
SCP2-212ENST00000488965 KIAA0232Q92628 1395 aa8.39□□□□□ -1.07
SCP2-212ENST00000488965 A0A0U1RQG5 324 aaPredicted RBP8.39□□□□□ -1.07
SCP2-212ENST00000488965 RGS12O14924 1447 aa8.39□□□□□ -1.07
SCP2-212ENST00000488965 C8orf34Q49A92 452 aa8.39□□□□□ -1.07
SCP2-212ENST00000488965 KRT28Q7Z3Y7 464 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms