RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 AMOTQ4VCS5 1084 aa35.53■■■■□ 3.28
RNF220-216ENST00000488865 DCAF5Q96JK2 942 aa35.53■■■■□ 3.28
RNF220-216ENST00000488865 PHF14O94880 888 aa35.52■■■■□ 3.28
RNF220-216ENST00000488865 ITPK1Q13572 414 aa35.52■■■■□ 3.28
RNF220-216ENST00000488865 GRIN3BO60391 1043 aa35.49■■■■□ 3.27
RNF220-216ENST00000488865 ZNF530Q6P9A1 599 aaPredicted RBP35.48■■■■□ 3.27
RNF220-216ENST00000488865 YBX3P16989 372 aaKnown RBP eCLIP35.47■■■■□ 3.27
RNF220-216ENST00000488865 SMIM5Q71RC9 77 aa35.47■■■■□ 3.27
RNF220-216ENST00000488865 GNPATO15228 680 aa35.46■■■■□ 3.27
RNF220-216ENST00000488865 KDRP35968 1356 aa35.46■■■■□ 3.27
RNF220-216ENST00000488865 AMER1Q5JTC6 1135 aaPredicted RBP35.45■■■■□ 3.27
RNF220-216ENST00000488865 AEBP1Q8IUX7 1158 aa35.45■■■■□ 3.27
RNF220-216ENST00000488865 ZNF831Q5JPB2 1677 aa35.45■■■■□ 3.27
RNF220-216ENST00000488865 KDM6AO15550 1401 aaPredicted RBP35.44■■■■□ 3.26
RNF220-216ENST00000488865 KIF7Q2M1P5 1343 aa35.43■■■■□ 3.26
RNF220-216ENST00000488865 IL13P35225 146 aa35.42■■■■□ 3.26
RNF220-216ENST00000488865 CABP4P57796 275 aa35.42■■■■□ 3.26
RNF220-216ENST00000488865 SULT6B1Q6IMI4 303 aa35.42■■■■□ 3.26
RNF220-216ENST00000488865 C1orf141Q5JVX7 400 aa35.41■■■■□ 3.26
RNF220-216ENST00000488865 MTHFSP49914 203 aa35.4■■■■□ 3.26
RNF220-216ENST00000488865 SLC4A9Q96Q91 983 aa35.4■■■■□ 3.26
RNF220-216ENST00000488865 RBM42Q9BTD8 480 aaKnown RBP35.39■■■■□ 3.26
RNF220-216ENST00000488865 RC3H1Q5TC82 1133 aaKnown RBP35.38■■■■□ 3.25
RNF220-216ENST00000488865 RTCBQ9Y3I0 505 aaKnown RBP35.37■■■■□ 3.25
RNF220-216ENST00000488865 TRAPPC3LQ5T215 181 aa35.35■■■■□ 3.25
RNF220-216ENST00000488865 CNTNAP4Q9C0A0 1308 aa35.33■■■■□ 3.25
RNF220-216ENST00000488865 COL5A3P25940 1745 aaPredicted RBP35.33■■■■□ 3.25
RNF220-216ENST00000488865 ADRA2BP18089 450 aa35.33■■■■□ 3.25
RNF220-216ENST00000488865 PER1O15534 1290 aaPredicted RBP35.32■■■■□ 3.24
RNF220-216ENST00000488865 NFATC2IPQ8NCF5 419 aa35.31■■■■□ 3.24
RNF220-216ENST00000488865 RPS6KA4O75676 772 aa35.29■■■■□ 3.24
RNF220-216ENST00000488865 MMP10P09238 476 aa35.29■■■■□ 3.24
RNF220-216ENST00000488865 C1QTNF8P60827 252 aa35.29■■■■□ 3.24
RNF220-216ENST00000488865 NLGN1Q8N2Q7 840 aa35.28■■■■□ 3.24
RNF220-216ENST00000488865 AKAP4Q5JQC9 854 aa35.27■■■■□ 3.24
RNF220-216ENST00000488865 ARHGEF1Q92888 912 aaKnown RBP35.27■■■■□ 3.24
RNF220-216ENST00000488865 SCN11AQ9UI33 1791 aa35.27■■■■□ 3.24
RNF220-216ENST00000488865 PTCD1O75127 700 aaKnown RBP35.26■■■■□ 3.24
RNF220-216ENST00000488865 GIGYF1O75420 1035 aaPredicted RBP35.24■■■■□ 3.23
RNF220-216ENST00000488865 RFC4P35249 363 aa35.24■■■■□ 3.23
RNF220-216ENST00000488865 MYH14Q7Z406 1995 aaKnown RBP35.24■■■■□ 3.23
RNF220-216ENST00000488865 CC2D1BQ5T0F9 858 aaKnown RBP35.22■■■■□ 3.23
RNF220-216ENST00000488865 GYS1P13807 737 aa35.21■■■■□ 3.23
RNF220-216ENST00000488865 CICQ96RK0 1608 aaPredicted RBP35.21■■■■□ 3.23
RNF220-216ENST00000488865 KIF13BQ9NQT8 1826 aa35.2■■■■□ 3.23
RNF220-216ENST00000488865 DIAPH1O60610 1272 aaKnown RBP35.2■■■■□ 3.23
RNF220-216ENST00000488865 CRKLP46109 303 aaKnown RBP35.2■■■■□ 3.23
RNF220-216ENST00000488865 HMOX1P09601 288 aa35.19■■■■□ 3.22
RNF220-216ENST00000488865 SLC52A2Q9HAB3 445 aa35.19■■■■□ 3.22
RNF220-216ENST00000488865 NPC1L1Q9UHC9 1359 aa35.19■■■■□ 3.22
RNF220-216ENST00000488865 TGFB2P61812 414 aa35.17■■■■□ 3.22
RNF220-216ENST00000488865 LGR6Q9HBX8 967 aa35.17■■■■□ 3.22
RNF220-216ENST00000488865 C4AP0C0L4 1744 aa35.17■■■■□ 3.22
RNF220-216ENST00000488865 TJP1Q07157 1748 aa35.17■■■■□ 3.22
RNF220-216ENST00000488865 ATP10DQ9P241 1426 aa35.16■■■■□ 3.22
RNF220-216ENST00000488865 WWC3Q9ULE0 1092 aa35.16■■■■□ 3.22
RNF220-216ENST00000488865 RNMTO43148 476 aaKnown RBP35.15■■■■□ 3.22
RNF220-216ENST00000488865 PXDNLA1KZ92 1463 aa35.15■■■■□ 3.22
RNF220-216ENST00000488865 MRC1P22897 1456 aa35.15■■■■□ 3.22
RNF220-216ENST00000488865 C10orf71Q711Q0 1435 aa35.15■■■■□ 3.22
RNF220-216ENST00000488865 CCDC87Q9NVE4 849 aa35.14■■■■□ 3.22
RNF220-216ENST00000488865 ADCY9O60503 1353 aa35.13■■■■□ 3.21
RNF220-216ENST00000488865 SENP3-EIF4A1A0A087X0R7 540 aa35.13■■■■□ 3.21
RNF220-216ENST00000488865 MTHFSDQ2M296 383 aaKnown RBP35.13■■■■□ 3.21
RNF220-216ENST00000488865 PARP3Q9Y6F1 533 aa35.13■■■■□ 3.21
RNF220-216ENST00000488865 KIAA1551Q9HCM1 1747 aa35.12■■■■□ 3.21
RNF220-216ENST00000488865 INTS5Q6P9B9 1019 aaKnown RBP35.11■■■■□ 3.21
RNF220-216ENST00000488865 ADAMTS7Q9UKP4 1686 aa35.1■■■■□ 3.21
RNF220-216ENST00000488865 USP42Q9H9J4 1324 aaKnown RBP35.09■■■■□ 3.21
RNF220-216ENST00000488865 VIRMAQ69YN4 1812 aaKnown RBP35.09■■■■□ 3.21
RNF220-216ENST00000488865 COL3A1P02461 1466 aaPredicted RBP35.08■■■■□ 3.21
RNF220-216ENST00000488865 N4BP2Q86UW6 1770 aaPredicted RBP35.08■■■■□ 3.21
RNF220-216ENST00000488865 A0A0G2JLW4 131 aa35.07■■■■□ 3.2
RNF220-216ENST00000488865 DNAJC10Q8IXB1 793 aa35.07■■■■□ 3.2
RNF220-216ENST00000488865 GPBP1L1Q9HC44 474 aaPredicted RBP35.07■■■■□ 3.2
RNF220-216ENST00000488865 SRP68Q9UHB9 627 aaKnown RBP35.07■■■■□ 3.2
RNF220-216ENST00000488865 SLC39A6Q13433 755 aa35.05■■■■□ 3.2
RNF220-216ENST00000488865 FKBP8Q14318 412 aa35.05■■■■□ 3.2
RNF220-216ENST00000488865 KCPQ6ZWJ8 1503 aa35.03■■■■□ 3.2
RNF220-216ENST00000488865 CYP19A1P11511 503 aaPredicted RBP35.03■■■■□ 3.2
RNF220-216ENST00000488865 DPEP1P16444 411 aa35.03■■■■□ 3.2
RNF220-216ENST00000488865 BCS1LQ9Y276 419 aa35.03■■■■□ 3.2
RNF220-216ENST00000488865 VSIG10Q8N0Z9 540 aa35.02■■■■□ 3.2
RNF220-216ENST00000488865 SOS1Q07889 1333 aaPredicted RBP35.02■■■■□ 3.2
RNF220-216ENST00000488865 U2SURPO15042 1029 aaKnown RBP35■■■■□ 3.19
RNF220-216ENST00000488865 CNGB1Q14028 1251 aaPredicted RBP35■■■■□ 3.19
RNF220-216ENST00000488865 ZPR1O75312 459 aa34.99■■■■□ 3.19
RNF220-216ENST00000488865 DDR1Q08345 913 aa34.99■■■■□ 3.19
RNF220-216ENST00000488865 GAS2L2Q8NHY3 880 aa34.98■■■■□ 3.19
RNF220-216ENST00000488865 BRCA1P38398 1863 aaKnown RBP34.98■■■■□ 3.19
RNF220-216ENST00000488865 TM4SF1P30408 202 aa34.97■■■■□ 3.19
RNF220-216ENST00000488865 ZNF526Q8TF50 670 aaPredicted RBP34.97■■■■□ 3.19
RNF220-216ENST00000488865 KCNA3P22001 575 aa34.96■■■■□ 3.19
RNF220-216ENST00000488865 UBR2Q8IWV8 1755 aa34.95■■■■□ 3.19
RNF220-216ENST00000488865 FCHSD2O94868 740 aa34.95■■■■□ 3.19
RNF220-216ENST00000488865 USPL1Q5W0Q7 1092 aa34.95■■■■□ 3.19
RNF220-216ENST00000488865 GNAT3A8MTJ3 354 aa34.94■■■■□ 3.18
RNF220-216ENST00000488865 NARFQ9UHQ1 456 aa34.94■■■■□ 3.18
RNF220-216ENST00000488865 POLRMTO00411 1230 aaKnown RBP34.93■■■■□ 3.18
RNF220-216ENST00000488865 TTC5Q8N0Z6 440 aa34.93■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms