RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 GPC1P35052 558 aa7.81□□□□□ -1.16
SSR1-209ENST00000488834 SCNN1DP51172 638 aa7.81□□□□□ -1.16
SSR1-209ENST00000488834 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.81□□□□□ -1.161e-14■■□□□ 14.5
SSR1-209ENST00000488834 KANK4Q5T7N3 995 aaPredicted RBP7.81□□□□□ -1.16
SSR1-209ENST00000488834 LYSMD3Q7Z3D4 306 aa7.81□□□□□ -1.16
SSR1-209ENST00000488834 PRICKLE2Q7Z3G6 844 aa7.81□□□□□ -1.16
SSR1-209ENST00000488834 RNF217Q8TC41 542 aa7.81□□□□□ -1.16
SSR1-209ENST00000488834 RNF144AP50876 292 aaPredicted RBP7.8□□□□□ -1.16
SSR1-209ENST00000488834 CENPCQ03188 943 aa7.8□□□□□ -1.16
SSR1-209ENST00000488834 TMEM214Q6NUQ4 689 aaKnown RBP7.8□□□□□ -1.16
SSR1-209ENST00000488834 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.8□□□□□ -1.16
SSR1-209ENST00000488834 XAGE2Q96GT9 111 aa7.8□□□□□ -1.16
SSR1-209ENST00000488834 ZSCAN10Q96SZ4 725 aaPredicted RBP7.8□□□□□ -1.16
SSR1-209ENST00000488834 KIAA1024Q9UPX6 916 aa7.8□□□□□ -1.16
SSR1-209ENST00000488834 USP17L15C9J2P7 530 aa7.79□□□□□ -1.16
SSR1-209ENST00000488834 USP17L10C9JJH3 530 aa7.79□□□□□ -1.16
SSR1-209ENST00000488834 USP17L13C9JLJ4 530 aa7.79□□□□□ -1.16
SSR1-209ENST00000488834 USP17L12C9JPN9 530 aa7.79□□□□□ -1.16
SSR1-209ENST00000488834 USP17L11C9JVI0 530 aa7.79□□□□□ -1.16
SSR1-209ENST00000488834 USP17L21D6R901 530 aa7.79□□□□□ -1.16
SSR1-209ENST00000488834 USP17L18D6R9N7 530 aa7.79□□□□□ -1.16
SSR1-209ENST00000488834 USP17L22D6RA61 530 aa7.79□□□□□ -1.16
SSR1-209ENST00000488834 USP17L17D6RBQ6 530 aa7.79□□□□□ -1.16
SSR1-209ENST00000488834 USP17L19D6RCP7 530 aa7.79□□□□□ -1.16
SSR1-209ENST00000488834 USP17L20D6RJB6 530 aa7.79□□□□□ -1.16
SSR1-209ENST00000488834 USP17L24Q0WX57 530 aa7.79□□□□□ -1.16
SSR1-209ENST00000488834 CRTC2Q53ET0 693 aaPredicted RBP7.79□□□□□ -1.16
SSR1-209ENST00000488834 GNASQ5JWF2 1037 aa7.79□□□□□ -1.16
SSR1-209ENST00000488834 FOXD4L5Q5VV16 416 aaPredicted RBP7.79□□□□□ -1.16
SSR1-209ENST00000488834 PBXIP1Q96AQ6 731 aa7.79□□□□□ -1.16
SSR1-209ENST00000488834 FAM196BA6NMK8 535 aa7.78□□□□□ -1.16
SSR1-209ENST00000488834 TMEM229AB2RXF0 380 aa7.78□□□□□ -1.16
SSR1-209ENST00000488834 H3BM21 787 aa7.78□□□□□ -1.16
SSR1-209ENST00000488834 WASLO00401 505 aaPredicted RBP7.78□□□□□ -1.16
SSR1-209ENST00000488834 LORP23490 312 aaPredicted RBP7.78□□□□□ -1.16
SSR1-209ENST00000488834 SEC13P55735 322 aa7.78□□□□□ -1.16
SSR1-209ENST00000488834 ZNF358Q9NW07 568 aa7.78□□□□□ -1.16
SSR1-209ENST00000488834 NXF1Q9UBU9 619 aaKnown RBP7.78□□□□□ -1.16
SSR1-209ENST00000488834 SFI1A8K8P3 1242 aa7.77□□□□□ -1.17
SSR1-209ENST00000488834 ZBTB7BO15156 539 aaPredicted RBP7.77□□□□□ -1.17
SSR1-209ENST00000488834 RHOQP17081 205 aa7.77□□□□□ -1.17
SSR1-209ENST00000488834 SMTNP53814 917 aa7.77□□□□□ -1.17
SSR1-209ENST00000488834 DPYDQ12882 1025 aa7.77□□□□□ -1.17
SSR1-209ENST00000488834 PTK7Q13308 1070 aa7.77□□□□□ -1.17
SSR1-209ENST00000488834 ANKMY2Q8IV38 441 aa7.77□□□□□ -1.17
SSR1-209ENST00000488834 SIX5Q8N196 739 aa7.77□□□□□ -1.17
SSR1-209ENST00000488834 GMPRP36959 345 aa7.76□□□□□ -1.17
SSR1-209ENST00000488834 POU4F2Q12837 409 aa7.76□□□□□ -1.17
SSR1-209ENST00000488834 NBPF15Q8N660 670 aa7.76□□□□□ -1.17
SSR1-209ENST00000488834 FAM200AQ8TCP9 573 aa7.76□□□□□ -1.17
SSR1-209ENST00000488834 HINFPQ9BQA5 517 aa7.76□□□□□ -1.17
SSR1-209ENST00000488834 GRIP2Q9C0E4 1043 aa7.76□□□□□ -1.17
SSR1-209ENST00000488834 NOVA2Q9UNW9 492 aaKnown RBP7.76□□□□□ -1.17
SSR1-209ENST00000488834 ACIN1Q9UKV3 1341 aaKnown RBP7.76□□□□□ -1.17
SSR1-209ENST00000488834 A6NJY4 79 aa7.75□□□□□ -1.17
SSR1-209ENST00000488834 PPP1R15AO75807 674 aaPredicted RBP7.75□□□□□ -1.17
SSR1-209ENST00000488834 TAS1R3Q7RTX0 852 aa7.75□□□□□ -1.17
SSR1-209ENST00000488834 SENP3-EIF4A1A0A087X0R7 540 aa7.74□□□□□ -1.17
SSR1-209ENST00000488834 PHKA2P46019 1235 aa7.74□□□□□ -1.17
SSR1-209ENST00000488834 PTSQ03393 145 aa7.74□□□□□ -1.17
SSR1-209ENST00000488834 TNS4Q8IZW8 715 aa7.74□□□□□ -1.17
SSR1-209ENST00000488834 TSEN2Q8NCE0 465 aaKnown RBP7.74□□□□□ -1.17
SSR1-209ENST00000488834 RHBDD1Q8TEB9 315 aa7.74□□□□□ -1.17
SSR1-209ENST00000488834 SLC4A9Q96Q91 983 aa7.74□□□□□ -1.17
SSR1-209ENST00000488834 FHDC1Q9C0D6 1143 aaPredicted RBP7.74□□□□□ -1.17
SSR1-209ENST00000488834 TIMMDC1Q9NPL8 285 aa7.74□□□□□ -1.17
SSR1-209ENST00000488834 CABP1Q9NZU7 370 aa7.74□□□□□ -1.17
SSR1-209ENST00000488834 CHMP3Q9Y3E7 222 aa7.74□□□□□ -1.17
SSR1-209ENST00000488834 HRH3Q9Y5N1 445 aa7.74□□□□□ -1.17
SSR1-209ENST00000488834 PPFIA3O75145 1194 aa7.73□□□□□ -1.17
SSR1-209ENST00000488834 NBPF10Q6P3W6 841 aaKnown RBP7.73□□□□□ -1.17
SSR1-209ENST00000488834 GPR161Q8N6U8 529 aaKnown RBP7.73□□□□□ -1.17
SSR1-209ENST00000488834 NIFKQ9BYG3 293 aaKnown RBP7.73□□□□□ -1.17
SSR1-209ENST00000488834 SPATA31C2B4DYI2 1134 aa7.72□□□□□ -1.17
SSR1-209ENST00000488834 M0R2N6 131 aa7.72□□□□□ -1.17
SSR1-209ENST00000488834 CDK2AP1O14519 115 aa7.72□□□□□ -1.17
SSR1-209ENST00000488834 WIPF1O43516 503 aa7.72□□□□□ -1.17
SSR1-209ENST00000488834 ATG7O95352 703 aa7.72□□□□□ -1.17
SSR1-209ENST00000488834 PLA2G4AP47712 749 aa7.72□□□□□ -1.17
SSR1-209ENST00000488834 PPARGC1BQ86YN6 1023 aaKnown RBP7.72□□□□□ -1.17
SSR1-209ENST00000488834 SLC9A9Q8IVB4 645 aa7.72□□□□□ -1.17
SSR1-209ENST00000488834 AIDAQ96BJ3 306 aa7.72□□□□□ -1.17
SSR1-209ENST00000488834 SCHIP1Q9P0W5 487 aaPredicted RBP7.72□□□□□ -1.17
SSR1-209ENST00000488834 CSB-PGBD3P0DP91 1061 aa7.71□□□□□ -1.18
SSR1-209ENST00000488834 SRPK2P78362 688 aaKnown RBP7.71□□□□□ -1.18
SSR1-209ENST00000488834 KRT76Q01546 638 aa7.71□□□□□ -1.18
SSR1-209ENST00000488834 MTFR1Q15390 333 aa7.71□□□□□ -1.18
SSR1-209ENST00000488834 C4orf17Q53FE4 359 aa7.71□□□□□ -1.18
SSR1-209ENST00000488834 TBCELQ5QJ74 424 aa7.71□□□□□ -1.18
SSR1-209ENST00000488834 RIPOR1Q6ZS17 1223 aa7.71□□□□□ -1.18
SSR1-209ENST00000488834 GAS2L1Q99501 681 aaPredicted RBP7.71□□□□□ -1.18
SSR1-209ENST00000488834 CUEDC1Q9NWM3 386 aaPredicted RBP7.71□□□□□ -1.18
SSR1-209ENST00000488834 ZNF232Q9UNY5 417 aa7.71□□□□□ -1.18
SSR1-209ENST00000488834 LGR5O75473 907 aa7.7□□□□□ -1.18
SSR1-209ENST00000488834 ELOAQ14241 798 aaKnown RBP7.7□□□□□ -1.18
SSR1-209ENST00000488834 NBPF1Q3BBV0 1214 aa7.7□□□□□ -1.18
SSR1-209ENST00000488834 WDR44Q5JSH3 913 aa7.7□□□□□ -1.18
SSR1-209ENST00000488834 CCDC155Q8N6L0 562 aa7.7□□□□□ -1.18
SSR1-209ENST00000488834 CHMP7Q8WUX9 453 aaPredicted RBP7.7□□□□□ -1.18
SSR1-209ENST00000488834 TSPAN10Q9H1Z9 355 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms