RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 C6orf118Q5T5N4 469 aa7.25□□□□□ -1.25
ECHDC1-217ENST00000488087 MRPL14Q6P1L8 145 aaKnown RBP7.25□□□□□ -1.25
ECHDC1-217ENST00000488087 STK32AQ8WU08 396 aa7.25□□□□□ -1.25
ECHDC1-217ENST00000488087 NLRP3Q96P20 1036 aa7.25□□□□□ -1.25
ECHDC1-217ENST00000488087 ETNK1Q9HBU6 452 aa7.25□□□□□ -1.25
ECHDC1-217ENST00000488087 SERTAD1Q9UHV2 236 aa7.25□□□□□ -1.25
ECHDC1-217ENST00000488087 ZMIZ1Q9ULJ6 1067 aa7.25□□□□□ -1.25
ECHDC1-217ENST00000488087 A0A1W2PRU2 124 aa7.24□□□□□ -1.25
ECHDC1-217ENST00000488087 FAM181BA6NEQ2 426 aa7.24□□□□□ -1.25
ECHDC1-217ENST00000488087 BACH1O14867 736 aa7.24□□□□□ -1.25
ECHDC1-217ENST00000488087 INHAP05111 366 aa7.24□□□□□ -1.25
ECHDC1-217ENST00000488087 SMCPP49901 116 aaPredicted RBP7.24□□□□□ -1.25
ECHDC1-217ENST00000488087 SCNN1DP51172 638 aa7.24□□□□□ -1.25
ECHDC1-217ENST00000488087 SCARF1Q14162 830 aa7.24□□□□□ -1.25
ECHDC1-217ENST00000488087 TMEM164Q5U3C3 297 aa7.24□□□□□ -1.25
ECHDC1-217ENST00000488087 KDF1Q8NAX2 398 aaPredicted RBP7.24□□□□□ -1.25
ECHDC1-217ENST00000488087 CNKSR1Q969H4 720 aa7.24□□□□□ -1.25
ECHDC1-217ENST00000488087 HINFPQ9BQA5 517 aa7.24□□□□□ -1.25
ECHDC1-217ENST00000488087 DACH1Q9UI36 760 aa7.24□□□□□ -1.25
ECHDC1-217ENST00000488087 TMEM229AB2RXF0 380 aa7.23□□□□□ -1.25
ECHDC1-217ENST00000488087 CLN3Q13286 438 aa7.23□□□□□ -1.25
ECHDC1-217ENST00000488087 PURBQ96QR8 312 aaKnown RBP7.23□□□□□ -1.25
ECHDC1-217ENST00000488087 ZNF358Q9NW07 568 aa7.23□□□□□ -1.25
ECHDC1-217ENST00000488087 IL2RAP01589 272 aa7.22□□□□□ -1.25
ECHDC1-217ENST00000488087 PDE4CQ08493 712 aa7.22□□□□□ -1.25
ECHDC1-217ENST00000488087 TSEN2Q8NCE0 465 aaKnown RBP7.22□□□□□ -1.25
ECHDC1-217ENST00000488087 INSM2Q96T92 566 aaPredicted RBP7.22□□□□□ -1.25
ECHDC1-217ENST00000488087 ESYT1Q9BSJ8 1104 aa7.22□□□□□ -1.25
ECHDC1-217ENST00000488087 POLMQ9NP87 494 aaPredicted RBP7.22□□□□□ -1.25
ECHDC1-217ENST00000488087 WASLO00401 505 aaPredicted RBP7.21□□□□□ -1.26
ECHDC1-217ENST00000488087 SPINT1O43278 529 aa7.21□□□□□ -1.26
ECHDC1-217ENST00000488087 DKK1O94907 266 aa7.21□□□□□ -1.26
ECHDC1-217ENST00000488087 TLR1Q15399 786 aa7.21□□□□□ -1.26
ECHDC1-217ENST00000488087 XAGE2Q96GT9 111 aa7.21□□□□□ -1.26
ECHDC1-217ENST00000488087 USTQ9Y2C2 406 aa7.21□□□□□ -1.26
ECHDC1-217ENST00000488087 CARNS1A5YM72 827 aa7.2□□□□□ -1.26
ECHDC1-217ENST00000488087 LGR5O75473 907 aa7.2□□□□□ -1.26
ECHDC1-217ENST00000488087 GTF2E1P29083 439 aaPredicted RBP7.2□□□□□ -1.26
ECHDC1-217ENST00000488087 SWI5Q1ZZU3 235 aa7.2□□□□□ -1.26
ECHDC1-217ENST00000488087 SLC27A3Q5K4L6 730 aa7.2□□□□□ -1.26
ECHDC1-217ENST00000488087 TRIM46Q7Z4K8 759 aa7.2□□□□□ -1.26
ECHDC1-217ENST00000488087 TNS4Q8IZW8 715 aa7.2□□□□□ -1.26
ECHDC1-217ENST00000488087 M0R2N6 131 aa7.19□□□□□ -1.26
ECHDC1-217ENST00000488087 PDIA4P13667 645 aaKnown RBP7.19□□□□□ -1.26
ECHDC1-217ENST00000488087 CTSOP43234 321 aaPredicted RBP7.19□□□□□ -1.26
ECHDC1-217ENST00000488087 SMTNP53814 917 aa7.19□□□□□ -1.26
ECHDC1-217ENST00000488087 CENPCQ03188 943 aa7.19□□□□□ -1.26
ECHDC1-217ENST00000488087 ZFP42Q96MM3 310 aa7.19□□□□□ -1.26
ECHDC1-217ENST00000488087 SLC4A9Q96Q91 983 aa7.19□□□□□ -1.26
ECHDC1-217ENST00000488087 ATP13A2Q9NQ11 1180 aa7.19□□□□□ -1.26
ECHDC1-217ENST00000488087 A6NJY4 79 aa7.18□□□□□ -1.26
ECHDC1-217ENST00000488087 TMEM88BA6NKF7 163 aa7.18□□□□□ -1.26
ECHDC1-217ENST00000488087 TERTO14746 1132 aaKnown RBP7.18□□□□□ -1.26
ECHDC1-217ENST00000488087 TMEM214Q6NUQ4 689 aaKnown RBP7.18□□□□□ -1.26
ECHDC1-217ENST00000488087 ZSCAN10Q96SZ4 725 aaPredicted RBP7.18□□□□□ -1.26
ECHDC1-217ENST00000488087 TTLL8A6PVC2 850 aa7.17□□□□□ -1.26
ECHDC1-217ENST00000488087 PRMT3O60678 531 aa7.17□□□□□ -1.26
ECHDC1-217ENST00000488087 GPC1P35052 558 aa7.17□□□□□ -1.26
ECHDC1-217ENST00000488087 FAM69CQ0P6D2 419 aa7.17□□□□□ -1.26
ECHDC1-217ENST00000488087 FIGNL2A6NMB9 653 aa7.16□□□□□ -1.26
ECHDC1-217ENST00000488087 RNF144AP50876 292 aaPredicted RBP7.16□□□□□ -1.26
ECHDC1-217ENST00000488087 TBCELQ5QJ74 424 aa7.16□□□□□ -1.26
ECHDC1-217ENST00000488087 FOXD4L5Q5VV16 416 aaPredicted RBP7.16□□□□□ -1.26
ECHDC1-217ENST00000488087 NBPF15Q8N660 670 aa7.16□□□□□ -1.26
ECHDC1-217ENST00000488087 CHMP7Q8WUX9 453 aaPredicted RBP7.16□□□□□ -1.26
ECHDC1-217ENST00000488087 SCG3Q8WXD2 468 aaKnown RBP7.16□□□□□ -1.26
ECHDC1-217ENST00000488087 PRIMPOLQ96LW4 560 aa7.16□□□□□ -1.26
ECHDC1-217ENST00000488087 FHDC1Q9C0D6 1143 aaPredicted RBP7.16□□□□□ -1.26
ECHDC1-217ENST00000488087 TSPAN10Q9H1Z9 355 aaPredicted RBP7.16□□□□□ -1.26
ECHDC1-217ENST00000488087 SCHIP1Q9P0W5 487 aaPredicted RBP7.16□□□□□ -1.26
ECHDC1-217ENST00000488087 HRH3Q9Y5N1 445 aa7.16□□□□□ -1.26
ECHDC1-217ENST00000488087 MAN1A2O60476 641 aa7.15□□□□□ -1.26
ECHDC1-217ENST00000488087 ATP2B4P23634 1241 aa7.15□□□□□ -1.26
ECHDC1-217ENST00000488087 MTFR1Q15390 333 aa7.15□□□□□ -1.26
ECHDC1-217ENST00000488087 GNASQ5JWF2 1037 aa7.15□□□□□ -1.26
ECHDC1-217ENST00000488087 PRICKLE2Q7Z3G6 844 aa7.15□□□□□ -1.26
ECHDC1-217ENST00000488087 SLC9A9Q8IVB4 645 aa7.15□□□□□ -1.26
ECHDC1-217ENST00000488087 RNF217Q8TC41 542 aa7.15□□□□□ -1.26
ECHDC1-217ENST00000488087 CLP1Q92989 425 aaKnown RBP7.15□□□□□ -1.26
ECHDC1-217ENST00000488087 SOS2Q07890 1332 aaPredicted RBP7.15□□□□□ -1.26
ECHDC1-217ENST00000488087 CDK2AP1O14519 115 aa7.14□□□□□ -1.27
ECHDC1-217ENST00000488087 PPP1R12BO60237 982 aaPredicted RBP7.14□□□□□ -1.27
ECHDC1-217ENST00000488087 EPHA4P54764 986 aa7.14□□□□□ -1.27
ECHDC1-217ENST00000488087 B4GALNT3Q6L9W6 998 aa7.14□□□□□ -1.27
ECHDC1-217ENST00000488087 ATAD2Q6PL18 1390 aa7.14□□□□□ -1.27
ECHDC1-217ENST00000488087 LYSMD3Q7Z3D4 306 aa7.14□□□□□ -1.27
ECHDC1-217ENST00000488087 GRIP2Q9C0E4 1043 aa7.14□□□□□ -1.27
ECHDC1-217ENST00000488087 SENP2Q9HC62 589 aa7.14□□□□□ -1.27
ECHDC1-217ENST00000488087 CABP1Q9NZU7 370 aa7.14□□□□□ -1.27
ECHDC1-217ENST00000488087 CHMP3Q9Y3E7 222 aa7.14□□□□□ -1.27
ECHDC1-217ENST00000488087 PPARGC1BQ86YN6 1023 aaKnown RBP7.13□□□□□ -1.27
ECHDC1-217ENST00000488087 GAS2L2Q8NHY3 880 aa7.13□□□□□ -1.27
ECHDC1-217ENST00000488087 RHBDD1Q8TEB9 315 aa7.13□□□□□ -1.27
ECHDC1-217ENST00000488087 VTI1AQ96AJ9 217 aa7.13□□□□□ -1.27
ECHDC1-217ENST00000488087 TRAIPQ9BWF2 469 aa7.13□□□□□ -1.27
ECHDC1-217ENST00000488087 NIFKQ9BYG3 293 aaKnown RBP7.13□□□□□ -1.27
ECHDC1-217ENST00000488087 USP3Q9Y6I4 520 aa7.13□□□□□ -1.27
ECHDC1-217ENST00000488087 RHOQP17081 205 aa7.12□□□□□ -1.27
ECHDC1-217ENST00000488087 IGFBP4P22692 258 aa7.12□□□□□ -1.27
ECHDC1-217ENST00000488087 PHKA2P46019 1235 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms