RNA–Protein interactions for RNA: ENST00000486934.1

TRA2A-207, Transcript of transformer 2 alpha homolog, humanhuman

TSL 2

Gene TRA2A, Length 417 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-207ENST00000486934 MAFBQ9Y5Q3 323 aaPredicted RBP10.68□□□□□ -0.7
TRA2A-207ENST00000486934 SCNN1DP51172 638 aa10.67□□□□□ -0.7
TRA2A-207ENST00000486934 CFAP70Q5T0N1 1121 aa10.67□□□□□ -0.7
TRA2A-207ENST00000486934 HRH3Q9Y5N1 445 aa10.67□□□□□ -0.7
TRA2A-207ENST00000486934 ADAMTS2O95450 1211 aa10.66□□□□□ -0.7
TRA2A-207ENST00000486934 USP4Q13107 963 aa10.66□□□□□ -0.7
TRA2A-207ENST00000486934 LYPD4Q6UWN0 246 aa10.66□□□□□ -0.7
TRA2A-207ENST00000486934 PLEKHM2Q8IWE5 1019 aa10.66□□□□□ -0.7
TRA2A-207ENST00000486934 RNF217Q8TC41 542 aa10.66□□□□□ -0.7
TRA2A-207ENST00000486934 ETNK1Q9HBU6 452 aa10.66□□□□□ -0.7
TRA2A-207ENST00000486934 POLMQ9NP87 494 aaPredicted RBP10.66□□□□□ -0.7
TRA2A-207ENST00000486934 KIAA1024Q9UPX6 916 aa10.66□□□□□ -0.7
TRA2A-207ENST00000486934 CYP2U1Q7Z449 544 aa10.65□□□□□ -0.7
TRA2A-207ENST00000486934 MYCP01106 439 aaPredicted RBP10.64□□□□□ -0.71
TRA2A-207ENST00000486934 CLDN10P78369 228 aa10.64□□□□□ -0.71
TRA2A-207ENST00000486934 SENP3-EIF4A1A0A087X0R7 540 aa10.63□□□□□ -0.71
TRA2A-207ENST00000486934 TMEM229AB2RXF0 380 aa10.63□□□□□ -0.71
TRA2A-207ENST00000486934 MEN1O00255 615 aa10.63□□□□□ -0.71
TRA2A-207ENST00000486934 ZBTB7BO15156 539 aaPredicted RBP10.63□□□□□ -0.71
TRA2A-207ENST00000486934 MAP3K10Q02779 954 aa10.63□□□□□ -0.71
TRA2A-207ENST00000486934 CLN3Q13286 438 aa10.63□□□□□ -0.71
TRA2A-207ENST00000486934 DKK1O94907 266 aa10.62□□□□□ -0.71
TRA2A-207ENST00000486934 EML3Q32P44 896 aa10.62□□□□□ -0.71
TRA2A-207ENST00000486934 KANK4Q5T7N3 995 aaPredicted RBP10.62□□□□□ -0.71
TRA2A-207ENST00000486934 GNRH1P01148 92 aa10.61□□□□□ -0.71
TRA2A-207ENST00000486934 GTF2IP78347 998 aa10.61□□□□□ -0.71
TRA2A-207ENST00000486934 SRSF11Q05519 484 aaKnown RBP10.61□□□□□ -0.71
TRA2A-207ENST00000486934 XAGE2Q96GT9 111 aa10.61□□□□□ -0.71
TRA2A-207ENST00000486934 FHDC1Q9C0D6 1143 aaPredicted RBP10.61□□□□□ -0.71
TRA2A-207ENST00000486934 CELA2BP08218 269 aaPredicted RBP10.6□□□□□ -0.71
TRA2A-207ENST00000486934 RNF144AP50876 292 aaPredicted RBP10.6□□□□□ -0.71
TRA2A-207ENST00000486934 MKRN1Q9UHC7 482 aaKnown RBP10.6□□□□□ -0.71
TRA2A-207ENST00000486934 LMOD1P29536 600 aaPredicted RBP10.59□□□□□ -0.71
TRA2A-207ENST00000486934 CNKSR1Q969H4 720 aa10.59□□□□□ -0.71
TRA2A-207ENST00000486934 ESYT1Q9BSJ8 1104 aa10.59□□□□□ -0.71
TRA2A-207ENST00000486934 GRIP2Q9C0E4 1043 aa10.59□□□□□ -0.71
TRA2A-207ENST00000486934 NOD1Q9Y239 953 aa10.59□□□□□ -0.71
TRA2A-207ENST00000486934 LZTS3O60299 673 aaPredicted RBP10.58□□□□□ -0.72
TRA2A-207ENST00000486934 GDF10P55107 478 aa10.58□□□□□ -0.72
TRA2A-207ENST00000486934 SRPK2P78362 688 aaKnown RBP10.58□□□□□ -0.72
TRA2A-207ENST00000486934 USP3Q9Y6I4 520 aa10.58□□□□□ -0.72
TRA2A-207ENST00000486934 INHAP05111 366 aa10.57□□□□□ -0.72
TRA2A-207ENST00000486934 CENPCQ03188 943 aa10.57□□□□□ -0.72
TRA2A-207ENST00000486934 GAS6Q14393 721 aa10.57□□□□□ -0.72
TRA2A-207ENST00000486934 CRTC2Q53ET0 693 aaPredicted RBP10.57□□□□□ -0.72
TRA2A-207ENST00000486934 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.57□□□□□ -0.72
TRA2A-207ENST00000486934 ENAMQ9NRM1 1142 aa10.57□□□□□ -0.72
TRA2A-207ENST00000486934 CUEDC1Q9NWM3 386 aaPredicted RBP10.57□□□□□ -0.72
TRA2A-207ENST00000486934 RHOQP17081 205 aa10.56□□□□□ -0.72
TRA2A-207ENST00000486934 CDCA8Q53HL2 280 aa10.56□□□□□ -0.72
TRA2A-207ENST00000486934 PRICKLE2Q7Z3G6 844 aa10.56□□□□□ -0.72
TRA2A-207ENST00000486934 OGFOD1Q8N543 542 aa10.56□□□□□ -0.72
TRA2A-207ENST00000486934 SIRT1Q96EB6 747 aa10.56□□□□□ -0.72
TRA2A-207ENST00000486934 ESF1Q9H501 851 aaKnown RBP10.56□□□□□ -0.72
TRA2A-207ENST00000486934 SUPT5HO00267 1087 aaKnown RBP10.55□□□□□ -0.72
TRA2A-207ENST00000486934 MSTNO14793 375 aa10.55□□□□□ -0.72
TRA2A-207ENST00000486934 RFX1P22670 979 aa10.55□□□□□ -0.72
TRA2A-207ENST00000486934 PLA2G4EQ3MJ16 856 aa10.55□□□□□ -0.72
TRA2A-207ENST00000486934 XP32Q5T750 250 aa10.55□□□□□ -0.72
TRA2A-207ENST00000486934 CCDC82Q8N4S0 544 aa10.55□□□□□ -0.72
TRA2A-207ENST00000486934 ZNF358Q9NW07 568 aa10.55□□□□□ -0.72
TRA2A-207ENST00000486934 SERTAD1Q9UHV2 236 aa10.55□□□□□ -0.72
TRA2A-207ENST00000486934 WASLO00401 505 aaPredicted RBP10.54□□□□□ -0.72
TRA2A-207ENST00000486934 GPC1P35052 558 aa10.54□□□□□ -0.72
TRA2A-207ENST00000486934 ZNF295-AS1Q8N0V1 137 aa10.54□□□□□ -0.72
TRA2A-207ENST00000486934 CNTNAP5Q8WYK1 1306 aa10.54□□□□□ -0.72
TRA2A-207ENST00000486934 ADAM23O75077 832 aa10.53□□□□□ -0.72
TRA2A-207ENST00000486934 POU4F2Q12837 409 aa10.53□□□□□ -0.72
TRA2A-207ENST00000486934 LYSMD3Q7Z3D4 306 aa10.53□□□□□ -0.72
TRA2A-207ENST00000486934 TPCN2Q8NHX9 752 aa10.53□□□□□ -0.72
TRA2A-207ENST00000486934 ZNF594Q96JF6 807 aaPredicted RBP10.53□□□□□ -0.72
TRA2A-207ENST00000486934 NLRP3Q96P20 1036 aa10.53□□□□□ -0.72
TRA2A-207ENST00000486934 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.52□□□□□ -0.73
TRA2A-207ENST00000486934 PHF20L1A8MW92 1017 aa10.52□□□□□ -0.73
TRA2A-207ENST00000486934 EPHA4P54764 986 aa10.52□□□□□ -0.73
TRA2A-207ENST00000486934 PTK7Q13308 1070 aa10.52□□□□□ -0.73
TRA2A-207ENST00000486934 CCDC102BQ68D86 513 aa10.52□□□□□ -0.73
TRA2A-207ENST00000486934 TRIM52Q96A61 297 aa10.52□□□□□ -0.73
TRA2A-207ENST00000486934 DCAF5Q96JK2 942 aa10.52□□□□□ -0.73
TRA2A-207ENST00000486934 SLC4A9Q96Q91 983 aa10.52□□□□□ -0.73
TRA2A-207ENST00000486934 DNAAF2Q9NVR5 837 aaKnown RBP10.52□□□□□ -0.73
TRA2A-207ENST00000486934 SIX5Q8N196 739 aa10.51□□□□□ -0.73
TRA2A-207ENST00000486934 ARXQ96QS3 562 aa10.51□□□□□ -0.73
TRA2A-207ENST00000486934 SPOCK3Q9BQ16 436 aa10.51□□□□□ -0.73
TRA2A-207ENST00000486934 IQSEC3Q9UPP2 1182 aaPredicted RBP10.51□□□□□ -0.73
TRA2A-207ENST00000486934 SFI1A8K8P3 1242 aa10.5□□□□□ -0.73
TRA2A-207ENST00000486934 RASA1P20936 1047 aa10.5□□□□□ -0.73
TRA2A-207ENST00000486934 MBIPQ9NS73 344 aa10.5□□□□□ -0.73
TRA2A-207ENST00000486934 SPATA31C2B4DYI2 1134 aa10.49□□□□□ -0.73
TRA2A-207ENST00000486934 USP17L15C9J2P7 530 aa10.49□□□□□ -0.73
TRA2A-207ENST00000486934 USP17L10C9JJH3 530 aa10.49□□□□□ -0.73
TRA2A-207ENST00000486934 USP17L13C9JLJ4 530 aa10.49□□□□□ -0.73
TRA2A-207ENST00000486934 USP17L12C9JPN9 530 aa10.49□□□□□ -0.73
TRA2A-207ENST00000486934 USP17L11C9JVI0 530 aa10.49□□□□□ -0.73
TRA2A-207ENST00000486934 USP17L21D6R901 530 aa10.49□□□□□ -0.73
TRA2A-207ENST00000486934 USP17L18D6R9N7 530 aa10.49□□□□□ -0.73
TRA2A-207ENST00000486934 USP17L22D6RA61 530 aa10.49□□□□□ -0.73
TRA2A-207ENST00000486934 USP17L17D6RBQ6 530 aa10.49□□□□□ -0.73
TRA2A-207ENST00000486934 USP17L19D6RCP7 530 aa10.49□□□□□ -0.73
TRA2A-207ENST00000486934 USP17L20D6RJB6 530 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms