RNA–Protein interactions for RNA: ENST00000486790.2

RCC1-212, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-212ENST00000486790 DCAF5Q96JK2 942 aa36.24■■■■□ 3.39
RCC1-212ENST00000486790 GNPATO15228 680 aa36.21■■■■□ 3.39
RCC1-212ENST00000486790 LINC00116Q8NCU8 138 aa36.21■■■■□ 3.39
RCC1-212ENST00000486790 ATG3Q9NT62 314 aa36.2■■■■□ 3.39
RCC1-212ENST00000486790 C1orf141Q5JVX7 400 aa36.18■■■■□ 3.38
RCC1-212ENST00000486790 ZNF530Q6P9A1 599 aaPredicted RBP36.17■■■■□ 3.38
RCC1-212ENST00000486790 YBX3P16989 372 aaKnown RBP eCLIP36.16■■■■□ 3.38
RCC1-212ENST00000486790 CABP4P57796 275 aa36.15■■■■□ 3.38
RCC1-212ENST00000486790 GIGYF1O75420 1035 aaPredicted RBP36.14■■■■□ 3.38
RCC1-212ENST00000486790 C1QTNF8P60827 252 aa36.14■■■■□ 3.38
RCC1-212ENST00000486790 ITPK1Q13572 414 aa36.14■■■■□ 3.38
RCC1-212ENST00000486790 RTCBQ9Y3I0 505 aaKnown RBP36.14■■■■□ 3.38
RCC1-212ENST00000486790 MTHFSP49914 203 aa36.13■■■■□ 3.37
RCC1-212ENST00000486790 RBM42Q9BTD8 480 aaKnown RBP36.13■■■■□ 3.37
RCC1-212ENST00000486790 TRAPPC3LQ5T215 181 aa36.12■■■■□ 3.37
RCC1-212ENST00000486790 ZNF831Q5JPB2 1677 aa36.11■■■■□ 3.37
RCC1-212ENST00000486790 AMIGO3Q86WK7 504 aa36.11■■■■□ 3.37
RCC1-212ENST00000486790 ADRA2BP18089 450 aa36.1■■■■□ 3.37
RCC1-212ENST00000486790 RC3H1Q5TC82 1133 aaKnown RBP36.09■■■■□ 3.37
RCC1-212ENST00000486790 SULT6B1Q6IMI4 303 aa36.07■■■■□ 3.36
RCC1-212ENST00000486790 KDRP35968 1356 aa36.06■■■■□ 3.36
RCC1-212ENST00000486790 NLGN1Q8N2Q7 840 aa36.06■■■■□ 3.36
RCC1-212ENST00000486790 SMIM5Q71RC9 77 aa36.05■■■■□ 3.36
RCC1-212ENST00000486790 SENP3-EIF4A1A0A087X0R7 540 aa36.04■■■■□ 3.36
RCC1-212ENST00000486790 CNTNAP4Q9C0A0 1308 aa36.04■■■■□ 3.36
RCC1-212ENST00000486790 MMP10P09238 476 aa36.02■■■■□ 3.36
RCC1-212ENST00000486790 RFC4P35249 363 aa36.02■■■■□ 3.36
RCC1-212ENST00000486790 AEBP1Q8IUX7 1158 aa36.02■■■■□ 3.36
RCC1-212ENST00000486790 KDM6AO15550 1401 aaPredicted RBP36.01■■■■□ 3.36
RCC1-212ENST00000486790 IL13P35225 146 aa36■■■■□ 3.35
RCC1-212ENST00000486790 RPS6KA4O75676 772 aa35.98■■■■□ 3.35
RCC1-212ENST00000486790 AMER1Q5JTC6 1135 aaPredicted RBP35.98■■■■□ 3.35
RCC1-212ENST00000486790 NFATC2IPQ8NCF5 419 aa35.98■■■■□ 3.35
RCC1-212ENST00000486790 COL5A3P25940 1745 aaPredicted RBP35.97■■■■□ 3.35
RCC1-212ENST00000486790 AKAP4Q5JQC9 854 aa35.97■■■■□ 3.35
RCC1-212ENST00000486790 TGFB2P61812 414 aa35.96■■■■□ 3.35
RCC1-212ENST00000486790 ARHGEF1Q92888 912 aaKnown RBP35.96■■■■□ 3.35
RCC1-212ENST00000486790 SLC4A9Q96Q91 983 aa35.96■■■■□ 3.35
RCC1-212ENST00000486790 KIF7Q2M1P5 1343 aa35.95■■■■□ 3.35
RCC1-212ENST00000486790 PTCD1O75127 700 aaKnown RBP35.95■■■■□ 3.35
RCC1-212ENST00000486790 CCDC87Q9NVE4 849 aa35.95■■■■□ 3.35
RCC1-212ENST00000486790 GPBP1L1Q9HC44 474 aaPredicted RBP35.93■■■■□ 3.34
RCC1-212ENST00000486790 PARP3Q9Y6F1 533 aa35.93■■■■□ 3.34
RCC1-212ENST00000486790 ATP10DQ9P241 1426 aa35.92■■■■□ 3.34
RCC1-212ENST00000486790 SCN11AQ9UI33 1791 aa35.91■■■■□ 3.34
RCC1-212ENST00000486790 KIF13BQ9NQT8 1826 aa35.89■■■■□ 3.34
RCC1-212ENST00000486790 CICQ96RK0 1608 aaPredicted RBP35.88■■■■□ 3.33
RCC1-212ENST00000486790 GYS1P13807 737 aa35.88■■■■□ 3.33
RCC1-212ENST00000486790 CRKLP46109 303 aaKnown RBP35.88■■■■□ 3.33
RCC1-212ENST00000486790 WWC3Q9ULE0 1092 aa35.88■■■■□ 3.33
RCC1-212ENST00000486790 MYH14Q7Z406 1995 aaKnown RBP35.86■■■■□ 3.33
RCC1-212ENST00000486790 DIAPH1O60610 1272 aaKnown RBP35.86■■■■□ 3.33
RCC1-212ENST00000486790 SLC52A2Q9HAB3 445 aa35.86■■■■□ 3.33
RCC1-212ENST00000486790 C4AP0C0L4 1744 aa35.83■■■■□ 3.33
RCC1-212ENST00000486790 CC2D1BQ5T0F9 858 aaKnown RBP35.83■■■■□ 3.33
RCC1-212ENST00000486790 ADCY9O60503 1353 aa35.83■■■■□ 3.33
RCC1-212ENST00000486790 C10orf71Q711Q0 1435 aa35.83■■■■□ 3.33
RCC1-212ENST00000486790 PXDNLA1KZ92 1463 aa35.82■■■■□ 3.32
RCC1-212ENST00000486790 HMOX1P09601 288 aa35.82■■■■□ 3.32
RCC1-212ENST00000486790 BCS1LQ9Y276 419 aa35.81■■■■□ 3.32
RCC1-212ENST00000486790 PER1O15534 1290 aaPredicted RBP35.8■■■■□ 3.32
RCC1-212ENST00000486790 ZPR1O75312 459 aa35.79■■■■□ 3.32
RCC1-212ENST00000486790 A0A0G2JLW4 131 aa35.78■■■■□ 3.32
RCC1-212ENST00000486790 RNMTO43148 476 aaKnown RBP35.78■■■■□ 3.32
RCC1-212ENST00000486790 ZNF526Q8TF50 670 aaPredicted RBP35.78■■■■□ 3.32
RCC1-212ENST00000486790 N4BP2Q86UW6 1770 aaPredicted RBP35.78■■■■□ 3.32
RCC1-212ENST00000486790 USP42Q9H9J4 1324 aaKnown RBP35.78■■■■□ 3.32
RCC1-212ENST00000486790 NPC1L1Q9UHC9 1359 aa35.76■■■■□ 3.32
RCC1-212ENST00000486790 TJP1Q07157 1748 aa35.76■■■■□ 3.31
RCC1-212ENST00000486790 VIRMAQ69YN4 1812 aaKnown RBP35.76■■■■□ 3.31
RCC1-212ENST00000486790 LGR6Q9HBX8 967 aa35.75■■■■□ 3.31
RCC1-212ENST00000486790 FCHSD2O94868 740 aa35.74■■■■□ 3.31
RCC1-212ENST00000486790 MRC1P22897 1456 aa35.73■■■■□ 3.31
RCC1-212ENST00000486790 DPEP1P16444 411 aa35.73■■■■□ 3.31
RCC1-212ENST00000486790 MTHFSDQ2M296 383 aaKnown RBP35.72■■■■□ 3.31
RCC1-212ENST00000486790 INTS5Q6P9B9 1019 aaKnown RBP35.72■■■■□ 3.31
RCC1-212ENST00000486790 ARHGAP27Q6ZUM4 889 aa35.72■■■■□ 3.31
RCC1-212ENST00000486790 DNAJC10Q8IXB1 793 aa35.72■■■■□ 3.31
RCC1-212ENST00000486790 VSIG10Q8N0Z9 540 aa35.72■■■■□ 3.31
RCC1-212ENST00000486790 TTC5Q8N0Z6 440 aa35.71■■■■□ 3.31
RCC1-212ENST00000486790 PIM2Q9P1W9 311 aa35.71■■■■□ 3.31
RCC1-212ENST00000486790 SRP68Q9UHB9 627 aaKnown RBP35.71■■■■□ 3.31
RCC1-212ENST00000486790 FKBP8Q14318 412 aa35.7■■■■□ 3.31
RCC1-212ENST00000486790 KIAA1551Q9HCM1 1747 aa35.7■■■■□ 3.31
RCC1-212ENST00000486790 GAS2L2Q8NHY3 880 aa35.69■■■■□ 3.3
RCC1-212ENST00000486790 U2SURPO15042 1029 aaKnown RBP35.68■■■■□ 3.3
RCC1-212ENST00000486790 SLC39A6Q13433 755 aa35.68■■■■□ 3.3
RCC1-212ENST00000486790 CYP19A1P11511 503 aaPredicted RBP35.67■■■■□ 3.3
RCC1-212ENST00000486790 SOS1Q07889 1333 aaPredicted RBP35.66■■■■□ 3.3
RCC1-212ENST00000486790 BRCA1P38398 1863 aaKnown RBP35.65■■■■□ 3.3
RCC1-212ENST00000486790 STARD3NLO95772 234 aa35.65■■■■□ 3.3
RCC1-212ENST00000486790 DALRD3Q5D0E6 543 aaKnown RBP35.65■■■■□ 3.3
RCC1-212ENST00000486790 CFAP53Q96M91 514 aa35.65■■■■□ 3.3
RCC1-212ENST00000486790 TEFQ10587 303 aa35.64■■■■□ 3.3
RCC1-212ENST00000486790 USPL1Q5W0Q7 1092 aa35.64■■■■□ 3.3
RCC1-212ENST00000486790 ADAMTS7Q9UKP4 1686 aa35.63■■■■□ 3.29
RCC1-212ENST00000486790 ARFGEF1Q9Y6D6 1849 aa35.63■■■■□ 3.29
RCC1-212ENST00000486790 CNGB1Q14028 1251 aaPredicted RBP35.63■■■■□ 3.29
RCC1-212ENST00000486790 NARFQ9UHQ1 456 aa35.63■■■■□ 3.29
RCC1-212ENST00000486790 GNAT3A8MTJ3 354 aa35.62■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms