RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 CABP4P57796 275 aa12.81□□□□□ -0.36
NUP50-215ENST00000484186 ITPK1Q13572 414 aa12.81□□□□□ -0.36
NUP50-215ENST00000484186 C1orf141Q5JVX7 400 aa12.81□□□□□ -0.36
NUP50-215ENST00000484186 CC2D1BQ5T0F9 858 aaKnown RBP12.81□□□□□ -0.36
NUP50-215ENST00000484186 AMIGO3Q86WK7 504 aa12.81□□□□□ -0.36
NUP50-215ENST00000484186 C4BP0C0L5 1744 aa12.81□□□□□ -0.36
NUP50-215ENST00000484186 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.8□□□□□ -0.36
NUP50-215ENST00000484186 SMIM5Q71RC9 77 aa12.8□□□□□ -0.36
NUP50-215ENST00000484186 NLGN2Q8NFZ4 835 aa12.8□□□□□ -0.36
NUP50-215ENST00000484186 RBM42Q9BTD8 480 aaKnown RBP12.8□□□□□ -0.36
NUP50-215ENST00000484186 KDRP35968 1356 aa12.8□□□□□ -0.36
NUP50-215ENST00000484186 GNPATO15228 680 aa12.79□□□□□ -0.36
NUP50-215ENST00000484186 SLC4A9Q96Q91 983 aa12.79□□□□□ -0.36
NUP50-215ENST00000484186 KDM6AO15550 1401 aaPredicted RBP12.79□□□□□ -0.36
NUP50-215ENST00000484186 PELP1Q8IZL8 1130 aaKnown RBP12.78□□□□□ -0.36
NUP50-215ENST00000484186 DIAPH1O60610 1272 aaKnown RBP12.77□□□□□ -0.37
NUP50-215ENST00000484186 HMOX1P09601 288 aa12.77□□□□□ -0.37
NUP50-215ENST00000484186 AKAP4Q5JQC9 854 aa12.77□□□□□ -0.37
NUP50-215ENST00000484186 RC3H1Q5TC82 1133 aaKnown RBP12.77□□□□□ -0.37
NUP50-215ENST00000484186 NFATC2IPQ8NCF5 419 aa12.77□□□□□ -0.37
NUP50-215ENST00000484186 CD2APQ9Y5K6 639 aa12.77□□□□□ -0.37
NUP50-215ENST00000484186 NPC1L1Q9UHC9 1359 aa12.77□□□□□ -0.37
NUP50-215ENST00000484186 UBR3Q6ZT12 1888 aa12.76□□□□□ -0.37
NUP50-215ENST00000484186 CNGB1Q14028 1251 aaPredicted RBP12.76□□□□□ -0.37
NUP50-215ENST00000484186 TRAPPC3LQ5T215 181 aa12.76□□□□□ -0.37
NUP50-215ENST00000484186 RTCBQ9Y3I0 505 aaKnown RBP12.76□□□□□ -0.37
NUP50-215ENST00000484186 PTCD1O75127 700 aaKnown RBP12.75□□□□□ -0.37
NUP50-215ENST00000484186 ZNF784Q8NCA9 323 aaPredicted RBP12.75□□□□□ -0.37
NUP50-215ENST00000484186 CNTNAP4Q9C0A0 1308 aa12.74□□□□□ -0.37
NUP50-215ENST00000484186 GRIN3BO60391 1043 aa12.74□□□□□ -0.37
NUP50-215ENST00000484186 RPS6KA4O75676 772 aa12.74□□□□□ -0.37
NUP50-215ENST00000484186 ARHGEF1Q92888 912 aaKnown RBP12.74□□□□□ -0.37
NUP50-215ENST00000484186 LGR6Q9HBX8 967 aa12.74□□□□□ -0.37
NUP50-215ENST00000484186 CHD4Q14839 1912 aa12.73□□□□□ -0.37
NUP50-215ENST00000484186 RNMTO43148 476 aaKnown RBP12.73□□□□□ -0.37
NUP50-215ENST00000484186 YBX3P16989 372 aaKnown RBP eCLIP12.73□□□□□ -0.37
NUP50-215ENST00000484186 ADRA2BP18089 450 aa12.73□□□□□ -0.37
NUP50-215ENST00000484186 MTHFSDQ2M296 383 aaKnown RBP12.73□□□□□ -0.37
NUP50-215ENST00000484186 SLC52A2Q9HAB3 445 aa12.73□□□□□ -0.37
NUP50-215ENST00000484186 ZNF831Q5JPB2 1677 aa12.73□□□□□ -0.37
NUP50-215ENST00000484186 UTRNP46939 3433 aa12.72□□□□□ -0.37
NUP50-215ENST00000484186 NLGN1Q8N2Q7 840 aa12.72□□□□□ -0.37
NUP50-215ENST00000484186 U2SURPO15042 1029 aaKnown RBP12.71□□□□□ -0.37
NUP50-215ENST00000484186 MMP10P09238 476 aa12.71□□□□□ -0.37
NUP50-215ENST00000484186 RFC4P35249 363 aa12.71□□□□□ -0.37
NUP50-215ENST00000484186 CRKLP46109 303 aaKnown RBP12.71□□□□□ -0.37
NUP50-215ENST00000484186 SCN11AQ9UI33 1791 aa12.69□□□□□ -0.38
NUP50-215ENST00000484186 GYS1P13807 737 aa12.69□□□□□ -0.38
NUP50-215ENST00000484186 SLC39A6Q13433 755 aa12.69□□□□□ -0.38
NUP50-215ENST00000484186 COL3A1P02461 1466 aaPredicted RBP12.69□□□□□ -0.38
NUP50-215ENST00000484186 COL5A3P25940 1745 aaPredicted RBP12.68□□□□□ -0.38
NUP50-215ENST00000484186 INTS5Q6P9B9 1019 aaKnown RBP12.68□□□□□ -0.38
NUP50-215ENST00000484186 CFAP53Q96M91 514 aa12.68□□□□□ -0.38
NUP50-215ENST00000484186 MYH14Q7Z406 1995 aaKnown RBP12.67□□□□□ -0.38
NUP50-215ENST00000484186 DNAJC10Q8IXB1 793 aa12.67□□□□□ -0.38
NUP50-215ENST00000484186 GAS2L2Q8NHY3 880 aa12.67□□□□□ -0.38
NUP50-215ENST00000484186 PARP3Q9Y6F1 533 aa12.67□□□□□ -0.38
NUP50-215ENST00000484186 GNAT3A8MTJ3 354 aa12.66□□□□□ -0.38
NUP50-215ENST00000484186 CYP19A1P11511 503 aaPredicted RBP12.66□□□□□ -0.38
NUP50-215ENST00000484186 TGFB2P61812 414 aa12.66□□□□□ -0.38
NUP50-215ENST00000484186 VSIG10Q8N0Z9 540 aa12.66□□□□□ -0.38
NUP50-215ENST00000484186 IL17REQ8NFR9 667 aa12.66□□□□□ -0.38
NUP50-215ENST00000484186 CCDC87Q9NVE4 849 aa12.66□□□□□ -0.38
NUP50-215ENST00000484186 SRP68Q9UHB9 627 aaKnown RBP12.66□□□□□ -0.38
NUP50-215ENST00000484186 NUDCQ9Y266 331 aa12.66□□□□□ -0.38
NUP50-215ENST00000484186 MRC1P22897 1456 aa12.65□□□□□ -0.38
NUP50-215ENST00000484186 PPP2R1AP30153 589 aa12.65□□□□□ -0.38
NUP50-215ENST00000484186 WWC3Q9ULE0 1092 aa12.65□□□□□ -0.38
NUP50-215ENST00000484186 TJP1Q07157 1748 aa12.65□□□□□ -0.38
NUP50-215ENST00000484186 USP42Q9H9J4 1324 aaKnown RBP12.64□□□□□ -0.39
NUP50-215ENST00000484186 CICQ96RK0 1608 aaPredicted RBP12.64□□□□□ -0.39
NUP50-215ENST00000484186 PRKAR2BP31323 418 aa12.64□□□□□ -0.39
NUP50-215ENST00000484186 TEFQ10587 303 aa12.64□□□□□ -0.39
NUP50-215ENST00000484186 FKBP8Q14318 412 aa12.64□□□□□ -0.39
NUP50-215ENST00000484186 TTC5Q8N0Z6 440 aa12.64□□□□□ -0.39
NUP50-215ENST00000484186 PHACTR3Q96KR7 559 aa12.64□□□□□ -0.39
NUP50-215ENST00000484186 RSPH6AQ9H0K4 717 aa12.64□□□□□ -0.39
NUP50-215ENST00000484186 ADAMTS7Q9UKP4 1686 aa12.64□□□□□ -0.39
NUP50-215ENST00000484186 SOS1Q07889 1333 aaPredicted RBP12.63□□□□□ -0.39
NUP50-215ENST00000484186 A0A0G2JLW4 131 aa12.63□□□□□ -0.39
NUP50-215ENST00000484186 ZPR1O75312 459 aa12.63□□□□□ -0.39
NUP50-215ENST00000484186 C10orf71Q711Q0 1435 aa12.62□□□□□ -0.39
NUP50-215ENST00000484186 KCPQ6ZWJ8 1503 aa12.62□□□□□ -0.39
NUP50-215ENST00000484186 PXDNLA1KZ92 1463 aa12.62□□□□□ -0.39
NUP50-215ENST00000484186 U2AF1L5P0DN76 240 aaPredicted RBP12.62□□□□□ -0.39
NUP50-215ENST00000484186 TM4SF1P30408 202 aa12.62□□□□□ -0.39
NUP50-215ENST00000484186 C1QTNF8P60827 252 aa12.62□□□□□ -0.39
NUP50-215ENST00000484186 U2AF1Q01081 240 aaKnown RBP eCLIP12.62□□□□□ -0.39
NUP50-215ENST00000484186 USPL1Q5W0Q7 1092 aa12.62□□□□□ -0.39
NUP50-215ENST00000484186 ZNF790Q6PG37 636 aa12.62□□□□□ -0.39
NUP50-215ENST00000484186 ZBTB1Q9Y2K1 713 aa12.62□□□□□ -0.39
NUP50-215ENST00000484186 VIRMAQ69YN4 1812 aaKnown RBP12.62□□□□□ -0.39
NUP50-215ENST00000484186 C4AP0C0L4 1744 aa12.62□□□□□ -0.39
NUP50-215ENST00000484186 GOLGB1Q14789 3259 aaKnown RBP12.61□□□□□ -0.39
NUP50-215ENST00000484186 GIGYF1O75420 1035 aaPredicted RBP12.61□□□□□ -0.39
NUP50-215ENST00000484186 FCHSD2O94868 740 aa12.61□□□□□ -0.39
NUP50-215ENST00000484186 STARD3NLO95772 234 aa12.61□□□□□ -0.39
NUP50-215ENST00000484186 DPEP1P16444 411 aa12.61□□□□□ -0.39
NUP50-215ENST00000484186 DDR1Q08345 913 aa12.61□□□□□ -0.39
NUP50-215ENST00000484186 TEX13AQ9BXU3 409 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 8459.7 ms