RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 CCDC9Q9Y3X0 531 aaKnown RBP9.26□□□□□ -0.93
UPF3A-207ENST00000481131 M0R2N6 131 aa9.25□□□□□ -0.93
UPF3A-207ENST00000481131 ETNK1Q9HBU6 452 aa9.25□□□□□ -0.93
UPF3A-207ENST00000481131 CXXC1Q9P0U4 656 aaPredicted RBP9.25□□□□□ -0.93
UPF3A-207ENST00000481131 RBM19Q9Y4C8 960 aaKnown RBP9.25□□□□□ -0.93
UPF3A-207ENST00000481131 WASF2Q9Y6W5 498 aa9.25□□□□□ -0.93
UPF3A-207ENST00000481131 BMP1P13497 986 aa9.24□□□□□ -0.93
UPF3A-207ENST00000481131 GDF10P55107 478 aa9.24□□□□□ -0.93
UPF3A-207ENST00000481131 NNTQ13423 1086 aa9.24□□□□□ -0.93
UPF3A-207ENST00000481131 TMCO4Q5TGY1 634 aa9.24□□□□□ -0.93
UPF3A-207ENST00000481131 GAS2L2Q8NHY3 880 aa9.24□□□□□ -0.93
UPF3A-207ENST00000481131 WASLO00401 505 aaPredicted RBP9.23□□□□□ -0.93
UPF3A-207ENST00000481131 WEE1P30291 646 aa9.23□□□□□ -0.93
UPF3A-207ENST00000481131 C1orf216Q8TAB5 229 aa9.23□□□□□ -0.93
UPF3A-207ENST00000481131 PURBQ96QR8 312 aaKnown RBP9.23□□□□□ -0.93
UPF3A-207ENST00000481131 HINFPQ9BQA5 517 aa9.23□□□□□ -0.93
UPF3A-207ENST00000481131 ESF1Q9H501 851 aaKnown RBP9.23□□□□□ -0.93
UPF3A-207ENST00000481131 INHAP05111 366 aa9.22□□□□□ -0.93
UPF3A-207ENST00000481131 SNRPBP14678 240 aaKnown RBP9.22□□□□□ -0.93
UPF3A-207ENST00000481131 TAS1R3Q7RTX0 852 aa9.22□□□□□ -0.93
UPF3A-207ENST00000481131 CYP2U1Q7Z449 544 aa9.22□□□□□ -0.93
UPF3A-207ENST00000481131 TRIM46Q7Z4K8 759 aa9.22□□□□□ -0.93
UPF3A-207ENST00000481131 KDF1Q8NAX2 398 aaPredicted RBP9.22□□□□□ -0.93
UPF3A-207ENST00000481131 KLF16Q9BXK1 252 aaPredicted RBP9.22□□□□□ -0.93
UPF3A-207ENST00000481131 PGPEP1Q9NXJ5 209 aa9.22□□□□□ -0.93
UPF3A-207ENST00000481131 EMILIN1Q9Y6C2 1016 aa9.22□□□□□ -0.93
UPF3A-207ENST00000481131 ARID4AP29374 1257 aaPredicted RBP9.21□□□□□ -0.94
UPF3A-207ENST00000481131 EPHA4P54764 986 aa9.21□□□□□ -0.94
UPF3A-207ENST00000481131 SND1Q7KZF4 910 aaKnown RBP eCLIP9.21□□□□□ -0.94
UPF3A-207ENST00000481131 TNS4Q8IZW8 715 aa9.21□□□□□ -0.94
UPF3A-207ENST00000481131 CCER1Q8TC90 406 aaPredicted RBP9.21□□□□□ -0.94
UPF3A-207ENST00000481131 C11orf95C9JLR9 678 aaPredicted RBP9.2□□□□□ -0.94
UPF3A-207ENST00000481131 TIMP2P16035 220 aa9.2□□□□□ -0.94
UPF3A-207ENST00000481131 SERPINB4P48594 390 aa9.2□□□□□ -0.94
UPF3A-207ENST00000481131 MFAP1P55081 439 aaKnown RBP9.2□□□□□ -0.94
UPF3A-207ENST00000481131 CBLBQ13191 982 aa9.2□□□□□ -0.94
UPF3A-207ENST00000481131 RAB6BQ9NRW1 208 aa9.2□□□□□ -0.94
UPF3A-207ENST00000481131 SERTAD1Q9UHV2 236 aa9.2□□□□□ -0.94
UPF3A-207ENST00000481131 CAPN5O15484 640 aaPredicted RBP9.19□□□□□ -0.94
UPF3A-207ENST00000481131 GNRH1P01148 92 aa9.19□□□□□ -0.94
UPF3A-207ENST00000481131 FKBP5Q13451 457 aaPredicted RBP9.19□□□□□ -0.94
UPF3A-207ENST00000481131 CAPN12Q6ZSI9 719 aa9.19□□□□□ -0.94
UPF3A-207ENST00000481131 ITPKCQ96DU7 683 aa9.19□□□□□ -0.94
UPF3A-207ENST00000481131 SLC4A9Q96Q91 983 aa9.19□□□□□ -0.94
UPF3A-207ENST00000481131 ARHGEF10LQ9HCE6 1279 aa9.19□□□□□ -0.94
UPF3A-207ENST00000481131 C21orf2O43822 256 aa9.18□□□□□ -0.94
UPF3A-207ENST00000481131 IL2RAP01589 272 aa9.18□□□□□ -0.94
UPF3A-207ENST00000481131 ADH1AP07327 375 aa9.18□□□□□ -0.94
UPF3A-207ENST00000481131 NFX1Q12986 1120 aaKnown RBP9.18□□□□□ -0.94
UPF3A-207ENST00000481131 TRIM52Q96A61 297 aa9.18□□□□□ -0.94
UPF3A-207ENST00000481131 ZFAND3Q9H8U3 227 aa9.18□□□□□ -0.94
UPF3A-207ENST00000481131 BACH1O14867 736 aa9.17□□□□□ -0.94
UPF3A-207ENST00000481131 FOXK2Q01167 660 aa9.17□□□□□ -0.94
UPF3A-207ENST00000481131 Q6ZVU0 165 aa9.17□□□□□ -0.94
UPF3A-207ENST00000481131 RGS22Q8NE09 1264 aa9.17□□□□□ -0.94
UPF3A-207ENST00000481131 TSPAN10Q9H1Z9 355 aaPredicted RBP9.17□□□□□ -0.94
UPF3A-207ENST00000481131 ZIC2O95409 532 aaPredicted RBP9.16□□□□□ -0.94
UPF3A-207ENST00000481131 WDR4P57081 412 aaKnown RBP9.16□□□□□ -0.94
UPF3A-207ENST00000481131 LCE2CQ5TA81 110 aa9.16□□□□□ -0.94
UPF3A-207ENST00000481131 XAGE2Q96GT9 111 aa9.16□□□□□ -0.94
UPF3A-207ENST00000481131 TRIM47Q96LD4 638 aa9.16□□□□□ -0.94
UPF3A-207ENST00000481131 MKNK1Q9BUB5 465 aa9.16□□□□□ -0.94
UPF3A-207ENST00000481131 SEPT3Q9UH03 358 aa9.16□□□□□ -0.94
UPF3A-207ENST00000481131 HRH3Q9Y5N1 445 aa9.16□□□□□ -0.94
UPF3A-207ENST00000481131 SOWAHDA6NJG2 315 aa9.15□□□□□ -0.94
UPF3A-207ENST00000481131 IGFBP4P22692 258 aa9.15□□□□□ -0.94
UPF3A-207ENST00000481131 ESCO1Q5FWF5 840 aa9.15□□□□□ -0.94
UPF3A-207ENST00000481131 SCG3Q8WXD2 468 aaKnown RBP9.15□□□□□ -0.94
UPF3A-207ENST00000481131 AGBL1Q96MI9 1066 aa9.15□□□□□ -0.94
UPF3A-207ENST00000481131 SCHIP1Q9P0W5 487 aaPredicted RBP9.15□□□□□ -0.94
UPF3A-207ENST00000481131 USP3Q9Y6I4 520 aa9.15□□□□□ -0.94
UPF3A-207ENST00000481131 A0A1W2PRU2 124 aa9.14□□□□□ -0.95
UPF3A-207ENST00000481131 WFS1O76024 890 aa9.14□□□□□ -0.95
UPF3A-207ENST00000481131 SMTNP53814 917 aa9.14□□□□□ -0.95
UPF3A-207ENST00000481131 MTFR1Q15390 333 aa9.14□□□□□ -0.95
UPF3A-207ENST00000481131 TBCELQ5QJ74 424 aa9.14□□□□□ -0.95
UPF3A-207ENST00000481131 MTMR7Q9Y216 660 aa9.14□□□□□ -0.95
UPF3A-207ENST00000481131 A6NJY4 79 aa9.13□□□□□ -0.95
UPF3A-207ENST00000481131 PTGIRP43119 386 aa9.13□□□□□ -0.95
UPF3A-207ENST00000481131 ZNF211Q13398 564 aaPredicted RBP9.13□□□□□ -0.95
UPF3A-207ENST00000481131 CNKSR1Q969H4 720 aa9.13□□□□□ -0.95
UPF3A-207ENST00000481131 IQSEC3Q9UPP2 1182 aaPredicted RBP9.13□□□□□ -0.95
UPF3A-207ENST00000481131 ATAD2Q6PL18 1390 aa9.12□□□□□ -0.95
UPF3A-207ENST00000481131 FOXO3O43524 673 aa9.12□□□□□ -0.95
UPF3A-207ENST00000481131 CLN3Q13286 438 aa9.12□□□□□ -0.95
UPF3A-207ENST00000481131 CCDC27Q2M243 656 aa9.12□□□□□ -0.95
UPF3A-207ENST00000481131 SLC9A9Q8IVB4 645 aa9.12□□□□□ -0.95
UPF3A-207ENST00000481131 GTF3C2Q8WUA4 911 aaPredicted RBP9.12□□□□□ -0.95
UPF3A-207ENST00000481131 ZFP42Q96MM3 310 aa9.12□□□□□ -0.95
UPF3A-207ENST00000481131 ESYT1Q9BSJ8 1104 aa9.12□□□□□ -0.95
UPF3A-207ENST00000481131 FHDC1Q9C0D6 1143 aaPredicted RBP9.12□□□□□ -0.95
UPF3A-207ENST00000481131 SENP2Q9HC62 589 aa9.12□□□□□ -0.95
UPF3A-207ENST00000481131 ZNF295-AS1Q8N0V1 137 aa9.11□□□□□ -0.95
UPF3A-207ENST00000481131 COL26A1Q96A83 441 aa9.11□□□□□ -0.95
UPF3A-207ENST00000481131 ANO2Q9NQ90 1003 aa9.11□□□□□ -0.95
UPF3A-207ENST00000481131 DNMT3AQ9Y6K1 912 aaPredicted RBP9.11□□□□□ -0.95
UPF3A-207ENST00000481131 WIPF1O43516 503 aa9.1□□□□□ -0.95
UPF3A-207ENST00000481131 ABL1P00519 1130 aa9.1□□□□□ -0.95
UPF3A-207ENST00000481131 RELBQ01201 579 aa9.1□□□□□ -0.95
UPF3A-207ENST00000481131 TLR1Q15399 786 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms