RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 DCAF5Q96JK2 942 aa18.32■□□□□ 0.52
ABCF1-206ENST00000479542 AMOTQ4VCS5 1084 aa18.31■□□□□ 0.52
ABCF1-206ENST00000479542 NLGN1Q8N2Q7 840 aa18.31■□□□□ 0.52
ABCF1-206ENST00000479542 KDRP35968 1356 aa18.3■□□□□ 0.52
ABCF1-206ENST00000479542 TGFB2P61812 414 aa18.3■□□□□ 0.52
ABCF1-206ENST00000479542 PLEKHO1Q53GL0 409 aaPredicted RBP18.3■□□□□ 0.52
ABCF1-206ENST00000479542 ATP10DQ9P241 1426 aa18.3■□□□□ 0.52
ABCF1-206ENST00000479542 GNPATO15228 680 aa18.29■□□□□ 0.52
ABCF1-206ENST00000479542 PHF14O94880 888 aa18.29■□□□□ 0.52
ABCF1-206ENST00000479542 EIF4G2P78344 907 aaKnown RBP eCLIP18.29■□□□□ 0.52
ABCF1-206ENST00000479542 TRAPPC3LQ5T215 181 aa18.28■□□□□ 0.52
ABCF1-206ENST00000479542 RTCBQ9Y3I0 505 aaKnown RBP18.28■□□□□ 0.52
ABCF1-206ENST00000479542 CNTNAP4Q9C0A0 1308 aa18.27■□□□□ 0.52
ABCF1-206ENST00000479542 GPBP1L1Q9HC44 474 aaPredicted RBP18.27■□□□□ 0.52
ABCF1-206ENST00000479542 RPS6KA4O75676 772 aa18.26■□□□□ 0.51
ABCF1-206ENST00000479542 SLC4A9Q96Q91 983 aa18.26■□□□□ 0.51
ABCF1-206ENST00000479542 PANK3Q9H999 370 aa18.26■□□□□ 0.51
ABCF1-206ENST00000479542 MMP10P09238 476 aa18.25■□□□□ 0.51
ABCF1-206ENST00000479542 KIF13BQ9NQT8 1826 aa18.25■□□□□ 0.51
ABCF1-206ENST00000479542 CICQ96RK0 1608 aaPredicted RBP18.24■□□□□ 0.51
ABCF1-206ENST00000479542 SMIM5Q71RC9 77 aa18.24■□□□□ 0.51
ABCF1-206ENST00000479542 ARHGEF1Q92888 912 aaKnown RBP18.23■□□□□ 0.51
ABCF1-206ENST00000479542 CEP350Q5VT06 3117 aa18.23■□□□□ 0.51
ABCF1-206ENST00000479542 TNNT2P45379 298 aaPredicted RBP18.22■□□□□ 0.51
ABCF1-206ENST00000479542 CABP4P57796 275 aa18.22■□□□□ 0.51
ABCF1-206ENST00000479542 HSPA5P11021 654 aaKnown RBP18.21■□□□□ 0.51
ABCF1-206ENST00000479542 GYS1P13807 737 aa18.21■□□□□ 0.51
ABCF1-206ENST00000479542 MTHFSP49914 203 aa18.21■□□□□ 0.51
ABCF1-206ENST00000479542 ZNF530Q6P9A1 599 aaPredicted RBP18.21■□□□□ 0.51
ABCF1-206ENST00000479542 RBM42Q9BTD8 480 aaKnown RBP18.21■□□□□ 0.51
ABCF1-206ENST00000479542 KDM6AO15550 1401 aaPredicted RBP18.21■□□□□ 0.51
ABCF1-206ENST00000479542 PXDNLA1KZ92 1463 aa18.2■□□□□ 0.5
ABCF1-206ENST00000479542 HSPA6P17066 643 aa18.2■□□□□ 0.5
ABCF1-206ENST00000479542 RFC4P35249 363 aa18.2■□□□□ 0.5
ABCF1-206ENST00000479542 CCDC87Q9NVE4 849 aa18.2■□□□□ 0.5
ABCF1-206ENST00000479542 C10orf71Q711Q0 1435 aa18.2■□□□□ 0.5
ABCF1-206ENST00000479542 COL5A3P25940 1745 aaPredicted RBP18.2■□□□□ 0.5
ABCF1-206ENST00000479542 C1orf141Q5JVX7 400 aa18.19■□□□□ 0.5
ABCF1-206ENST00000479542 MORC1Q86VD1 984 aa18.19■□□□□ 0.5
ABCF1-206ENST00000479542 POLR3GLQ9BT43 218 aa18.18■□□□□ 0.5
ABCF1-206ENST00000479542 KNSTRNQ9Y448 316 aa18.18■□□□□ 0.5
ABCF1-206ENST00000479542 KIF3CO14782 793 aa18.17■□□□□ 0.5
ABCF1-206ENST00000479542 IL13P35225 146 aa18.17■□□□□ 0.5
ABCF1-206ENST00000479542 NFATC2IPQ8NCF5 419 aa18.17■□□□□ 0.5
ABCF1-206ENST00000479542 PCGF6Q9BYE7 350 aa18.17■□□□□ 0.5
ABCF1-206ENST00000479542 PARP3Q9Y6F1 533 aa18.17■□□□□ 0.5
ABCF1-206ENST00000479542 KIAA1551Q9HCM1 1747 aa18.17■□□□□ 0.5
ABCF1-206ENST00000479542 MYH14Q7Z406 1995 aaKnown RBP18.16■□□□□ 0.5
ABCF1-206ENST00000479542 CRKLP46109 303 aaKnown RBP18.15■□□□□ 0.5
ABCF1-206ENST00000479542 AKAP4Q5JQC9 854 aa18.15■□□□□ 0.5
ABCF1-206ENST00000479542 SULT6B1Q6IMI4 303 aa18.15■□□□□ 0.5
ABCF1-206ENST00000479542 C4AP0C0L4 1744 aa18.15■□□□□ 0.5
ABCF1-206ENST00000479542 A0A0G2JLW4 131 aa18.14■□□□□ 0.49
ABCF1-206ENST00000479542 KCNA3P22001 575 aa18.14■□□□□ 0.49
ABCF1-206ENST00000479542 AMER1Q5JTC6 1135 aaPredicted RBP18.14■□□□□ 0.49
ABCF1-206ENST00000479542 AEBP1Q8IUX7 1158 aa18.14■□□□□ 0.49
ABCF1-206ENST00000479542 PTCD1O75127 700 aaKnown RBP18.13■□□□□ 0.49
ABCF1-206ENST00000479542 DPEP1P16444 411 aa18.13■□□□□ 0.49
ABCF1-206ENST00000479542 BCS1LQ9Y276 419 aa18.13■□□□□ 0.49
ABCF1-206ENST00000479542 USP42Q9H9J4 1324 aaKnown RBP18.13■□□□□ 0.49
ABCF1-206ENST00000479542 TOMM70O94826 608 aa18.12■□□□□ 0.49
ABCF1-206ENST00000479542 TM4SF1P30408 202 aa18.12■□□□□ 0.49
ABCF1-206ENST00000479542 IFFO2Q5TF58 517 aa18.12■□□□□ 0.49
ABCF1-206ENST00000479542 SLC52A2Q9HAB3 445 aa18.12■□□□□ 0.49
ABCF1-206ENST00000479542 PIM2Q9P1W9 311 aa18.12■□□□□ 0.49
ABCF1-206ENST00000479542 BRCA1P38398 1863 aaKnown RBP18.12■□□□□ 0.49
ABCF1-206ENST00000479542 FCHSD2O94868 740 aa18.11■□□□□ 0.49
ABCF1-206ENST00000479542 INTS5Q6P9B9 1019 aaKnown RBP18.11■□□□□ 0.49
ABCF1-206ENST00000479542 ZNF526Q8TF50 670 aaPredicted RBP18.11■□□□□ 0.49
ABCF1-206ENST00000479542 N4BP2Q86UW6 1770 aaPredicted RBP18.1■□□□□ 0.49
ABCF1-206ENST00000479542 SCN11AQ9UI33 1791 aa18.1■□□□□ 0.49
ABCF1-206ENST00000479542 ARHGAP27Q6ZUM4 889 aa18.1■□□□□ 0.49
ABCF1-206ENST00000479542 VSIG10Q8N0Z9 540 aa18.1■□□□□ 0.49
ABCF1-206ENST00000479542 FKBP8Q14318 412 aa18.09■□□□□ 0.49
ABCF1-206ENST00000479542 WWC3Q9ULE0 1092 aa18.09■□□□□ 0.49
ABCF1-206ENST00000479542 ARFGEF1Q9Y6D6 1849 aa18.09■□□□□ 0.49
ABCF1-206ENST00000479542 MRC1P22897 1456 aa18.08■□□□□ 0.49
ABCF1-206ENST00000479542 PER1O15534 1290 aaPredicted RBP18.08■□□□□ 0.48
ABCF1-206ENST00000479542 APLP1P51693 650 aa18.08■□□□□ 0.48
ABCF1-206ENST00000479542 TJP1Q07157 1748 aa18.07■□□□□ 0.48
ABCF1-206ENST00000479542 ADAMTS7Q9UKP4 1686 aa18.07■□□□□ 0.48
ABCF1-206ENST00000479542 POLRMTO00411 1230 aaKnown RBP18.07■□□□□ 0.48
ABCF1-206ENST00000479542 RNMTO43148 476 aaKnown RBP18.07■□□□□ 0.48
ABCF1-206ENST00000479542 CYP19A1P11511 503 aaPredicted RBP18.07■□□□□ 0.48
ABCF1-206ENST00000479542 DALRD3Q5D0E6 543 aaKnown RBP18.07■□□□□ 0.48
ABCF1-206ENST00000479542 SOS1Q07889 1333 aaPredicted RBP18.06■□□□□ 0.48
ABCF1-206ENST00000479542 ZPR1O75312 459 aa18.06■□□□□ 0.48
ABCF1-206ENST00000479542 DDR1Q08345 913 aa18.06■□□□□ 0.48
ABCF1-206ENST00000479542 NPC1L1Q9UHC9 1359 aa18.05■□□□□ 0.48
ABCF1-206ENST00000479542 RBM46Q8TBY0 533 aaKnown RBP18.05■□□□□ 0.48
ABCF1-206ENST00000479542 LGR6Q9HBX8 967 aa18.05■□□□□ 0.48
ABCF1-206ENST00000479542 SRP68Q9UHB9 627 aaKnown RBP18.05■□□□□ 0.48
ABCF1-206ENST00000479542 NARFQ9UHQ1 456 aa18.05■□□□□ 0.48
ABCF1-206ENST00000479542 ZC3H4Q9UPT8 1303 aaKnown RBP18.04■□□□□ 0.48
ABCF1-206ENST00000479542 DNAJC10Q8IXB1 793 aa18.04■□□□□ 0.48
ABCF1-206ENST00000479542 C9orf131Q5VYM1 1079 aa18.03■□□□□ 0.48
ABCF1-206ENST00000479542 DNAJC5GQ8N7S2 189 aa18.03■□□□□ 0.48
ABCF1-206ENST00000479542 KIF7Q2M1P5 1343 aa18.02■□□□□ 0.48
ABCF1-206ENST00000479542 DIAPH1O60610 1272 aaKnown RBP18.02■□□□□ 0.48
ABCF1-206ENST00000479542 FSTL1Q12841 308 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms