RNA–Protein interactions for RNA: ENST00000479536.2

NF1-209, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-209ENST00000479536 ERVK-9P63128 1117 aa6.91□□□□□ -1.3
NF1-209ENST00000479536 CLN3Q13286 438 aa6.91□□□□□ -1.3
NF1-209ENST00000479536 SH3D19Q5HYK7 790 aa6.91□□□□□ -1.3
NF1-209ENST00000479536 WDR44Q5JSH3 913 aa6.91□□□□□ -1.3
NF1-209ENST00000479536 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.91□□□□□ -1.3
NF1-209ENST00000479536 SUV39H2Q9H5I1 410 aa6.91□□□□□ -1.3
NF1-209ENST00000479536 GOPCQ9HD26 462 aa6.91□□□□□ -1.3
NF1-209ENST00000479536 GDF2Q9UK05 429 aaPredicted RBP6.91□□□□□ -1.3
NF1-209ENST00000479536 CYP2U1Q7Z449 544 aa6.9□□□□□ -1.3
NF1-209ENST00000479536 KRTAP9-2Q9BYQ4 174 aa6.9□□□□□ -1.3
NF1-209ENST00000479536 ARHGEF10LQ9HCE6 1279 aa6.9□□□□□ -1.3
NF1-209ENST00000479536 PHF24Q9UPV7 400 aa6.9□□□□□ -1.3
NF1-209ENST00000479536 C1QTNF9BB2RNN3 333 aa6.89□□□□□ -1.31
NF1-209ENST00000479536 THBS1P07996 1170 aa6.89□□□□□ -1.31
NF1-209ENST00000479536 GOLGA6L1Q8N7Z2 621 aa6.89□□□□□ -1.31
NF1-209ENST00000479536 PHKA2P46019 1235 aa6.88□□□□□ -1.31
NF1-209ENST00000479536 SCTRP47872 440 aa6.88□□□□□ -1.31
NF1-209ENST00000479536 LINC00114Q6XXX2 140 aa6.88□□□□□ -1.31
NF1-209ENST00000479536 KRTAP9-6A0A140TA67 174 aa6.87□□□□□ -1.31
NF1-209ENST00000479536 ZBBXA8MT70 800 aa6.87□□□□□ -1.31
NF1-209ENST00000479536 BMP4P12644 408 aa6.87□□□□□ -1.31
NF1-209ENST00000479536 FLIIQ13045 1269 aa6.87□□□□□ -1.31
NF1-209ENST00000479536 RNF20Q5VTR2 975 aa6.87□□□□□ -1.31
NF1-209ENST00000479536 CD163Q86VB7 1156 aa6.87□□□□□ -1.31
NF1-209ENST00000479536 CCDC125Q86Z20 511 aa6.87□□□□□ -1.31
NF1-209ENST00000479536 ESF1Q9H501 851 aaKnown RBP6.87□□□□□ -1.31
NF1-209ENST00000479536 RAB6BQ9NRW1 208 aa6.87□□□□□ -1.31
NF1-209ENST00000479536 PIK3R2O00459 728 aa6.86□□□□□ -1.31
NF1-209ENST00000479536 GNB5O14775 395 aa6.86□□□□□ -1.31
NF1-209ENST00000479536 HOXB4P17483 251 aaPredicted RBP6.86□□□□□ -1.31
NF1-209ENST00000479536 PCMTD1Q96MG8 357 aaPredicted RBP6.86□□□□□ -1.31
NF1-209ENST00000479536 PCDHB11Q9Y5F2 797 aa6.86□□□□□ -1.31
NF1-209ENST00000479536 FBXO45P0C2W1 286 aa6.85□□□□□ -1.31
NF1-209ENST00000479536 CSB-PGBD3P0DP91 1061 aa6.85□□□□□ -1.31
NF1-209ENST00000479536 CHRNA4P43681 627 aa6.85□□□□□ -1.31
NF1-209ENST00000479536 PGBD3Q8N328 593 aa6.85□□□□□ -1.31
NF1-209ENST00000479536 TRIM34Q9BYJ4 488 aa6.85□□□□□ -1.31
NF1-209ENST00000479536 SEMA6BQ9H3T3 888 aa6.85□□□□□ -1.31
NF1-209ENST00000479536 OSBPL3Q9H4L5 887 aa6.85□□□□□ -1.31
NF1-209ENST00000479536 RUBCNLQ9H714 662 aa6.85□□□□□ -1.31
NF1-209ENST00000479536 GGA1Q9UJY5 639 aa6.85□□□□□ -1.31
NF1-209ENST00000479536 A0A1B0GTH6 734 aa6.84□□□□□ -1.31
NF1-209ENST00000479536 C2CD2LO14523 706 aa6.84□□□□□ -1.31
NF1-209ENST00000479536 CENPCQ03188 943 aa6.84□□□□□ -1.31
NF1-209ENST00000479536 SLCO4C1Q6ZQN7 724 aa6.84□□□□□ -1.31
NF1-209ENST00000479536 ABHD17AQ96GS6 310 aa6.84□□□□□ -1.31
NF1-209ENST00000479536 ITGB7P26010 798 aa6.83□□□□□ -1.32
NF1-209ENST00000479536 RFC5P40937 340 aa6.83□□□□□ -1.32
NF1-209ENST00000479536 UBAP2LQ14157 1087 aaKnown RBP6.83□□□□□ -1.32
NF1-209ENST00000479536 DOC2BQ14184 412 aa6.83□□□□□ -1.32
NF1-209ENST00000479536 ZMYM1Q5SVZ6 1142 aa6.83□□□□□ -1.32
NF1-209ENST00000479536 CNKSR1Q969H4 720 aa6.83□□□□□ -1.32
NF1-209ENST00000479536 BTBD6Q96KE9 485 aa6.83□□□□□ -1.32
NF1-209ENST00000479536 ZSCAN10Q96SZ4 725 aaPredicted RBP6.83□□□□□ -1.32
NF1-209ENST00000479536 ESYT1Q9BSJ8 1104 aa6.83□□□□□ -1.32
NF1-209ENST00000479536 ATXN7L1Q9ULK2 861 aaPredicted RBP6.83□□□□□ -1.32
NF1-209ENST00000479536 TRAK2O60296 914 aa6.82□□□□□ -1.32
NF1-209ENST00000479536 IL2RAP01589 272 aa6.82□□□□□ -1.32
NF1-209ENST00000479536 FGFR3P22607 806 aa6.82□□□□□ -1.32
NF1-209ENST00000479536 GTF2E1P29083 439 aaPredicted RBP6.82□□□□□ -1.32
NF1-209ENST00000479536 CTBSQ01459 385 aa6.82□□□□□ -1.32
NF1-209ENST00000479536 LBRQ14739 615 aaKnown RBP6.82□□□□□ -1.32
NF1-209ENST00000479536 EFHC2Q5JST6 749 aa6.82□□□□□ -1.32
NF1-209ENST00000479536 GNASQ5JWF2 1037 aa6.82□□□□□ -1.32
NF1-209ENST00000479536 NOP53Q9NZM5 478 aaKnown RBP6.82□□□□□ -1.32
NF1-209ENST00000479536 GNRH1P01148 92 aa6.81□□□□□ -1.32
NF1-209ENST00000479536 EPXP11678 715 aa6.81□□□□□ -1.32
NF1-209ENST00000479536 MSX1P28360 303 aa6.81□□□□□ -1.32
NF1-209ENST00000479536 NEURL1BA8MQ27 555 aa6.8□□□□□ -1.32
NF1-209ENST00000479536 BNIP3LO60238 219 aa6.8□□□□□ -1.32
NF1-209ENST00000479536 UBTFP17480 764 aaKnown RBP6.8□□□□□ -1.32
NF1-209ENST00000479536 DGKGP49619 791 aa6.8□□□□□ -1.32
NF1-209ENST00000479536 TMEM214Q6NUQ4 689 aaKnown RBP6.8□□□□□ -1.32
NF1-209ENST00000479536 C1orf115Q9H7X2 142 aa6.8□□□□□ -1.32
NF1-209ENST00000479536 C4orf17Q53FE4 359 aa6.79□□□□□ -1.32
NF1-209ENST00000479536 RNF135Q8IUD6 432 aa6.79□□□□□ -1.32
NF1-209ENST00000479536 KRTAP1-3Q8IUG1 177 aa6.79□□□□□ -1.32
NF1-209ENST00000479536 SCO2A0A1W2PP80 73 aa6.78□□□□□ -1.32
NF1-209ENST00000479536 ARID3AQ99856 593 aa6.78□□□□□ -1.32
NF1-209ENST00000479536 NDFIP2Q9NV92 336 aa6.78□□□□□ -1.32
NF1-209ENST00000479536 A6NJR5 290 aa6.77□□□□□ -1.33
NF1-209ENST00000479536 ARID3CA6NKF2 412 aa6.77□□□□□ -1.33
NF1-209ENST00000479536 APBB1O00213 710 aa6.77□□□□□ -1.33
NF1-209ENST00000479536 ARAFP10398 606 aa6.77□□□□□ -1.33
NF1-209ENST00000479536 GATA4P43694 442 aa6.77□□□□□ -1.33
NF1-209ENST00000479536 MCCD1P59942 119 aaPredicted RBP6.77□□□□□ -1.33
NF1-209ENST00000479536 NR1H3Q13133 447 aa6.77□□□□□ -1.33
NF1-209ENST00000479536 MCM6Q14566 821 aa6.77□□□□□ -1.33
NF1-209ENST00000479536 CHSY3Q70JA7 882 aa6.77□□□□□ -1.33
NF1-209ENST00000479536 CLUAP1Q96AJ1 413 aa6.77□□□□□ -1.33
NF1-209ENST00000479536 FHDC1Q9C0D6 1143 aaPredicted RBP6.77□□□□□ -1.33
NF1-209ENST00000479536 HRH3Q9Y5N1 445 aa6.77□□□□□ -1.33
NF1-209ENST00000479536 MYCP01106 439 aaPredicted RBP6.76□□□□□ -1.33
NF1-209ENST00000479536 ZNF592Q92610 1267 aa6.76□□□□□ -1.33
NF1-209ENST00000479536 XAGE2Q96GT9 111 aa6.76□□□□□ -1.33
NF1-209ENST00000479536 ZNF330Q9Y3S2 320 aaPredicted RBP6.76□□□□□ -1.33
NF1-209ENST00000479536 TMEM259Q4ZIN3 620 aa6.75□□□□□ -1.33
NF1-209ENST00000479536 GJD4Q96KN9 370 aaPredicted RBP6.75□□□□□ -1.33
NF1-209ENST00000479536 ESCO1Q5FWF5 840 aa6.74□□□□□ -1.33
NF1-209ENST00000479536 FIGNL1Q6PIW4 674 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms