RNA–Protein interactions for RNA: ENST00000476217.5

SSR3-206, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3 BASIC

Gene SSR3, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-206ENST00000476217 CCDC82Q8N4S0 544 aa9.38□□□□□ -0.91
SSR3-206ENST00000476217 NBPF15Q8N660 670 aa9.38□□□□□ -0.91
SSR3-206ENST00000476217 SLC4A9Q96Q91 983 aa9.38□□□□□ -0.91
SSR3-206ENST00000476217 ZSCAN10Q96SZ4 725 aaPredicted RBP9.38□□□□□ -0.91
SSR3-206ENST00000476217 GRIP2Q9C0E4 1043 aa9.38□□□□□ -0.91
SSR3-206ENST00000476217 DNMT3LQ9UJW3 386 aa9.38□□□□□ -0.91
SSR3-206ENST00000476217 SHROOM4Q9ULL8 1493 aa9.38□□□□□ -0.91
SSR3-206ENST00000476217 POTECB2RU33 542 aa9.37□□□□□ -0.91
SSR3-206ENST00000476217 TMEM229AB2RXF0 380 aa9.37□□□□□ -0.91
SSR3-206ENST00000476217 SPATA31C2B4DYI2 1134 aa9.37□□□□□ -0.91
SSR3-206ENST00000476217 TLR1Q15399 786 aa9.37□□□□□ -0.91
SSR3-206ENST00000476217 PBXIP1Q96AQ6 731 aa9.37□□□□□ -0.91
SSR3-206ENST00000476217 ZBTB7BO15156 539 aaPredicted RBP9.36□□□□□ -0.91
SSR3-206ENST00000476217 PPP1R15AO75807 674 aaPredicted RBP9.36□□□□□ -0.91
SSR3-206ENST00000476217 SMTNP53814 917 aa9.36□□□□□ -0.91
SSR3-206ENST00000476217 FIGNL2A6NMB9 653 aa9.35□□□□□ -0.91
SSR3-206ENST00000476217 USP17L15C9J2P7 530 aa9.35□□□□□ -0.91
SSR3-206ENST00000476217 USP17L10C9JJH3 530 aa9.35□□□□□ -0.91
SSR3-206ENST00000476217 USP17L13C9JLJ4 530 aa9.35□□□□□ -0.91
SSR3-206ENST00000476217 USP17L12C9JPN9 530 aa9.35□□□□□ -0.91
SSR3-206ENST00000476217 USP17L11C9JVI0 530 aa9.35□□□□□ -0.91
SSR3-206ENST00000476217 USP17L21D6R901 530 aa9.35□□□□□ -0.91
SSR3-206ENST00000476217 USP17L18D6R9N7 530 aa9.35□□□□□ -0.91
SSR3-206ENST00000476217 USP17L22D6RA61 530 aa9.35□□□□□ -0.91
SSR3-206ENST00000476217 USP17L17D6RBQ6 530 aa9.35□□□□□ -0.91
SSR3-206ENST00000476217 USP17L19D6RCP7 530 aa9.35□□□□□ -0.91
SSR3-206ENST00000476217 USP17L20D6RJB6 530 aa9.35□□□□□ -0.91
SSR3-206ENST00000476217 RFX1P22670 979 aa9.35□□□□□ -0.91
SSR3-206ENST00000476217 USP17L24Q0WX57 530 aa9.35□□□□□ -0.91
SSR3-206ENST00000476217 PTK7Q13308 1070 aa9.35□□□□□ -0.91
SSR3-206ENST00000476217 ELOAQ14241 798 aaKnown RBP9.35□□□□□ -0.91
SSR3-206ENST00000476217 MTFR1Q15390 333 aa9.35□□□□□ -0.91
SSR3-206ENST00000476217 GNASQ5JWF2 1037 aa9.35□□□□□ -0.91
SSR3-206ENST00000476217 TMEM214Q6NUQ4 689 aaKnown RBP9.35□□□□□ -0.91
SSR3-206ENST00000476217 TPCN2Q8NHX9 752 aa9.35□□□□□ -0.91
SSR3-206ENST00000476217 FHDC1Q9C0D6 1143 aaPredicted RBP9.35□□□□□ -0.91
SSR3-206ENST00000476217 SCRIBQ14160 1630 aa9.34□□□□□ -0.91
SSR3-206ENST00000476217 A6NJY4 79 aa9.34□□□□□ -0.91
SSR3-206ENST00000476217 SEC13P55735 322 aa9.34□□□□□ -0.91
SSR3-206ENST00000476217 TAS1R3Q7RTX0 852 aa9.34□□□□□ -0.91
SSR3-206ENST00000476217 PPARGC1BQ86YN6 1023 aaKnown RBP9.34□□□□□ -0.91
SSR3-206ENST00000476217 RHBDD1Q8TEB9 315 aa9.34□□□□□ -0.91
SSR3-206ENST00000476217 ZNF358Q9NW07 568 aa9.34□□□□□ -0.91
SSR3-206ENST00000476217 CDK2AP1O14519 115 aa9.33□□□□□ -0.92
SSR3-206ENST00000476217 ANKMY2Q8IV38 441 aa9.33□□□□□ -0.92
SSR3-206ENST00000476217 ZNF594Q96JF6 807 aaPredicted RBP9.33□□□□□ -0.92
SSR3-206ENST00000476217 C1orf115Q9H7X2 142 aa9.33□□□□□ -0.92
SSR3-206ENST00000476217 NXF1Q9UBU9 619 aaKnown RBP9.33□□□□□ -0.92
SSR3-206ENST00000476217 ATG7O95352 703 aa9.32□□□□□ -0.92
SSR3-206ENST00000476217 PRICKLE2Q7Z3G6 844 aa9.32□□□□□ -0.92
SSR3-206ENST00000476217 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.32□□□□□ -0.92
SSR3-206ENST00000476217 SERTAD1Q9UHV2 236 aa9.32□□□□□ -0.92
SSR3-206ENST00000476217 KIAA1024Q9UPX6 916 aa9.32□□□□□ -0.92
SSR3-206ENST00000476217 PTSQ03393 145 aa9.31□□□□□ -0.92
SSR3-206ENST00000476217 CRTC2Q53ET0 693 aaPredicted RBP9.31□□□□□ -0.92
SSR3-206ENST00000476217 NBPF10Q6P3W6 841 aaKnown RBP9.31□□□□□ -0.92
SSR3-206ENST00000476217 FAM200AQ8TCP9 573 aa9.31□□□□□ -0.92
SSR3-206ENST00000476217 SLC16A10Q8TF71 515 aa9.31□□□□□ -0.92
SSR3-206ENST00000476217 NIFKQ9BYG3 293 aaKnown RBP9.31□□□□□ -0.92
SSR3-206ENST00000476217 CHMP3Q9Y3E7 222 aa9.31□□□□□ -0.92
SSR3-206ENST00000476217 ACIN1Q9UKV3 1341 aaKnown RBP9.31□□□□□ -0.92
SSR3-206ENST00000476217 SUPT5HO00267 1087 aaKnown RBP9.3□□□□□ -0.92
SSR3-206ENST00000476217 SRPK2P78362 688 aaKnown RBP9.3□□□□□ -0.92
SSR3-206ENST00000476217 GAS2L2Q8NHY3 880 aa9.3□□□□□ -0.92
SSR3-206ENST00000476217 GMCL1Q96IK5 515 aa9.3□□□□□ -0.92
SSR3-206ENST00000476217 DYRK1BQ9Y463 629 aa9.3□□□□□ -0.92
SSR3-206ENST00000476217 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.29□□□□□ -0.92
SSR3-206ENST00000476217 SLC35F4A4IF30 521 aa9.29□□□□□ -0.92
SSR3-206ENST00000476217 SOBPA7XYQ1 873 aa9.29□□□□□ -0.92
SSR3-206ENST00000476217 DKK1O94907 266 aa9.29□□□□□ -0.92
SSR3-206ENST00000476217 DPYDQ12882 1025 aa9.29□□□□□ -0.92
SSR3-206ENST00000476217 SCHIP1Q9P0W5 487 aaPredicted RBP9.29□□□□□ -0.92
SSR3-206ENST00000476217 A0A1B0GTH6 734 aa9.28□□□□□ -0.92
SSR3-206ENST00000476217 STAU1O95793 577 aaKnown RBP9.28□□□□□ -0.92
SSR3-206ENST00000476217 EPHA4P54764 986 aa9.28□□□□□ -0.92
SSR3-206ENST00000476217 POU4F2Q12837 409 aa9.28□□□□□ -0.92
SSR3-206ENST00000476217 SWI5Q1ZZU3 235 aa9.28□□□□□ -0.92
SSR3-206ENST00000476217 C1orf216Q8TAB5 229 aa9.28□□□□□ -0.92
SSR3-206ENST00000476217 NOVA2Q9UNW9 492 aaKnown RBP9.28□□□□□ -0.92
SSR3-206ENST00000476217 TERTO14746 1132 aaKnown RBP9.27□□□□□ -0.93
SSR3-206ENST00000476217 CCDC155Q8N6L0 562 aa9.27□□□□□ -0.93
SSR3-206ENST00000476217 TIMMDC1Q9NPL8 285 aa9.27□□□□□ -0.93
SSR3-206ENST00000476217 IQSEC3Q9UPP2 1182 aaPredicted RBP9.27□□□□□ -0.93
SSR3-206ENST00000476217 SFI1A8K8P3 1242 aa9.26□□□□□ -0.93
SSR3-206ENST00000476217 H7C1W4 665 aa9.26□□□□□ -0.93
SSR3-206ENST00000476217 FOXK2Q01167 660 aa9.26□□□□□ -0.93
SSR3-206ENST00000476217 NBPF1Q3BBV0 1214 aa9.26□□□□□ -0.93
SSR3-206ENST00000476217 C4orf17Q53FE4 359 aa9.26□□□□□ -0.93
SSR3-206ENST00000476217 ARXQ96QS3 562 aa9.26□□□□□ -0.93
SSR3-206ENST00000476217 PPFIA3O75145 1194 aa9.25□□□□□ -0.93
SSR3-206ENST00000476217 PSMA6P60900 246 aaKnown RBP9.25□□□□□ -0.93
SSR3-206ENST00000476217 STAG2Q8N3U4 1231 aa9.25□□□□□ -0.93
SSR3-206ENST00000476217 SENP3-EIF4A1A0A087X0R7 540 aa9.24□□□□□ -0.93
SSR3-206ENST00000476217 H3BM21 787 aa9.24□□□□□ -0.93
SSR3-206ENST00000476217 F11P03951 625 aa9.24□□□□□ -0.93
SSR3-206ENST00000476217 RHOQP17081 205 aa9.24□□□□□ -0.93
SSR3-206ENST00000476217 LBRQ14739 615 aaKnown RBP9.24□□□□□ -0.93
SSR3-206ENST00000476217 TEAD4Q15561 434 aa9.24□□□□□ -0.93
SSR3-206ENST00000476217 CDCA8Q53HL2 280 aa9.24□□□□□ -0.93
SSR3-206ENST00000476217 TNS4Q8IZW8 715 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms