RNA–Protein interactions for RNA: ENST00000475423.1

DKC1-208, Transcript of dyskerin pseudouridine synthase 1, humanhuman

TSL 2

Gene DKC1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-208ENST00000475423 ATP6V1AP38606 617 aa22.6■■□□□ 1.21
DKC1-208ENST00000475423 MORC1Q86VD1 984 aa22.59■■□□□ 1.21
DKC1-208ENST00000475423 DCAF5Q96JK2 942 aa22.59■■□□□ 1.21
DKC1-208ENST00000475423 HSP90AB1P08238 724 aaKnown RBP22.58■■□□□ 1.21
DKC1-208ENST00000475423 PLEKHO1Q53GL0 409 aaPredicted RBP22.58■■□□□ 1.21
DKC1-208ENST00000475423 AMOTQ4VCS5 1084 aa22.57■■□□□ 1.2
DKC1-208ENST00000475423 KDRP35968 1356 aa22.57■■□□□ 1.2
DKC1-208ENST00000475423 ZNF831Q5JPB2 1677 aa22.56■■□□□ 1.2
DKC1-208ENST00000475423 GNPATO15228 680 aa22.56■■□□□ 1.2
DKC1-208ENST00000475423 SLC4A9Q96Q91 983 aa22.55■■□□□ 1.2
DKC1-208ENST00000475423 KNSTRNQ9Y448 316 aa22.55■■□□□ 1.2
DKC1-208ENST00000475423 C1QTNF8P60827 252 aa22.54■■□□□ 1.2
DKC1-208ENST00000475423 AEBP1Q8IUX7 1158 aa22.54■■□□□ 1.2
DKC1-208ENST00000475423 KDM6AO15550 1401 aaPredicted RBP22.54■■□□□ 1.2
DKC1-208ENST00000475423 ZNF530Q6P9A1 599 aaPredicted RBP22.53■■□□□ 1.2
DKC1-208ENST00000475423 IL13P35225 146 aa22.52■■□□□ 1.2
DKC1-208ENST00000475423 AMER1Q5JTC6 1135 aaPredicted RBP22.52■■□□□ 1.2
DKC1-208ENST00000475423 CABP4P57796 275 aa22.51■■□□□ 1.19
DKC1-208ENST00000475423 RC3H1Q5TC82 1133 aaKnown RBP22.51■■□□□ 1.19
DKC1-208ENST00000475423 SULT6B1Q6IMI4 303 aa22.51■■□□□ 1.19
DKC1-208ENST00000475423 MTHFSP49914 203 aa22.5■■□□□ 1.19
DKC1-208ENST00000475423 RBM42Q9BTD8 480 aaKnown RBP22.5■■□□□ 1.19
DKC1-208ENST00000475423 RTCBQ9Y3I0 505 aaKnown RBP22.5■■□□□ 1.19
DKC1-208ENST00000475423 COL5A3P25940 1745 aaPredicted RBP22.49■■□□□ 1.19
DKC1-208ENST00000475423 TRAPPC3LQ5T215 181 aa22.49■■□□□ 1.19
DKC1-208ENST00000475423 CNTNAP4Q9C0A0 1308 aa22.49■■□□□ 1.19
DKC1-208ENST00000475423 C1orf141Q5JVX7 400 aa22.48■■□□□ 1.19
DKC1-208ENST00000475423 KIF7Q2M1P5 1343 aa22.48■■□□□ 1.19
DKC1-208ENST00000475423 ADRA2BP18089 450 aa22.47■■□□□ 1.19
DKC1-208ENST00000475423 GIGYF1O75420 1035 aaPredicted RBP22.46■■□□□ 1.19
DKC1-208ENST00000475423 RPS6KA4O75676 772 aa22.46■■□□□ 1.19
DKC1-208ENST00000475423 MMP10P09238 476 aa22.46■■□□□ 1.19
DKC1-208ENST00000475423 NLGN1Q8N2Q7 840 aa22.46■■□□□ 1.19
DKC1-208ENST00000475423 NFATC2IPQ8NCF5 419 aa22.46■■□□□ 1.19
DKC1-208ENST00000475423 ARHGEF1Q92888 912 aaKnown RBP22.46■■□□□ 1.19
DKC1-208ENST00000475423 MYH14Q7Z406 1995 aaKnown RBP22.46■■□□□ 1.19
DKC1-208ENST00000475423 PER1O15534 1290 aaPredicted RBP22.45■■□□□ 1.18
DKC1-208ENST00000475423 KIF13BQ9NQT8 1826 aa22.44■■□□□ 1.18
DKC1-208ENST00000475423 SCN11AQ9UI33 1791 aa22.43■■□□□ 1.18
DKC1-208ENST00000475423 SENP3-EIF4A1A0A087X0R7 540 aa22.42■■□□□ 1.18
DKC1-208ENST00000475423 PTCD1O75127 700 aaKnown RBP22.42■■□□□ 1.18
DKC1-208ENST00000475423 GYS1P13807 737 aa22.42■■□□□ 1.18
DKC1-208ENST00000475423 ATP10DQ9P241 1426 aa22.41■■□□□ 1.18
DKC1-208ENST00000475423 ADCY9O60503 1353 aa22.41■■□□□ 1.18
DKC1-208ENST00000475423 RFC4P35249 363 aa22.41■■□□□ 1.18
DKC1-208ENST00000475423 AKAP4Q5JQC9 854 aa22.41■■□□□ 1.18
DKC1-208ENST00000475423 CICQ96RK0 1608 aaPredicted RBP22.4■■□□□ 1.18
DKC1-208ENST00000475423 TGFB2P61812 414 aa22.4■■□□□ 1.18
DKC1-208ENST00000475423 WWC3Q9ULE0 1092 aa22.4■■□□□ 1.18
DKC1-208ENST00000475423 KIAA1551Q9HCM1 1747 aa22.4■■□□□ 1.18
DKC1-208ENST00000475423 CRKLP46109 303 aaKnown RBP22.39■■□□□ 1.17
DKC1-208ENST00000475423 C4AP0C0L4 1744 aa22.39■■□□□ 1.17
DKC1-208ENST00000475423 PXDNLA1KZ92 1463 aa22.39■■□□□ 1.17
DKC1-208ENST00000475423 TJP1Q07157 1748 aa22.38■■□□□ 1.17
DKC1-208ENST00000475423 C10orf71Q711Q0 1435 aa22.38■■□□□ 1.17
DKC1-208ENST00000475423 SLC52A2Q9HAB3 445 aa22.37■■□□□ 1.17
DKC1-208ENST00000475423 LGR6Q9HBX8 967 aa22.37■■□□□ 1.17
DKC1-208ENST00000475423 HMOX1P09601 288 aa22.36■■□□□ 1.17
DKC1-208ENST00000475423 CEP350Q5VT06 3117 aa22.35■■□□□ 1.17
DKC1-208ENST00000475423 N4BP2Q86UW6 1770 aaPredicted RBP22.35■■□□□ 1.17
DKC1-208ENST00000475423 CC2D1BQ5T0F9 858 aaKnown RBP22.35■■□□□ 1.17
DKC1-208ENST00000475423 INTS5Q6P9B9 1019 aaKnown RBP22.35■■□□□ 1.17
DKC1-208ENST00000475423 GPBP1L1Q9HC44 474 aaPredicted RBP22.35■■□□□ 1.17
DKC1-208ENST00000475423 CCDC87Q9NVE4 849 aa22.35■■□□□ 1.17
DKC1-208ENST00000475423 A0A0G2JLW4 131 aa22.34■■□□□ 1.17
DKC1-208ENST00000475423 RNMTO43148 476 aaKnown RBP22.34■■□□□ 1.17
DKC1-208ENST00000475423 DIAPH1O60610 1272 aaKnown RBP22.34■■□□□ 1.17
DKC1-208ENST00000475423 PARP3Q9Y6F1 533 aa22.34■■□□□ 1.17
DKC1-208ENST00000475423 NPC1L1Q9UHC9 1359 aa22.34■■□□□ 1.17
DKC1-208ENST00000475423 MRC1P22897 1456 aa22.34■■□□□ 1.17
DKC1-208ENST00000475423 USP42Q9H9J4 1324 aaKnown RBP22.33■■□□□ 1.17
DKC1-208ENST00000475423 MTHFSDQ2M296 383 aaKnown RBP22.33■■□□□ 1.17
DKC1-208ENST00000475423 VIRMAQ69YN4 1812 aaKnown RBP22.33■■□□□ 1.16
DKC1-208ENST00000475423 ADAMTS7Q9UKP4 1686 aa22.33■■□□□ 1.16
DKC1-208ENST00000475423 SRP68Q9UHB9 627 aaKnown RBP22.32■■□□□ 1.16
DKC1-208ENST00000475423 DPEP1P16444 411 aa22.31■■□□□ 1.16
DKC1-208ENST00000475423 FKBP8Q14318 412 aa22.31■■□□□ 1.16
DKC1-208ENST00000475423 DNAJC10Q8IXB1 793 aa22.31■■□□□ 1.16
DKC1-208ENST00000475423 BRCA1P38398 1863 aaKnown RBP22.3■■□□□ 1.16
DKC1-208ENST00000475423 BCS1LQ9Y276 419 aa22.3■■□□□ 1.16
DKC1-208ENST00000475423 CYP19A1P11511 503 aaPredicted RBP22.29■■□□□ 1.16
DKC1-208ENST00000475423 KCNA3P22001 575 aa22.29■■□□□ 1.16
DKC1-208ENST00000475423 SLC39A6Q13433 755 aa22.29■■□□□ 1.16
DKC1-208ENST00000475423 ZNF526Q8TF50 670 aaPredicted RBP22.29■■□□□ 1.16
DKC1-208ENST00000475423 COL3A1P02461 1466 aaPredicted RBP22.28■■□□□ 1.16
DKC1-208ENST00000475423 KCPQ6ZWJ8 1503 aa22.28■■□□□ 1.16
DKC1-208ENST00000475423 DDR1Q08345 913 aa22.28■■□□□ 1.16
DKC1-208ENST00000475423 SOS1Q07889 1333 aaPredicted RBP22.28■■□□□ 1.16
DKC1-208ENST00000475423 TM4SF1P30408 202 aa22.27■■□□□ 1.16
DKC1-208ENST00000475423 VSIG10Q8N0Z9 540 aa22.26■■□□□ 1.15
DKC1-208ENST00000475423 FCHSD2O94868 740 aa22.25■■□□□ 1.15
DKC1-208ENST00000475423 POLRMTO00411 1230 aaKnown RBP22.24■■□□□ 1.15
DKC1-208ENST00000475423 ZPR1O75312 459 aa22.24■■□□□ 1.15
DKC1-208ENST00000475423 ARHGAP27Q6ZUM4 889 aa22.24■■□□□ 1.15
DKC1-208ENST00000475423 UBR2Q8IWV8 1755 aa22.24■■□□□ 1.15
DKC1-208ENST00000475423 ARFGEF1Q9Y6D6 1849 aa22.24■■□□□ 1.15
DKC1-208ENST00000475423 USPL1Q5W0Q7 1092 aa22.23■■□□□ 1.15
DKC1-208ENST00000475423 PIM2Q9P1W9 311 aa22.23■■□□□ 1.15
DKC1-208ENST00000475423 NARFQ9UHQ1 456 aa22.23■■□□□ 1.15
DKC1-208ENST00000475423 KIF3CO14782 793 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms