RNA–Protein interactions for RNA: ENST00000475283.2

SUSD1-206, Transcript of sushi domain containing 1, humanhuman

TSL 3

Gene SUSD1, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD1-206ENST00000475283 LINC00116Q8NCU8 138 aa19.06■□□□□ 0.64
SUSD1-206ENST00000475283 CHD4Q14839 1912 aa19.06■□□□□ 0.64
SUSD1-206ENST00000475283 C1orf141Q5JVX7 400 aa19.04■□□□□ 0.64
SUSD1-206ENST00000475283 ZNF530Q6P9A1 599 aaPredicted RBP19.04■□□□□ 0.64
SUSD1-206ENST00000475283 GNPATO15228 680 aa19.03■□□□□ 0.64
SUSD1-206ENST00000475283 CABP4P57796 275 aa19.03■□□□□ 0.64
SUSD1-206ENST00000475283 ITPK1Q13572 414 aa19.03■□□□□ 0.64
SUSD1-206ENST00000475283 AMIGO3Q86WK7 504 aa19.03■□□□□ 0.64
SUSD1-206ENST00000475283 MTHFSP49914 203 aa19.02■□□□□ 0.64
SUSD1-206ENST00000475283 AMER1Q5JTC6 1135 aaPredicted RBP19.02■□□□□ 0.64
SUSD1-206ENST00000475283 SULT6B1Q6IMI4 303 aa19.02■□□□□ 0.64
SUSD1-206ENST00000475283 RBM42Q9BTD8 480 aaKnown RBP19.02■□□□□ 0.64
SUSD1-206ENST00000475283 IL13P35225 146 aa19.01■□□□□ 0.63
SUSD1-206ENST00000475283 SMIM5Q71RC9 77 aa19.01■□□□□ 0.63
SUSD1-206ENST00000475283 KIF7Q2M1P5 1343 aa19■□□□□ 0.63
SUSD1-206ENST00000475283 YBX3P16989 372 aaKnown RBP eCLIP19■□□□□ 0.63
SUSD1-206ENST00000475283 TRAPPC3LQ5T215 181 aa19■□□□□ 0.63
SUSD1-206ENST00000475283 AEBP1Q8IUX7 1158 aa19■□□□□ 0.63
SUSD1-206ENST00000475283 RTCBQ9Y3I0 505 aaKnown RBP19■□□□□ 0.63
SUSD1-206ENST00000475283 RC3H1Q5TC82 1133 aaKnown RBP18.99■□□□□ 0.63
SUSD1-206ENST00000475283 UBR3Q6ZT12 1888 aa18.99■□□□□ 0.63
SUSD1-206ENST00000475283 UTRNP46939 3433 aa18.98■□□□□ 0.63
SUSD1-206ENST00000475283 KDRP35968 1356 aa18.97■□□□□ 0.63
SUSD1-206ENST00000475283 PER1O15534 1290 aaPredicted RBP18.96■□□□□ 0.63
SUSD1-206ENST00000475283 NLGN1Q8N2Q7 840 aa18.96■□□□□ 0.63
SUSD1-206ENST00000475283 NFATC2IPQ8NCF5 419 aa18.96■□□□□ 0.63
SUSD1-206ENST00000475283 SLC4A9Q96Q91 983 aa18.96■□□□□ 0.63
SUSD1-206ENST00000475283 KDM6AO15550 1401 aaPredicted RBP18.96■□□□□ 0.63
SUSD1-206ENST00000475283 RPS6KA4O75676 772 aa18.95■□□□□ 0.62
SUSD1-206ENST00000475283 AKAP4Q5JQC9 854 aa18.95■□□□□ 0.62
SUSD1-206ENST00000475283 CNTNAP4Q9C0A0 1308 aa18.95■□□□□ 0.62
SUSD1-206ENST00000475283 ARHGEF1Q92888 912 aaKnown RBP18.94■□□□□ 0.62
SUSD1-206ENST00000475283 PTCD1O75127 700 aaKnown RBP18.93■□□□□ 0.62
SUSD1-206ENST00000475283 MMP10P09238 476 aa18.93■□□□□ 0.62
SUSD1-206ENST00000475283 RFC4P35249 363 aa18.93■□□□□ 0.62
SUSD1-206ENST00000475283 ZNF831Q5JPB2 1677 aa18.92■□□□□ 0.62
SUSD1-206ENST00000475283 DIAPH1O60610 1272 aaKnown RBP18.92■□□□□ 0.62
SUSD1-206ENST00000475283 C1QTNF8P60827 252 aa18.92■□□□□ 0.62
SUSD1-206ENST00000475283 CC2D1BQ5T0F9 858 aaKnown RBP18.92■□□□□ 0.62
SUSD1-206ENST00000475283 GIGYF1O75420 1035 aaPredicted RBP18.9■□□□□ 0.62
SUSD1-206ENST00000475283 HMOX1P09601 288 aa18.9■□□□□ 0.62
SUSD1-206ENST00000475283 CRKLP46109 303 aaKnown RBP18.89■□□□□ 0.61
SUSD1-206ENST00000475283 TGFB2P61812 414 aa18.89■□□□□ 0.61
SUSD1-206ENST00000475283 SLC52A2Q9HAB3 445 aa18.89■□□□□ 0.61
SUSD1-206ENST00000475283 GYS1P13807 737 aa18.88■□□□□ 0.61
SUSD1-206ENST00000475283 LGR6Q9HBX8 967 aa18.88■□□□□ 0.61
SUSD1-206ENST00000475283 PARP3Q9Y6F1 533 aa18.88■□□□□ 0.61
SUSD1-206ENST00000475283 NPC1L1Q9UHC9 1359 aa18.88■□□□□ 0.61
SUSD1-206ENST00000475283 RNMTO43148 476 aaKnown RBP18.87■□□□□ 0.61
SUSD1-206ENST00000475283 CCDC87Q9NVE4 849 aa18.87■□□□□ 0.61
SUSD1-206ENST00000475283 MTHFSDQ2M296 383 aaKnown RBP18.86■□□□□ 0.61
SUSD1-206ENST00000475283 WWC3Q9ULE0 1092 aa18.85■□□□□ 0.61
SUSD1-206ENST00000475283 COL5A3P25940 1745 aaPredicted RBP18.84■□□□□ 0.61
SUSD1-206ENST00000475283 SENP3-EIF4A1A0A087X0R7 540 aa18.83■□□□□ 0.6
SUSD1-206ENST00000475283 INTS5Q6P9B9 1019 aaKnown RBP18.83■□□□□ 0.6
SUSD1-206ENST00000475283 SCN11AQ9UI33 1791 aa18.83■□□□□ 0.6
SUSD1-206ENST00000475283 A0A0G2JLW4 131 aa18.82■□□□□ 0.6
SUSD1-206ENST00000475283 U2SURPO15042 1029 aaKnown RBP18.82■□□□□ 0.6
SUSD1-206ENST00000475283 CNGB1Q14028 1251 aaPredicted RBP18.82■□□□□ 0.6
SUSD1-206ENST00000475283 DNAJC10Q8IXB1 793 aa18.82■□□□□ 0.6
SUSD1-206ENST00000475283 GPBP1L1Q9HC44 474 aaPredicted RBP18.82■□□□□ 0.6
SUSD1-206ENST00000475283 ATP10DQ9P241 1426 aa18.82■□□□□ 0.6
SUSD1-206ENST00000475283 USP42Q9H9J4 1324 aaKnown RBP18.81■□□□□ 0.6
SUSD1-206ENST00000475283 MYH14Q7Z406 1995 aaKnown RBP18.81■□□□□ 0.6
SUSD1-206ENST00000475283 ZPR1O75312 459 aa18.81■□□□□ 0.6
SUSD1-206ENST00000475283 SLC39A6Q13433 755 aa18.81■□□□□ 0.6
SUSD1-206ENST00000475283 VSIG10Q8N0Z9 540 aa18.81■□□□□ 0.6
SUSD1-206ENST00000475283 CICQ96RK0 1608 aaPredicted RBP18.81■□□□□ 0.6
SUSD1-206ENST00000475283 PXDNLA1KZ92 1463 aa18.8■□□□□ 0.6
SUSD1-206ENST00000475283 GAS2L2Q8NHY3 880 aa18.8■□□□□ 0.6
SUSD1-206ENST00000475283 SRP68Q9UHB9 627 aaKnown RBP18.8■□□□□ 0.6
SUSD1-206ENST00000475283 BCS1LQ9Y276 419 aa18.8■□□□□ 0.6
SUSD1-206ENST00000475283 GOLGB1Q14789 3259 aaKnown RBP18.8■□□□□ 0.6
SUSD1-206ENST00000475283 C10orf71Q711Q0 1435 aa18.8■□□□□ 0.6
SUSD1-206ENST00000475283 CYP19A1P11511 503 aaPredicted RBP18.79■□□□□ 0.6
SUSD1-206ENST00000475283 DPEP1P16444 411 aa18.79■□□□□ 0.6
SUSD1-206ENST00000475283 FKBP8Q14318 412 aa18.79■□□□□ 0.6
SUSD1-206ENST00000475283 CFAP53Q96M91 514 aa18.79■□□□□ 0.6
SUSD1-206ENST00000475283 ADCY9O60503 1353 aa18.79■□□□□ 0.6
SUSD1-206ENST00000475283 MRC1P22897 1456 aa18.78■□□□□ 0.6
SUSD1-206ENST00000475283 TTC5Q8N0Z6 440 aa18.78■□□□□ 0.6
SUSD1-206ENST00000475283 KIF13BQ9NQT8 1826 aa18.78■□□□□ 0.6
SUSD1-206ENST00000475283 C4AP0C0L4 1744 aa18.77■□□□□ 0.6
SUSD1-206ENST00000475283 GNAT3A8MTJ3 354 aa18.77■□□□□ 0.6
SUSD1-206ENST00000475283 FCHSD2O94868 740 aa18.77■□□□□ 0.6
SUSD1-206ENST00000475283 TEFQ10587 303 aa18.77■□□□□ 0.6
SUSD1-206ENST00000475283 SOS1Q07889 1333 aaPredicted RBP18.76■□□□□ 0.59
SUSD1-206ENST00000475283 TM4SF1P30408 202 aa18.76■□□□□ 0.59
SUSD1-206ENST00000475283 USPL1Q5W0Q7 1092 aa18.76■□□□□ 0.59
SUSD1-206ENST00000475283 PIM2Q9P1W9 311 aa18.76■□□□□ 0.59
SUSD1-206ENST00000475283 NARFQ9UHQ1 456 aa18.76■□□□□ 0.59
SUSD1-206ENST00000475283 NUDCQ9Y266 331 aa18.76■□□□□ 0.59
SUSD1-206ENST00000475283 TJP1Q07157 1748 aa18.76■□□□□ 0.59
SUSD1-206ENST00000475283 STARD3NLO95772 234 aa18.75■□□□□ 0.59
SUSD1-206ENST00000475283 ARHGAP27Q6ZUM4 889 aa18.75■□□□□ 0.59
SUSD1-206ENST00000475283 IL17REQ8NFR9 667 aa18.75■□□□□ 0.59
SUSD1-206ENST00000475283 ZNF526Q8TF50 670 aaPredicted RBP18.75■□□□□ 0.59
SUSD1-206ENST00000475283 COL3A1P02461 1466 aaPredicted RBP18.75■□□□□ 0.59
SUSD1-206ENST00000475283 POLRMTO00411 1230 aaKnown RBP18.74■□□□□ 0.59
SUSD1-206ENST00000475283 DDR1Q08345 913 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms