RNA–Protein interactions for RNA: ENST00000474851.1

LSAMP-203, Transcript of limbic system associated membrane protein, humanhuman

TSL 5

Gene LSAMP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-203ENST00000474851 WNK3Q9BYP7 1800 aa9.69□□□□□ -0.86
LSAMP-203ENST00000474851 LGR6Q9HBX8 967 aa9.69□□□□□ -0.86
LSAMP-203ENST00000474851 ANKRD26Q9UPS8 1709 aa9.68□□□□□ -0.86
LSAMP-203ENST00000474851 KDM6AO15550 1401 aaPredicted RBP9.68□□□□□ -0.86
LSAMP-203ENST00000474851 CABP4P57796 275 aa9.68□□□□□ -0.86
LSAMP-203ENST00000474851 AKAP4Q5JQC9 854 aa9.68□□□□□ -0.86
LSAMP-203ENST00000474851 C1orf141Q5JVX7 400 aa9.68□□□□□ -0.86
LSAMP-203ENST00000474851 SMIM5Q71RC9 77 aa9.68□□□□□ -0.86
LSAMP-203ENST00000474851 LINC00116Q8NCU8 138 aa9.68□□□□□ -0.86
LSAMP-203ENST00000474851 NUP188Q5SRE5 1749 aa9.68□□□□□ -0.86
LSAMP-203ENST00000474851 U2SURPO15042 1029 aaKnown RBP9.67□□□□□ -0.86
LSAMP-203ENST00000474851 RNMTO43148 476 aaKnown RBP9.67□□□□□ -0.86
LSAMP-203ENST00000474851 HMGB2P26583 209 aaKnown RBP9.67□□□□□ -0.86
LSAMP-203ENST00000474851 CHRDL2Q6WN34 429 aa9.67□□□□□ -0.86
LSAMP-203ENST00000474851 PHACTR3Q96KR7 559 aa9.67□□□□□ -0.86
LSAMP-203ENST00000474851 SBF2Q86WG5 1849 aa9.67□□□□□ -0.86
LSAMP-203ENST00000474851 COL3A1P02461 1466 aaPredicted RBP9.66□□□□□ -0.86
LSAMP-203ENST00000474851 ATP6V1AP38606 617 aa9.66□□□□□ -0.86
LSAMP-203ENST00000474851 SYT17Q9BSW7 474 aa9.66□□□□□ -0.86
LSAMP-203ENST00000474851 PPP1R1BQ9UD71 204 aaPredicted RBP9.66□□□□□ -0.86
LSAMP-203ENST00000474851 RGPD3A6NKT7 1758 aaPredicted RBP9.65□□□□□ -0.86
LSAMP-203ENST00000474851 RGPD2P0DJD1 1756 aa9.65□□□□□ -0.86
LSAMP-203ENST00000474851 RGPD4Q7Z3J3 1758 aa9.65□□□□□ -0.86
LSAMP-203ENST00000474851 LRP5O75197 1615 aa9.65□□□□□ -0.86
LSAMP-203ENST00000474851 PAPPAQ13219 1627 aa9.65□□□□□ -0.86
LSAMP-203ENST00000474851 DDX10Q13206 875 aaKnown RBP9.65□□□□□ -0.86
LSAMP-203ENST00000474851 IL17REQ8NFR9 667 aa9.65□□□□□ -0.86
LSAMP-203ENST00000474851 CFAP53Q96M91 514 aa9.65□□□□□ -0.86
LSAMP-203ENST00000474851 ARXQ96QS3 562 aa9.65□□□□□ -0.86
LSAMP-203ENST00000474851 FHDC1Q9C0D6 1143 aaPredicted RBP9.65□□□□□ -0.86
LSAMP-203ENST00000474851 RSPH6AQ9H0K4 717 aa9.65□□□□□ -0.86
LSAMP-203ENST00000474851 SLC52A2Q9HAB3 445 aa9.65□□□□□ -0.86
LSAMP-203ENST00000474851 SHANK3Q9BYB0 1731 aa9.65□□□□□ -0.87
LSAMP-203ENST00000474851 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.64□□□□□ -0.87
LSAMP-203ENST00000474851 PTCD1O75127 700 aaKnown RBP9.64□□□□□ -0.87
LSAMP-203ENST00000474851 FCHSD2O94868 740 aa9.64□□□□□ -0.87
LSAMP-203ENST00000474851 RC3H1Q5TC82 1133 aaKnown RBP9.64□□□□□ -0.87
LSAMP-203ENST00000474851 FLAD1Q8NFF5 587 aa9.64□□□□□ -0.87
LSAMP-203ENST00000474851 RBM42Q9BTD8 480 aaKnown RBP9.64□□□□□ -0.87
LSAMP-203ENST00000474851 UTRNP46939 3433 aa9.64□□□□□ -0.87
LSAMP-203ENST00000474851 U2AF1L5P0DN76 240 aaPredicted RBP9.63□□□□□ -0.87
LSAMP-203ENST00000474851 SSFA2P28290 1259 aa9.63□□□□□ -0.87
LSAMP-203ENST00000474851 PRKAR2BP31323 418 aa9.63□□□□□ -0.87
LSAMP-203ENST00000474851 U2AF1Q01081 240 aaKnown RBP eCLIP9.63□□□□□ -0.87
LSAMP-203ENST00000474851 AK7Q96M32 723 aa9.63□□□□□ -0.87
LSAMP-203ENST00000474851 NUDCQ9Y266 331 aa9.63□□□□□ -0.87
LSAMP-203ENST00000474851 BTAF1O14981 1849 aa9.62□□□□□ -0.87
LSAMP-203ENST00000474851 MAP2P11137 1827 aaKnown RBP9.62□□□□□ -0.87
LSAMP-203ENST00000474851 GNAT3A8MTJ3 354 aa9.62□□□□□ -0.87
LSAMP-203ENST00000474851 GNPATO15228 680 aa9.62□□□□□ -0.87
LSAMP-203ENST00000474851 SLC39A6Q13433 755 aa9.62□□□□□ -0.87
LSAMP-203ENST00000474851 MSL1Q68DK7 614 aa9.62□□□□□ -0.87
LSAMP-203ENST00000474851 GAS2L2Q8NHY3 880 aa9.62□□□□□ -0.87
LSAMP-203ENST00000474851 PKD1L3Q7Z443 1732 aa9.62□□□□□ -0.87
LSAMP-203ENST00000474851 PHF14O94880 888 aa9.61□□□□□ -0.87
LSAMP-203ENST00000474851 POLD1P28340 1107 aa9.61□□□□□ -0.87
LSAMP-203ENST00000474851 RALBP1Q15311 655 aa9.61□□□□□ -0.87
LSAMP-203ENST00000474851 INTS5Q6P9B9 1019 aaKnown RBP9.61□□□□□ -0.87
LSAMP-203ENST00000474851 MAP3K5Q99683 1374 aa9.61□□□□□ -0.87
LSAMP-203ENST00000474851 CASZ1Q86V15 1759 aa9.6□□□□□ -0.87
LSAMP-203ENST00000474851 CNTNAP4Q9C0A0 1308 aa9.6□□□□□ -0.87
LSAMP-203ENST00000474851 RPS6KA4O75676 772 aa9.6□□□□□ -0.87
LSAMP-203ENST00000474851 TRAPPC3LQ5T215 181 aa9.6□□□□□ -0.87
LSAMP-203ENST00000474851 DNAJC10Q8IXB1 793 aa9.6□□□□□ -0.87
LSAMP-203ENST00000474851 ARHGEF1Q92888 912 aaKnown RBP9.6□□□□□ -0.87
LSAMP-203ENST00000474851 PLEKHF1Q96S99 279 aa9.6□□□□□ -0.87
LSAMP-203ENST00000474851 RTCBQ9Y3I0 505 aaKnown RBP9.6□□□□□ -0.87
LSAMP-203ENST00000474851 DOT1LQ8TEK3 1739 aa9.59□□□□□ -0.87
LSAMP-203ENST00000474851 TOGARAM1Q9Y4F4 1720 aa9.59□□□□□ -0.87
LSAMP-203ENST00000474851 CYP19A1P11511 503 aaPredicted RBP9.59□□□□□ -0.87
LSAMP-203ENST00000474851 CRKLP46109 303 aaKnown RBP9.59□□□□□ -0.87
LSAMP-203ENST00000474851 CEMIPQ8WUJ3 1361 aa9.59□□□□□ -0.87
LSAMP-203ENST00000474851 KCNQ3O43525 872 aa9.58□□□□□ -0.88
LSAMP-203ENST00000474851 ZNF790Q6PG37 636 aa9.58□□□□□ -0.88
LSAMP-203ENST00000474851 VSIG10Q8N0Z9 540 aa9.58□□□□□ -0.88
LSAMP-203ENST00000474851 NLGN2Q8NFZ4 835 aa9.58□□□□□ -0.88
LSAMP-203ENST00000474851 ZNF496Q96IT1 587 aaPredicted RBP9.58□□□□□ -0.88
LSAMP-203ENST00000474851 HTATSF1O43719 755 aaKnown RBP9.57□□□□□ -0.88
LSAMP-203ENST00000474851 GYS1P13807 737 aa9.57□□□□□ -0.88
LSAMP-203ENST00000474851 DCTN1Q14203 1278 aa9.57□□□□□ -0.88
LSAMP-203ENST00000474851 MCM10Q7L590 875 aa9.57□□□□□ -0.88
LSAMP-203ENST00000474851 CD2APQ9Y5K6 639 aa9.57□□□□□ -0.88
LSAMP-203ENST00000474851 TEFQ10587 303 aa9.56□□□□□ -0.88
LSAMP-203ENST00000474851 NLGN1Q8N2Q7 840 aa9.56□□□□□ -0.88
LSAMP-203ENST00000474851 CCDC87Q9NVE4 849 aa9.56□□□□□ -0.88
LSAMP-203ENST00000474851 GOLGB1Q14789 3259 aaKnown RBP9.56□□□□□ -0.88
LSAMP-203ENST00000474851 LY75O60449 1722 aa9.56□□□□□ -0.88
LSAMP-203ENST00000474851 MRC1P22897 1456 aa9.55□□□□□ -0.88
LSAMP-203ENST00000474851 BTBD11A6QL63 1104 aa9.55□□□□□ -0.88
LSAMP-203ENST00000474851 MMP10P09238 476 aa9.55□□□□□ -0.88
LSAMP-203ENST00000474851 RFC4P35249 363 aa9.55□□□□□ -0.88
LSAMP-203ENST00000474851 SP7Q8TDD2 431 aaPredicted RBP9.55□□□□□ -0.88
LSAMP-203ENST00000474851 PRKRIP1Q9H875 184 aaPredicted RBP9.55□□□□□ -0.88
LSAMP-203ENST00000474851 SRP68Q9UHB9 627 aaKnown RBP9.55□□□□□ -0.88
LSAMP-203ENST00000474851 ZBTB1Q9Y2K1 713 aa9.55□□□□□ -0.88
LSAMP-203ENST00000474851 SOS1Q07889 1333 aaPredicted RBP9.55□□□□□ -0.88
LSAMP-203ENST00000474851 MYBBP1AQ9BQG0 1328 aaKnown RBP9.55□□□□□ -0.88
LSAMP-203ENST00000474851 STARD3NLO95772 234 aa9.54□□□□□ -0.88
LSAMP-203ENST00000474851 TM4SF1P30408 202 aa9.54□□□□□ -0.88
LSAMP-203ENST00000474851 FKBP8Q14318 412 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms