RNA–Protein interactions for RNA: ENST00000474642.1

RTN4R-206, Transcript of reticulon 4 receptor, humanhuman

TSL 4

Gene RTN4R, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-206ENST00000474642 C9orf131Q5VYM1 1079 aa18.62■□□□□ 0.57
RTN4R-206ENST00000474642 NLGN1Q8N2Q7 840 aa18.62■□□□□ 0.57
RTN4R-206ENST00000474642 CCDC87Q9NVE4 849 aa18.62■□□□□ 0.57
RTN4R-206ENST00000474642 SPG7Q9UQ90 795 aa18.62■□□□□ 0.57
RTN4R-206ENST00000474642 MAP2P11137 1827 aaKnown RBP18.62■□□□□ 0.57
RTN4R-206ENST00000474642 KIF13BQ9NQT8 1826 aa18.62■□□□□ 0.57
RTN4R-206ENST00000474642 FLT4P35916 1363 aa18.61■□□□□ 0.57
RTN4R-206ENST00000474642 NKX1-1Q15270 411 aaPredicted RBP18.61■□□□□ 0.57
RTN4R-206ENST00000474642 TRAPPC3LQ5T215 181 aa18.61■□□□□ 0.57
RTN4R-206ENST00000474642 ASAP1Q9ULH1 1129 aa18.61■□□□□ 0.57
RTN4R-206ENST00000474642 PLEKHG2Q9H7P9 1386 aa18.6■□□□□ 0.57
RTN4R-206ENST00000474642 PRELPP51888 382 aa18.6■□□□□ 0.57
RTN4R-206ENST00000474642 RTCBQ9Y3I0 505 aaKnown RBP18.6■□□□□ 0.57
RTN4R-206ENST00000474642 KDM2BQ8NHM5 1336 aa18.59■□□□□ 0.57
RTN4R-206ENST00000474642 KIAA1551Q9HCM1 1747 aa18.59■□□□□ 0.57
RTN4R-206ENST00000474642 C10orf71Q711Q0 1435 aa18.58■□□□□ 0.57
RTN4R-206ENST00000474642 SLC24A1O60721 1099 aa18.58■□□□□ 0.56
RTN4R-206ENST00000474642 TESK2Q96S53 571 aa18.58■□□□□ 0.56
RTN4R-206ENST00000474642 PARP3Q9Y6F1 533 aa18.58■□□□□ 0.56
RTN4R-206ENST00000474642 PKD1L3Q7Z443 1732 aa18.57■□□□□ 0.56
RTN4R-206ENST00000474642 KIF24Q5T7B8 1368 aa18.57■□□□□ 0.56
RTN4R-206ENST00000474642 ST20-MTHFSA0A0A6YYL1 179 aa18.57■□□□□ 0.56
RTN4R-206ENST00000474642 RRAGCQ9HB90 399 aa18.57■□□□□ 0.56
RTN4R-206ENST00000474642 KCPQ6ZWJ8 1503 aa18.55■□□□□ 0.56
RTN4R-206ENST00000474642 RFC4P35249 363 aa18.55■□□□□ 0.56
RTN4R-206ENST00000474642 ARHGEF1Q92888 912 aaKnown RBP18.55■□□□□ 0.56
RTN4R-206ENST00000474642 ATG3Q9NT62 314 aa18.55■□□□□ 0.56
RTN4R-206ENST00000474642 RNF181Q9P0P0 153 aa18.55■□□□□ 0.56
RTN4R-206ENST00000474642 PIM2Q9P1W9 311 aa18.55■□□□□ 0.56
RTN4R-206ENST00000474642 GYS1P13807 737 aa18.54■□□□□ 0.56
RTN4R-206ENST00000474642 ADRA2BP18089 450 aa18.54■□□□□ 0.56
RTN4R-206ENST00000474642 IFNL2Q8IZJ0 200 aa18.54■□□□□ 0.56
RTN4R-206ENST00000474642 SMC1BQ8NDV3 1235 aa18.54■□□□□ 0.56
RTN4R-206ENST00000474642 PPM1GO15355 546 aaPredicted RBP18.53■□□□□ 0.56
RTN4R-206ENST00000474642 KCNA3P22001 575 aa18.53■□□□□ 0.56
RTN4R-206ENST00000474642 BRCA1P38398 1863 aaKnown RBP18.53■□□□□ 0.56
RTN4R-206ENST00000474642 DALRD3Q5D0E6 543 aaKnown RBP18.53■□□□□ 0.56
RTN4R-206ENST00000474642 RBM42Q9BTD8 480 aaKnown RBP18.53■□□□□ 0.56
RTN4R-206ENST00000474642 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.53■□□□□ 0.56
RTN4R-206ENST00000474642 EMILIN1Q9Y6C2 1016 aa18.53■□□□□ 0.56
RTN4R-206ENST00000474642 ARFGEF1Q9Y6D6 1849 aa18.53■□□□□ 0.56
RTN4R-206ENST00000474642 C4AP0C0L4 1744 aa18.52■□□□□ 0.56
RTN4R-206ENST00000474642 PHKG2P15735 406 aa18.52■□□□□ 0.56
RTN4R-206ENST00000474642 RC3H1Q5TC82 1133 aaKnown RBP18.52■□□□□ 0.56
RTN4R-206ENST00000474642 DCAF5Q96JK2 942 aa18.52■□□□□ 0.56
RTN4R-206ENST00000474642 RPS6KA4O75676 772 aa18.5■□□□□ 0.55
RTN4R-206ENST00000474642 PCNTO95613 3336 aa18.49■□□□□ 0.55
RTN4R-206ENST00000474642 NCAPD2Q15021 1401 aa18.49■□□□□ 0.55
RTN4R-206ENST00000474642 KIF20BQ96Q89 1820 aa18.49■□□□□ 0.55
RTN4R-206ENST00000474642 HSPA1AP0DMV8 641 aaKnown RBP18.49■□□□□ 0.55
RTN4R-206ENST00000474642 HSPA1BP0DMV9 641 aaKnown RBP18.49■□□□□ 0.55
RTN4R-206ENST00000474642 EYA1Q99502 592 aa18.49■□□□□ 0.55
RTN4R-206ENST00000474642 TONSLQ96HA7 1378 aa18.49■□□□□ 0.55
RTN4R-206ENST00000474642 KDRP35968 1356 aa18.48■□□□□ 0.55
RTN4R-206ENST00000474642 SLC4A9Q96Q91 983 aa18.48■□□□□ 0.55
RTN4R-206ENST00000474642 CNTNAP4Q9C0A0 1308 aa18.48■□□□□ 0.55
RTN4R-206ENST00000474642 TNRC6CQ9HCJ0 1690 aaKnown RBP18.47■□□□□ 0.55
RTN4R-206ENST00000474642 SBF1O95248 1867 aa18.46■□□□□ 0.54
RTN4R-206ENST00000474642 ERVV-2B6SEH9 535 aa18.45■□□□□ 0.54
RTN4R-206ENST00000474642 CHRNA5P30532 468 aa18.45■□□□□ 0.54
RTN4R-206ENST00000474642 WASHC2AQ641Q2 1341 aa18.45■□□□□ 0.54
RTN4R-206ENST00000474642 MYH14Q7Z406 1995 aaKnown RBP18.43■□□□□ 0.54
RTN4R-206ENST00000474642 VEGFAP15692 232 aaPredicted RBP18.43■□□□□ 0.54
RTN4R-206ENST00000474642 FKBP8Q14318 412 aa18.43■□□□□ 0.54
RTN4R-206ENST00000474642 SRP68Q9UHB9 627 aaKnown RBP18.43■□□□□ 0.54
RTN4R-206ENST00000474642 ZNF831Q5JPB2 1677 aa18.42■□□□□ 0.54
RTN4R-206ENST00000474642 HSP90AB1P08238 724 aaKnown RBP18.42■□□□□ 0.54
RTN4R-206ENST00000474642 RASSF7Q02833 373 aa18.42■□□□□ 0.54
RTN4R-206ENST00000474642 DDR1Q08345 913 aa18.42■□□□□ 0.54
RTN4R-206ENST00000474642 COL5A3P25940 1745 aaPredicted RBP18.42■□□□□ 0.54
RTN4R-206ENST00000474642 ZC3H4Q9UPT8 1303 aaKnown RBP18.42■□□□□ 0.54
RTN4R-206ENST00000474642 GLTPD2A6NH11 291 aa18.41■□□□□ 0.54
RTN4R-206ENST00000474642 CABP4P57796 275 aa18.41■□□□□ 0.54
RTN4R-206ENST00000474642 CDCA8Q53HL2 280 aa18.41■□□□□ 0.54
RTN4R-206ENST00000474642 PTCD1O75127 700 aaKnown RBP18.4■□□□□ 0.54
RTN4R-206ENST00000474642 CRKLP46109 303 aaKnown RBP18.4■□□□□ 0.54
RTN4R-206ENST00000474642 CARD14Q9BXL6 1004 aa18.4■□□□□ 0.54
RTN4R-206ENST00000474642 USP42Q9H9J4 1324 aaKnown RBP18.4■□□□□ 0.54
RTN4R-206ENST00000474642 LMNB1P20700 586 aa18.39■□□□□ 0.53
RTN4R-206ENST00000474642 POLRMTO00411 1230 aaKnown RBP18.38■□□□□ 0.53
RTN4R-206ENST00000474642 EIF4A2Q14240 407 aaKnown RBP18.37■□□□□ 0.53
RTN4R-206ENST00000474642 PLEKHO1Q53GL0 409 aaPredicted RBP18.37■□□□□ 0.53
RTN4R-206ENST00000474642 POLKQ9UBT6 870 aa18.37■□□□□ 0.53
RTN4R-206ENST00000474642 ANKRD26Q9UPS8 1709 aa18.37■□□□□ 0.53
RTN4R-206ENST00000474642 ZPR1O75312 459 aa18.36■□□□□ 0.53
RTN4R-206ENST00000474642 TM4SF1P30408 202 aa18.36■□□□□ 0.53
RTN4R-206ENST00000474642 ZNF530Q6P9A1 599 aaPredicted RBP18.36■□□□□ 0.53
RTN4R-206ENST00000474642 KDM6AO15550 1401 aaPredicted RBP18.35■□□□□ 0.53
RTN4R-206ENST00000474642 MTHFSP49914 203 aa18.33■□□□□ 0.52
RTN4R-206ENST00000474642 USPL1Q5W0Q7 1092 aa18.33■□□□□ 0.52
RTN4R-206ENST00000474642 DPY19L2Q6NUT2 758 aa18.33■□□□□ 0.52
RTN4R-206ENST00000474642 TTLL6Q8N841 843 aa18.33■□□□□ 0.52
RTN4R-206ENST00000474642 CCDC88AQ3V6T2 1871 aa18.33■□□□□ 0.52
RTN4R-206ENST00000474642 TNNT2P45379 298 aaPredicted RBP18.32■□□□□ 0.52
RTN4R-206ENST00000474642 AMOTQ4VCS5 1084 aa18.32■□□□□ 0.52
RTN4R-206ENST00000474642 C1orf141Q5JVX7 400 aa18.32■□□□□ 0.52
RTN4R-206ENST00000474642 NFATC2IPQ8NCF5 419 aa18.32■□□□□ 0.52
RTN4R-206ENST00000474642 MKRN1Q9UHC7 482 aaKnown RBP18.32■□□□□ 0.52
RTN4R-206ENST00000474642 INTS5Q6P9B9 1019 aaKnown RBP18.31■□□□□ 0.52
RTN4R-206ENST00000474642 CREBZFQ9NS37 354 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 1600.9 ms