RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 CDK5RAP3Q96JB5 506 aa5.51□□□□□ -1.53
CCNL1-215ENST00000474539 ANO2Q9NQ90 1003 aa5.51□□□□□ -1.53
CCNL1-215ENST00000474539 BMP2KQ9NSY1 1161 aaPredicted RBP5.51□□□□□ -1.53
CCNL1-215ENST00000474539 BLMP54132 1417 aaPredicted RBP5.51□□□□□ -1.53
CCNL1-215ENST00000474539 NCKAP5LQ9HCH0 1330 aa5.51□□□□□ -1.53
CCNL1-215ENST00000474539 KIF20AO95235 890 aa5.51□□□□□ -1.53
CCNL1-215ENST00000474539 GLIPR1L2Q4G1C9 344 aa5.51□□□□□ -1.53
CCNL1-215ENST00000474539 ZSCAN29Q8IWY8 852 aaPredicted RBP5.51□□□□□ -1.53
CCNL1-215ENST00000474539 GOLGA6L1Q8N7Z2 621 aa5.51□□□□□ -1.53
CCNL1-215ENST00000474539 PYM1Q9BRP8 204 aaKnown RBP5.51□□□□□ -1.53
CCNL1-215ENST00000474539 SLAIN2Q9P270 581 aa5.51□□□□□ -1.53
CCNL1-215ENST00000474539 CDC45O75419 566 aa5.51□□□□□ -1.53
CCNL1-215ENST00000474539 HOXB7P09629 217 aa5.51□□□□□ -1.53
CCNL1-215ENST00000474539 NBPF6Q5VWK0 638 aa5.51□□□□□ -1.53
CCNL1-215ENST00000474539 NBPF5PQ86XG9 351 aaPredicted RBP5.51□□□□□ -1.53
CCNL1-215ENST00000474539 NBPF4Q96M43 638 aa5.51□□□□□ -1.53
CCNL1-215ENST00000474539 SAMD9Q5K651 1589 aa5.51□□□□□ -1.53
CCNL1-215ENST00000474539 HECW2Q9P2P5 1572 aa5.51□□□□□ -1.53
CCNL1-215ENST00000474539 ABCC1P33527 1531 aa5.51□□□□□ -1.53
CCNL1-215ENST00000474539 EIF6P56537 245 aaKnown RBP5.5□□□□□ -1.53
CCNL1-215ENST00000474539 TMEM132AQ24JP5 1023 aa5.5□□□□□ -1.53
CCNL1-215ENST00000474539 CC2D2BQ6DHV5 1058 aa5.5□□□□□ -1.53
CCNL1-215ENST00000474539 DZIP1Q86YF9 867 aaKnown RBP5.5□□□□□ -1.53
CCNL1-215ENST00000474539 DRC7Q8IY82 874 aa5.5□□□□□ -1.53
CCNL1-215ENST00000474539 CWC25Q9NXE8 425 aaPredicted RBP5.5□□□□□ -1.53
CCNL1-215ENST00000474539 ANKIB1Q9P2G1 1089 aa5.5□□□□□ -1.53
CCNL1-215ENST00000474539 ZRANB1Q9UGI0 708 aa5.5□□□□□ -1.53
CCNL1-215ENST00000474539 USP21Q9UK80 565 aa5.5□□□□□ -1.53
CCNL1-215ENST00000474539 EFCAB6Q5THR3 1501 aa5.5□□□□□ -1.53
CCNL1-215ENST00000474539 DDX11L8A8MPP1 907 aa5.5□□□□□ -1.53
CCNL1-215ENST00000474539 PAXIP1Q6ZW49 1069 aaPredicted RBP5.5□□□□□ -1.53
CCNL1-215ENST00000474539 RAB34Q9BZG1 259 aa5.5□□□□□ -1.53
CCNL1-215ENST00000474539 SURF6O75683 361 aaKnown RBP5.5□□□□□ -1.53
CCNL1-215ENST00000474539 ALDH1L1O75891 902 aa5.5□□□□□ -1.53
CCNL1-215ENST00000474539 HMGB1P09429 215 aaKnown RBP5.5□□□□□ -1.53
CCNL1-215ENST00000474539 ALDH1B1P30837 517 aa5.5□□□□□ -1.53
CCNL1-215ENST00000474539 METTL24Q5JXM2 366 aa5.5□□□□□ -1.53
CCNL1-215ENST00000474539 TRAPPC3LQ5T215 181 aa5.5□□□□□ -1.53
CCNL1-215ENST00000474539 NOC3LQ8WTT2 800 aaKnown RBP5.5□□□□□ -1.53
CCNL1-215ENST00000474539 ZNF396Q96N95 335 aaPredicted RBP5.5□□□□□ -1.53
CCNL1-215ENST00000474539 SLC12A5Q9H2X9 1139 aa5.5□□□□□ -1.53
CCNL1-215ENST00000474539 LUC7LQ9NQ29 371 aaKnown RBP5.5□□□□□ -1.53
CCNL1-215ENST00000474539 TRMT112Q9UI30 125 aaKnown RBP5.5□□□□□ -1.53
CCNL1-215ENST00000474539 U3KPZ7 1027 aaPredicted RBP5.5□□□□□ -1.53
CCNL1-215ENST00000474539 YTHDC2Q9H6S0 1430 aaKnown RBP5.5□□□□□ -1.53
CCNL1-215ENST00000474539 PLXNC1O60486 1568 aa5.5□□□□□ -1.53
CCNL1-215ENST00000474539 GTPBP4Q9BZE4 634 aaKnown RBP5.5□□□□□ -1.53
CCNL1-215ENST00000474539 TFCP2L1Q9NZI6 479 aa5.5□□□□□ -1.53
CCNL1-215ENST00000474539 LRP2BPQ9P2M1 347 aa5.5□□□□□ -1.53
CCNL1-215ENST00000474539 DACH1Q9UI36 760 aa5.5□□□□□ -1.53
CCNL1-215ENST00000474539 ERBB4Q15303 1308 aa5.49□□□□□ -1.53
CCNL1-215ENST00000474539 DPY19L2Q6NUT2 758 aa5.49□□□□□ -1.53
CCNL1-215ENST00000474539 CHMP5Q9NZZ3 219 aa5.49□□□□□ -1.53
CCNL1-215ENST00000474539 RAI14Q9P0K7 980 aa5.49□□□□□ -1.53
CCNL1-215ENST00000474539 MYO6Q9UM54 1294 aa5.49□□□□□ -1.53
CCNL1-215ENST00000474539 CEP131Q9UPN4 1083 aa5.49□□□□□ -1.53
CCNL1-215ENST00000474539 EDC4Q6P2E9 1401 aaKnown RBP5.49□□□□□ -1.53
CCNL1-215ENST00000474539 ZFYP08048 801 aaPredicted RBP5.49□□□□□ -1.53
CCNL1-215ENST00000474539 NUCB2P80303 420 aa5.49□□□□□ -1.53
CCNL1-215ENST00000474539 BRDTQ58F21 947 aaPredicted RBP5.49□□□□□ -1.53
CCNL1-215ENST00000474539 OTUD7BQ6GQQ9 843 aa5.49□□□□□ -1.53
CCNL1-215ENST00000474539 AEBP1Q8IUX7 1158 aa5.49□□□□□ -1.53
CCNL1-215ENST00000474539 IP6K1Q92551 441 aa5.49□□□□□ -1.53
CCNL1-215ENST00000474539 NAP1L4Q99733 375 aaKnown RBP5.49□□□□□ -1.53
CCNL1-215ENST00000474539 UBAC1Q9BSL1 405 aa5.49□□□□□ -1.53
CCNL1-215ENST00000474539 SLC5A4Q9NY91 659 aa5.49□□□□□ -1.53
CCNL1-215ENST00000474539 DNMT1P26358 1616 aaKnown RBP5.49□□□□□ -1.53
CCNL1-215ENST00000474539 CCDC69A6NI79 296 aa5.49□□□□□ -1.53
CCNL1-215ENST00000474539 MSNP26038 577 aaKnown RBP5.49□□□□□ -1.53
CCNL1-215ENST00000474539 STIM1Q13586 685 aa5.49□□□□□ -1.53
CCNL1-215ENST00000474539 DNTTIP2Q5QJE6 756 aaKnown RBP5.49□□□□□ -1.53
CCNL1-215ENST00000474539 ANKRD18AQ8IVF6 992 aa5.49□□□□□ -1.53
CCNL1-215ENST00000474539 KIF1BPQ96EK5 621 aa5.49□□□□□ -1.53
CCNL1-215ENST00000474539 ZSCAN31Q96LW9 406 aaPredicted RBP5.49□□□□□ -1.53
CCNL1-215ENST00000474539 C22orf23Q9BZE7 217 aa5.49□□□□□ -1.53
CCNL1-215ENST00000474539 LRRC27Q9C0I9 530 aa5.49□□□□□ -1.53
CCNL1-215ENST00000474539 SPATA31A6Q5VVP1 1343 aa5.49□□□□□ -1.53
CCNL1-215ENST00000474539 USP5P45974 858 aa5.48□□□□□ -1.53
CCNL1-215ENST00000474539 TMEM87AQ8NBN3 555 aa5.48□□□□□ -1.53
CCNL1-215ENST00000474539 NAT10Q9H0A0 1025 aaKnown RBP5.48□□□□□ -1.53
CCNL1-215ENST00000474539 SEC63Q9UGP8 760 aaKnown RBP5.48□□□□□ -1.53
CCNL1-215ENST00000474539 ANKARQ7Z5J8 1434 aa5.48□□□□□ -1.53
CCNL1-215ENST00000474539 A0A0U1RQG5 324 aaPredicted RBP5.48□□□□□ -1.53
CCNL1-215ENST00000474539 LETM1O95202 739 aaPredicted RBP5.48□□□□□ -1.53
CCNL1-215ENST00000474539 SLC4A2P04920 1241 aa5.48□□□□□ -1.53
CCNL1-215ENST00000474539 NT5C2P49902 561 aa5.48□□□□□ -1.53
CCNL1-215ENST00000474539 PABPC4Q13310 644 aaKnown RBP eCLIP5.48□□□□□ -1.53
CCNL1-215ENST00000474539 ODF2Q5BJF6 829 aa5.48□□□□□ -1.53
CCNL1-215ENST00000474539 MPRIPQ6WCQ1 1025 aa5.48□□□□□ -1.53
CCNL1-215ENST00000474539 UTP14AQ9BVJ6 771 aaKnown RBP5.48□□□□□ -1.53
CCNL1-215ENST00000474539 PRM3Q9NNZ6 103 aa5.48□□□□□ -1.53
CCNL1-215ENST00000474539 A2ML1A8K2U0 1454 aa5.48□□□□□ -1.53
CCNL1-215ENST00000474539 ARHGAP31Q2M1Z3 1444 aa5.48□□□□□ -1.53
CCNL1-215ENST00000474539 SMC2O95347 1197 aa5.48□□□□□ -1.53
CCNL1-215ENST00000474539 POLR3DP05423 398 aaPredicted RBP5.48□□□□□ -1.53
CCNL1-215ENST00000474539 ATP6V1AP38606 617 aa5.48□□□□□ -1.53
CCNL1-215ENST00000474539 GNAQP50148 359 aa5.48□□□□□ -1.53
CCNL1-215ENST00000474539 RRP1P56182 461 aaKnown RBP5.48□□□□□ -1.53
CCNL1-215ENST00000474539 TMED8Q6PL24 325 aaPredicted RBP5.48□□□□□ -1.53
CCNL1-215ENST00000474539 CCDC73Q6ZRK6 1079 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 500 ms