RNA–Protein interactions for RNA: ENST00000473783.5

SSBP1-209, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-209ENST00000473783 AMPHP49418 695 aa15.05■□□□□ -0
SSBP1-209ENST00000473783 SIK1P57059 783 aa15.05■□□□□ -0
SSBP1-209ENST00000473783 VEGFAP15692 232 aaPredicted RBP15.04■□□□□ -0
SSBP1-209ENST00000473783 TMF1P82094 1093 aa15.04■□□□□ -0
SSBP1-209ENST00000473783 NBPF6Q5VWK0 638 aa15.04■□□□□ -0
SSBP1-209ENST00000473783 NBPF4Q96M43 638 aa15.04■□□□□ -0
SSBP1-209ENST00000473783 PIM2Q9P1W9 311 aa15.04■□□□□ -0
SSBP1-209ENST00000473783 SMG6Q86US8 1419 aaKnown RBP15.03■□□□□ -0
SSBP1-209ENST00000473783 KCNA3P22001 575 aa15.03■□□□□ -0
SSBP1-209ENST00000473783 PIGBQ92521 554 aa15.03■□□□□ -0
SSBP1-209ENST00000473783 TERF2IPQ9NYB0 399 aa15.03■□□□□ -0
SSBP1-209ENST00000473783 A0A1W2PP64 1363 aa15.02■□□□□ -0
SSBP1-209ENST00000473783 CYP27B1O15528 508 aa15.02■□□□□ -0
SSBP1-209ENST00000473783 FAM161AQ3B820 660 aa15.02■□□□□ -0
SSBP1-209ENST00000473783 DALRD3Q5D0E6 543 aaKnown RBP15.02■□□□□ -0
SSBP1-209ENST00000473783 TMC1Q8TDI8 760 aa15.02■□□□□ -0
SSBP1-209ENST00000473783 ROCK2O75116 1388 aaKnown RBP15.01□□□□□ -0.01
SSBP1-209ENST00000473783 FOXN1O15353 648 aa15.01□□□□□ -0.01
SSBP1-209ENST00000473783 USHBP1Q8N6Y0 703 aa15.01□□□□□ -0.01
SSBP1-209ENST00000473783 PARP3Q9Y6F1 533 aa15.01□□□□□ -0.01
SSBP1-209ENST00000473783 KDM6AO15550 1401 aaPredicted RBP15□□□□□ -0.01
SSBP1-209ENST00000473783 ITPK1Q13572 414 aa15□□□□□ -0.01
SSBP1-209ENST00000473783 COG3Q96JB2 828 aa15□□□□□ -0.01
SSBP1-209ENST00000473783 TIAM2Q8IVF5 1701 aa15□□□□□ -0.01
SSBP1-209ENST00000473783 ZNF831Q5JPB2 1677 aa15□□□□□ -0.01
SSBP1-209ENST00000473783 CCDC88AQ3V6T2 1871 aa14.99□□□□□ -0.01
SSBP1-209ENST00000473783 GLTPD2A6NH11 291 aa14.99□□□□□ -0.01
SSBP1-209ENST00000473783 ATP6V1AP38606 617 aa14.99□□□□□ -0.01
SSBP1-209ENST00000473783 TRAPPC3LQ5T215 181 aa14.99□□□□□ -0.01
SSBP1-209ENST00000473783 SLC12A5Q9H2X9 1139 aa14.99□□□□□ -0.01
SSBP1-209ENST00000473783 CREBZFQ9NS37 354 aa14.99□□□□□ -0.01
SSBP1-209ENST00000473783 RTCBQ9Y3I0 505 aaKnown RBP14.99□□□□□ -0.01
SSBP1-209ENST00000473783 CTCFP49711 727 aaPredicted RBP14.98□□□□□ -0.01
SSBP1-209ENST00000473783 COL5A3P25940 1745 aaPredicted RBP14.97□□□□□ -0.01
SSBP1-209ENST00000473783 GYS1P13807 737 aa14.97□□□□□ -0.01
SSBP1-209ENST00000473783 NKX1-1Q15270 411 aaPredicted RBP14.97□□□□□ -0.01
SSBP1-209ENST00000473783 MKRN1Q9UHC7 482 aaKnown RBP14.97□□□□□ -0.01
SSBP1-209ENST00000473783 ARHGEF1Q92888 912 aaKnown RBP14.96□□□□□ -0.01
SSBP1-209ENST00000473783 AIDAQ96BJ3 306 aa14.96□□□□□ -0.01
SSBP1-209ENST00000473783 TMOD3Q9NYL9 352 aa14.96□□□□□ -0.01
SSBP1-209ENST00000473783 LMNB1P20700 586 aa14.95□□□□□ -0.02
SSBP1-209ENST00000473783 FBLN1P23142 703 aa14.95□□□□□ -0.02
SSBP1-209ENST00000473783 ABHD8Q96I13 439 aa14.95□□□□□ -0.02
SSBP1-209ENST00000473783 ASAP1Q9ULH1 1129 aa14.95□□□□□ -0.02
SSBP1-209ENST00000473783 PDE4DIPQ5VU43 2346 aa14.95□□□□□ -0.02
SSBP1-209ENST00000473783 KDRP35968 1356 aa14.95□□□□□ -0.02
SSBP1-209ENST00000473783 VIRMAQ69YN4 1812 aaKnown RBP14.94□□□□□ -0.02
SSBP1-209ENST00000473783 RFC4P35249 363 aa14.94□□□□□ -0.02
SSBP1-209ENST00000473783 MLLT1Q03111 559 aaPredicted RBP14.94□□□□□ -0.02
SSBP1-209ENST00000473783 MYH14Q7Z406 1995 aaKnown RBP14.94□□□□□ -0.02
SSBP1-209ENST00000473783 INSRP06213 1382 aa14.94□□□□□ -0.02
SSBP1-209ENST00000473783 CNTNAP1P78357 1384 aa14.94□□□□□ -0.02
SSBP1-209ENST00000473783 RASSF7Q02833 373 aa14.93□□□□□ -0.02
SSBP1-209ENST00000473783 RRS1Q15050 365 aaKnown RBP14.93□□□□□ -0.02
SSBP1-209ENST00000473783 RC3H1Q5TC82 1133 aaKnown RBP14.93□□□□□ -0.02
SSBP1-209ENST00000473783 L3MBTL2Q969R5 705 aa14.93□□□□□ -0.02
SSBP1-209ENST00000473783 PUS7Q96PZ0 661 aaKnown RBP14.93□□□□□ -0.02
SSBP1-209ENST00000473783 DLEC1Q9Y238 1755 aa14.93□□□□□ -0.02
SSBP1-209ENST00000473783 CNTNAP4Q9C0A0 1308 aa14.92□□□□□ -0.02
SSBP1-209ENST00000473783 PIAS4Q8N2W9 510 aaPredicted RBP14.92□□□□□ -0.02
SSBP1-209ENST00000473783 DICER1Q9UPY3 1922 aaKnown RBP14.92□□□□□ -0.02
SSBP1-209ENST00000473783 KIF24Q5T7B8 1368 aa14.91□□□□□ -0.02
SSBP1-209ENST00000473783 POTECB2RU33 542 aa14.91□□□□□ -0.02
SSBP1-209ENST00000473783 RPS6KA4O75676 772 aa14.91□□□□□ -0.02
SSBP1-209ENST00000473783 CHRNA5P30532 468 aa14.91□□□□□ -0.02
SSBP1-209ENST00000473783 RGS19P49795 217 aa14.91□□□□□ -0.02
SSBP1-209ENST00000473783 SPG7Q9UQ90 795 aa14.91□□□□□ -0.02
SSBP1-209ENST00000473783 NCAPD2Q15021 1401 aa14.91□□□□□ -0.02
SSBP1-209ENST00000473783 FLT4P35916 1363 aa14.9□□□□□ -0.02
SSBP1-209ENST00000473783 LBX1P52954 281 aa14.9□□□□□ -0.02
SSBP1-209ENST00000473783 CHADLQ6NUI6 762 aa14.9□□□□□ -0.02
SSBP1-209ENST00000473783 ATG3Q9NT62 314 aa14.9□□□□□ -0.02
SSBP1-209ENST00000473783 DPY19L2Q6NUT2 758 aa14.89□□□□□ -0.03
SSBP1-209ENST00000473783 WBP1LQ9NX94 342 aa14.89□□□□□ -0.03
SSBP1-209ENST00000473783 DDR1Q08345 913 aa14.88□□□□□ -0.03
SSBP1-209ENST00000473783 HSP90AB2PQ58FF8 381 aa14.88□□□□□ -0.03
SSBP1-209ENST00000473783 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.88□□□□□ -0.03
SSBP1-209ENST00000473783 SLC4A9Q96Q91 983 aa14.87□□□□□ -0.03
SSBP1-209ENST00000473783 AFDNP55196 1824 aaKnown RBP14.87□□□□□ -0.03
SSBP1-209ENST00000473783 VEGFBP49765 207 aa14.86□□□□□ -0.03
SSBP1-209ENST00000473783 USP42Q9H9J4 1324 aaKnown RBP14.86□□□□□ -0.03
SSBP1-209ENST00000473783 HSPA8P11142 646 aaKnown RBP14.85□□□□□ -0.03
SSBP1-209ENST00000473783 FKBP8Q14318 412 aa14.85□□□□□ -0.03
SSBP1-209ENST00000473783 IFNL2Q8IZJ0 200 aa14.85□□□□□ -0.03
SSBP1-209ENST00000473783 RBM42Q9BTD8 480 aaKnown RBP14.85□□□□□ -0.03
SSBP1-209ENST00000473783 NRXN2Q9P2S2 1712 aa14.84□□□□□ -0.03
SSBP1-209ENST00000473783 POLRMTO00411 1230 aaKnown RBP14.84□□□□□ -0.03
SSBP1-209ENST00000473783 PHKG2P15735 406 aa14.84□□□□□ -0.03
SSBP1-209ENST00000473783 KIF20BQ96Q89 1820 aa14.84□□□□□ -0.03
SSBP1-209ENST00000473783 PASKQ96RG2 1323 aa14.84□□□□□ -0.03
SSBP1-209ENST00000473783 TONSLQ96HA7 1378 aa14.84□□□□□ -0.03
SSBP1-209ENST00000473783 SCN4AP35499 1836 aa14.83□□□□□ -0.04
SSBP1-209ENST00000473783 FER1L6Q2WGJ9 1857 aa14.83□□□□□ -0.04
SSBP1-209ENST00000473783 CCDC85CA6NKD9 419 aa14.83□□□□□ -0.04
SSBP1-209ENST00000473783 NFKBIEO00221 500 aa14.83□□□□□ -0.04
SSBP1-209ENST00000473783 SRP68Q9UHB9 627 aaKnown RBP14.83□□□□□ -0.04
SSBP1-209ENST00000473783 ADAMTS7Q9UKP4 1686 aa14.83□□□□□ -0.04
SSBP1-209ENST00000473783 TMEM88BA6NKF7 163 aa14.82□□□□□ -0.04
SSBP1-209ENST00000473783 FYB1O15117 783 aa14.82□□□□□ -0.04
SSBP1-209ENST00000473783 TTLL6Q8N841 843 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms