RNA–Protein interactions for RNA: ENST00000473295.2

SCN1A-205, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 4

Gene SCN1A, Length 544 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-205ENST00000473295 NSFL1CQ9UNZ2 370 aaKnown RBP7.13□□□□□ -1.27
SCN1A-205ENST00000473295 ADAMTS8Q9UP79 889 aa7.13□□□□□ -1.27
SCN1A-205ENST00000473295 GAS6Q14393 721 aa7.12□□□□□ -1.27
SCN1A-205ENST00000473295 RHBDD1Q8TEB9 315 aa7.12□□□□□ -1.27
SCN1A-205ENST00000473295 FHDC1Q9C0D6 1143 aaPredicted RBP7.12□□□□□ -1.27
SCN1A-205ENST00000473295 ETNK1Q9HBU6 452 aa7.12□□□□□ -1.27
SCN1A-205ENST00000473295 ENAMQ9NRM1 1142 aa7.12□□□□□ -1.27
SCN1A-205ENST00000473295 CSB-PGBD3P0DP91 1061 aa7.11□□□□□ -1.27
SCN1A-205ENST00000473295 TLR1Q15399 786 aa7.11□□□□□ -1.27
SCN1A-205ENST00000473295 TSGA10IPQ3SY00 556 aa7.11□□□□□ -1.27
SCN1A-205ENST00000473295 PPARGC1BQ86YN6 1023 aaKnown RBP7.11□□□□□ -1.27
SCN1A-205ENST00000473295 PGBD3Q8N328 593 aa7.11□□□□□ -1.27
SCN1A-205ENST00000473295 GTPBP3Q969Y2 492 aaKnown RBP7.11□□□□□ -1.27
SCN1A-205ENST00000473295 PHF24Q9UPV7 400 aa7.11□□□□□ -1.27
SCN1A-205ENST00000473295 CFHR5Q9BXR6 569 aa7.1□□□□□ -1.27
SCN1A-205ENST00000473295 IGF1RP08069 1367 aa7.09□□□□□ -1.27
SCN1A-205ENST00000473295 GPR25O00155 361 aa7.09□□□□□ -1.27
SCN1A-205ENST00000473295 ARHGEF15O94989 841 aa7.09□□□□□ -1.27
SCN1A-205ENST00000473295 INHAP05111 366 aa7.09□□□□□ -1.27
SCN1A-205ENST00000473295 UBTFP17480 764 aaKnown RBP7.09□□□□□ -1.27
SCN1A-205ENST00000473295 MX2P20592 715 aa7.09□□□□□ -1.27
SCN1A-205ENST00000473295 PHKA2P46019 1235 aa7.09□□□□□ -1.27
SCN1A-205ENST00000473295 GDF10P55107 478 aa7.09□□□□□ -1.27
SCN1A-205ENST00000473295 MARSP56192 900 aaKnown RBP7.09□□□□□ -1.27
SCN1A-205ENST00000473295 EML3Q32P44 896 aa7.09□□□□□ -1.27
SCN1A-205ENST00000473295 C4orf17Q53FE4 359 aa7.09□□□□□ -1.27
SCN1A-205ENST00000473295 EFHC2Q5JST6 749 aa7.09□□□□□ -1.27
SCN1A-205ENST00000473295 NFATC2IPQ8NCF5 419 aa7.09□□□□□ -1.27
SCN1A-205ENST00000473295 SCARF2Q96GP6 870 aaPredicted RBP7.09□□□□□ -1.27
SCN1A-205ENST00000473295 LYPD4Q6UWN0 246 aa7.08□□□□□ -1.28
SCN1A-205ENST00000473295 C1orf216Q8TAB5 229 aa7.08□□□□□ -1.28
SCN1A-205ENST00000473295 WHAMMQ8TF30 809 aa7.08□□□□□ -1.28
SCN1A-205ENST00000473295 LRRC4BQ9NT99 713 aa7.08□□□□□ -1.28
SCN1A-205ENST00000473295 CELA2BP08218 269 aaPredicted RBP7.07□□□□□ -1.28
SCN1A-205ENST00000473295 SKIP12755 728 aa7.07□□□□□ -1.28
SCN1A-205ENST00000473295 MAP2K3P46734 347 aa7.07□□□□□ -1.28
SCN1A-205ENST00000473295 SCNN1DP51172 638 aa7.07□□□□□ -1.28
SCN1A-205ENST00000473295 NIFKQ9BYG3 293 aaKnown RBP7.07□□□□□ -1.28
SCN1A-205ENST00000473295 ALG2Q9H553 416 aa7.07□□□□□ -1.28
SCN1A-205ENST00000473295 GPAMQ9HCL2 828 aa7.07□□□□□ -1.28
SCN1A-205ENST00000473295 NOD1Q9Y239 953 aa7.07□□□□□ -1.28
SCN1A-205ENST00000473295 BACH1O14867 736 aa7.06□□□□□ -1.28
SCN1A-205ENST00000473295 SMTNP53814 917 aa7.06□□□□□ -1.28
SCN1A-205ENST00000473295 KANK3Q6NY19 840 aa7.06□□□□□ -1.28
SCN1A-205ENST00000473295 TBC1D9Q6ZT07 1266 aa7.06□□□□□ -1.28
SCN1A-205ENST00000473295 BCRP11274 1271 aa7.05□□□□□ -1.28
SCN1A-205ENST00000473295 MSX1P28360 303 aa7.05□□□□□ -1.28
SCN1A-205ENST00000473295 TMEM132AQ24JP5 1023 aa7.05□□□□□ -1.28
SCN1A-205ENST00000473295 FIGNL1Q6PIW4 674 aa7.05□□□□□ -1.28
SCN1A-205ENST00000473295 TMEM151AQ8N4L1 468 aa7.05□□□□□ -1.28
SCN1A-205ENST00000473295 SLC4A9Q96Q91 983 aa7.05□□□□□ -1.28
SCN1A-205ENST00000473295 CRISPLD1Q9H336 500 aa7.05□□□□□ -1.28
SCN1A-205ENST00000473295 PLA2G4AP47712 749 aa7.04□□□□□ -1.28
SCN1A-205ENST00000473295 RASSF7Q02833 373 aa7.04□□□□□ -1.28
SCN1A-205ENST00000473295 MTFR1Q15390 333 aa7.04□□□□□ -1.28
SCN1A-205ENST00000473295 NBPF1Q3BBV0 1214 aa7.04□□□□□ -1.28
SCN1A-205ENST00000473295 POM121Q96HA1 1249 aa7.04□□□□□ -1.28
SCN1A-205ENST00000473295 ATXN7L1Q9ULK2 861 aaPredicted RBP7.04□□□□□ -1.28
SCN1A-205ENST00000473295 A6NJY4 79 aa7.03□□□□□ -1.28
SCN1A-205ENST00000473295 PHF20L1A8MW92 1017 aa7.03□□□□□ -1.28
SCN1A-205ENST00000473295 TMEM229AB2RXF0 380 aa7.03□□□□□ -1.28
SCN1A-205ENST00000473295 PIK3CDO00329 1044 aa7.03□□□□□ -1.28
SCN1A-205ENST00000473295 CDK2AP1O14519 115 aa7.03□□□□□ -1.28
SCN1A-205ENST00000473295 GDF11O95390 407 aa7.03□□□□□ -1.28
SCN1A-205ENST00000473295 STAU1O95793 577 aaKnown RBP7.03□□□□□ -1.28
SCN1A-205ENST00000473295 GTF2IP78347 998 aa7.03□□□□□ -1.28
SCN1A-205ENST00000473295 PODNQ7Z5L7 613 aa7.03□□□□□ -1.28
SCN1A-205ENST00000473295 TRIM50Q86XT4 487 aa7.03□□□□□ -1.28
SCN1A-205ENST00000473295 RUBCNLQ9H714 662 aa7.03□□□□□ -1.28
SCN1A-205ENST00000473295 GDF2Q9UK05 429 aaPredicted RBP7.03□□□□□ -1.28
SCN1A-205ENST00000473295 PCDHGA11Q9Y5H2 935 aa7.03□□□□□ -1.28
SCN1A-205ENST00000473295 PSME1Q06323 249 aa7.02□□□□□ -1.29
SCN1A-205ENST00000473295 NCOA4Q13772 614 aa7.02□□□□□ -1.29
SCN1A-205ENST00000473295 NLRP8Q86W28 1048 aa7.02□□□□□ -1.29
SCN1A-205ENST00000473295 NEDD1Q8NHV4 660 aa7.02□□□□□ -1.29
SCN1A-205ENST00000473295 ACDQ96AP0 544 aa7.02□□□□□ -1.29
SCN1A-205ENST00000473295 OXCT2Q9BYC2 517 aaPredicted RBP7.02□□□□□ -1.29
SCN1A-205ENST00000473295 ZDHHC3Q9NYG2 299 aa7.02□□□□□ -1.29
SCN1A-205ENST00000473295 SERTAD1Q9UHV2 236 aa7.02□□□□□ -1.29
SCN1A-205ENST00000473295 USP17L5A8MUK1 530 aa7.01□□□□□ -1.29
SCN1A-205ENST00000473295 THBS1P07996 1170 aa7.01□□□□□ -1.29
SCN1A-205ENST00000473295 TATP17735 454 aaPredicted RBP7.01□□□□□ -1.29
SCN1A-205ENST00000473295 GSK3AP49840 483 aa7.01□□□□□ -1.29
SCN1A-205ENST00000473295 ATP1A2P50993 1020 aa7.01□□□□□ -1.29
SCN1A-205ENST00000473295 UBAP2LQ14157 1087 aaKnown RBP7.01□□□□□ -1.29
SCN1A-205ENST00000473295 AIDAQ96BJ3 306 aa7.01□□□□□ -1.29
SCN1A-205ENST00000473295 OIP5O43482 229 aa7□□□□□ -1.29
SCN1A-205ENST00000473295 IRS1P35568 1242 aa7□□□□□ -1.29
SCN1A-205ENST00000473295 PLEKHM2Q8IWE5 1019 aa7□□□□□ -1.29
SCN1A-205ENST00000473295 BEND7Q8N7W2 519 aaPredicted RBP7□□□□□ -1.29
SCN1A-205ENST00000473295 GOLGA6L1Q8N7Z2 621 aa7□□□□□ -1.29
SCN1A-205ENST00000473295 CABP1Q9NZU7 370 aa7□□□□□ -1.29
SCN1A-205ENST00000473295 DNMT3AQ9Y6K1 912 aaPredicted RBP7□□□□□ -1.29
SCN1A-205ENST00000473295 BMP4P12644 408 aa6.99□□□□□ -1.29
SCN1A-205ENST00000473295 FGFR3P22607 806 aa6.99□□□□□ -1.29
SCN1A-205ENST00000473295 FOXK2Q01167 660 aa6.99□□□□□ -1.29
SCN1A-205ENST00000473295 KLRG1Q96E93 195 aa6.99□□□□□ -1.29
SCN1A-205ENST00000473295 NDFIP2Q9NV92 336 aa6.99□□□□□ -1.29
SCN1A-205ENST00000473295 IQSEC3Q9UPP2 1182 aaPredicted RBP6.99□□□□□ -1.29
SCN1A-205ENST00000473295 PCDHGC4Q9Y5F7 938 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms