RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 LARP1Q6PKG0 1096 aaKnown RBP13.6□□□□□ -0.23
SGCE-210ENST00000472326 ARID3AQ99856 593 aa13.6□□□□□ -0.23
SGCE-210ENST00000472326 ZNF358Q9NW07 568 aa13.6□□□□□ -0.23
SGCE-210ENST00000472326 RHOQP17081 205 aa13.59□□□□□ -0.23
SGCE-210ENST00000472326 TLR1Q15399 786 aa13.59□□□□□ -0.23
SGCE-210ENST00000472326 LYSMD3Q7Z3D4 306 aa13.59□□□□□ -0.23
SGCE-210ENST00000472326 LARGE2Q8N3Y3 721 aa13.59□□□□□ -0.23
SGCE-210ENST00000472326 FHDC1Q9C0D6 1143 aaPredicted RBP13.59□□□□□ -0.23
SGCE-210ENST00000472326 GRIP2Q9C0E4 1043 aa13.59□□□□□ -0.23
SGCE-210ENST00000472326 PTK7Q13308 1070 aa13.58□□□□□ -0.24
SGCE-210ENST00000472326 SFI1A8K8P3 1242 aa13.57□□□□□ -0.24
SGCE-210ENST00000472326 USP17L15C9J2P7 530 aa13.57□□□□□ -0.24
SGCE-210ENST00000472326 USP17L10C9JJH3 530 aa13.57□□□□□ -0.24
SGCE-210ENST00000472326 USP17L13C9JLJ4 530 aa13.57□□□□□ -0.24
SGCE-210ENST00000472326 USP17L12C9JPN9 530 aa13.57□□□□□ -0.24
SGCE-210ENST00000472326 USP17L11C9JVI0 530 aa13.57□□□□□ -0.24
SGCE-210ENST00000472326 USP17L21D6R901 530 aa13.57□□□□□ -0.24
SGCE-210ENST00000472326 USP17L18D6R9N7 530 aa13.57□□□□□ -0.24
SGCE-210ENST00000472326 USP17L22D6RA61 530 aa13.57□□□□□ -0.24
SGCE-210ENST00000472326 USP17L17D6RBQ6 530 aa13.57□□□□□ -0.24
SGCE-210ENST00000472326 USP17L19D6RCP7 530 aa13.57□□□□□ -0.24
SGCE-210ENST00000472326 USP17L20D6RJB6 530 aa13.57□□□□□ -0.24
SGCE-210ENST00000472326 WASLO00401 505 aaPredicted RBP13.57□□□□□ -0.24
SGCE-210ENST00000472326 DKK1O94907 266 aa13.57□□□□□ -0.24
SGCE-210ENST00000472326 USP17L24Q0WX57 530 aa13.57□□□□□ -0.24
SGCE-210ENST00000472326 ZSCAN10Q96SZ4 725 aaPredicted RBP13.57□□□□□ -0.24
SGCE-210ENST00000472326 SRPK2P78362 688 aaKnown RBP13.56□□□□□ -0.24
SGCE-210ENST00000472326 POU4F2Q12837 409 aa13.56□□□□□ -0.24
SGCE-210ENST00000472326 SIX5Q8N196 739 aa13.56□□□□□ -0.24
SGCE-210ENST00000472326 SMTNP53814 917 aa13.55□□□□□ -0.24
SGCE-210ENST00000472326 FAM196BA6NMK8 535 aa13.54□□□□□ -0.24
SGCE-210ENST00000472326 PTSQ03393 145 aa13.54□□□□□ -0.24
SGCE-210ENST00000472326 DPYDQ12882 1025 aa13.54□□□□□ -0.24
SGCE-210ENST00000472326 TMEM214Q6NUQ4 689 aaKnown RBP13.53□□□□□ -0.24
SGCE-210ENST00000472326 SLC4A9Q96Q91 983 aa13.53□□□□□ -0.24
SGCE-210ENST00000472326 RBM19Q9Y4C8 960 aaKnown RBP13.53□□□□□ -0.24
SGCE-210ENST00000472326 USP3Q9Y6I4 520 aa13.53□□□□□ -0.24
SGCE-210ENST00000472326 A6NJY4 79 aa13.52□□□□□ -0.25
SGCE-210ENST00000472326 BACH1O14867 736 aa13.52□□□□□ -0.25
SGCE-210ENST00000472326 VEGFBP49765 207 aa13.52□□□□□ -0.25
SGCE-210ENST00000472326 ANKMY2Q8IV38 441 aa13.52□□□□□ -0.25
SGCE-210ENST00000472326 TNS4Q8IZW8 715 aa13.52□□□□□ -0.25
SGCE-210ENST00000472326 PBXIP1Q96AQ6 731 aa13.52□□□□□ -0.25
SGCE-210ENST00000472326 LGR5O75473 907 aa13.51□□□□□ -0.25
SGCE-210ENST00000472326 PHKA2P46019 1235 aa13.51□□□□□ -0.25
SGCE-210ENST00000472326 TSEN2Q8NCE0 465 aaKnown RBP13.51□□□□□ -0.25
SGCE-210ENST00000472326 SEC13P55735 322 aa13.5□□□□□ -0.25
SGCE-210ENST00000472326 NBPF10Q6P3W6 841 aaKnown RBP13.5□□□□□ -0.25
SGCE-210ENST00000472326 NBPF15Q8N660 670 aa13.5□□□□□ -0.25
SGCE-210ENST00000472326 ARXQ96QS3 562 aa13.5□□□□□ -0.25
SGCE-210ENST00000472326 SENP3-EIF4A1A0A087X0R7 540 aa13.49□□□□□ -0.25
SGCE-210ENST00000472326 SPATA31C2B4DYI2 1134 aa13.49□□□□□ -0.25
SGCE-210ENST00000472326 GTF2E1P29083 439 aaPredicted RBP13.49□□□□□ -0.25
SGCE-210ENST00000472326 MTFR1Q15390 333 aa13.49□□□□□ -0.25
SGCE-210ENST00000472326 GNASQ5JWF2 1037 aa13.49□□□□□ -0.25
SGCE-210ENST00000472326 TBCELQ5QJ74 424 aa13.49□□□□□ -0.25
SGCE-210ENST00000472326 PPARGC1BQ86YN6 1023 aaKnown RBP13.49□□□□□ -0.25
SGCE-210ENST00000472326 ZNF775Q96BV0 537 aaPredicted RBP13.49□□□□□ -0.25
SGCE-210ENST00000472326 NOVA2Q9UNW9 492 aaKnown RBP13.49□□□□□ -0.25
SGCE-210ENST00000472326 EPHA4P54764 986 aa13.48□□□□□ -0.25
SGCE-210ENST00000472326 C4orf17Q53FE4 359 aa13.48□□□□□ -0.25
SGCE-210ENST00000472326 TAS1R3Q7RTX0 852 aa13.48□□□□□ -0.25
SGCE-210ENST00000472326 SLC35F4A4IF30 521 aa13.47□□□□□ -0.25
SGCE-210ENST00000472326 CCDC155Q8N6L0 562 aa13.47□□□□□ -0.25
SGCE-210ENST00000472326 RHBDD1Q8TEB9 315 aa13.47□□□□□ -0.25
SGCE-210ENST00000472326 NXF1Q9UBU9 619 aaKnown RBP13.47□□□□□ -0.25
SGCE-210ENST00000472326 ZMIZ1Q9ULJ6 1067 aa13.47□□□□□ -0.25
SGCE-210ENST00000472326 IQSEC3Q9UPP2 1182 aaPredicted RBP13.47□□□□□ -0.25
SGCE-210ENST00000472326 SCHIP1Q9P0W5 487 aaPredicted RBP13.46□□□□□ -0.25
SGCE-210ENST00000472326 CDK2AP1O14519 115 aa13.45□□□□□ -0.26
SGCE-210ENST00000472326 PPFIA3O75145 1194 aa13.45□□□□□ -0.26
SGCE-210ENST00000472326 STK32AQ8WU08 396 aa13.45□□□□□ -0.26
SGCE-210ENST00000472326 ATG7O95352 703 aa13.44□□□□□ -0.26
SGCE-210ENST00000472326 PLA2G4AP47712 749 aa13.44□□□□□ -0.26
SGCE-210ENST00000472326 SLC9A9Q8IVB4 645 aa13.44□□□□□ -0.26
SGCE-210ENST00000472326 FAM200AQ8TCP9 573 aa13.44□□□□□ -0.26
SGCE-210ENST00000472326 HINFPQ9BQA5 517 aa13.44□□□□□ -0.26
SGCE-210ENST00000472326 TSPAN10Q9H1Z9 355 aaPredicted RBP13.44□□□□□ -0.26
SGCE-210ENST00000472326 TIMMDC1Q9NPL8 285 aa13.44□□□□□ -0.26
SGCE-210ENST00000472326 M0R2N6 131 aa13.43□□□□□ -0.26
SGCE-210ENST00000472326 TERTO14746 1132 aaKnown RBP13.43□□□□□ -0.26
SGCE-210ENST00000472326 FOXK2Q01167 660 aa13.43□□□□□ -0.26
SGCE-210ENST00000472326 ZNF295-AS1Q8N0V1 137 aa13.43□□□□□ -0.26
SGCE-210ENST00000472326 CABP1Q9NZU7 370 aa13.43□□□□□ -0.26
SGCE-210ENST00000472326 PARP3Q9Y6F1 533 aa13.43□□□□□ -0.26
SGCE-210ENST00000472326 GAS2L2Q8NHY3 880 aa13.42□□□□□ -0.26
SGCE-210ENST00000472326 GAS2L1Q99501 681 aaPredicted RBP13.42□□□□□ -0.26
SGCE-210ENST00000472326 NIFKQ9BYG3 293 aaKnown RBP13.42□□□□□ -0.26
SGCE-210ENST00000472326 ELOAQ14241 798 aaKnown RBP13.4□□□□□ -0.26
SGCE-210ENST00000472326 WDR44Q5JSH3 913 aa13.4□□□□□ -0.26
SGCE-210ENST00000472326 TMEM164Q5U3C3 297 aa13.39□□□□□ -0.27
SGCE-210ENST00000472326 ZDHHC1Q8WTX9 485 aa13.39□□□□□ -0.27
SGCE-210ENST00000472326 GPAMQ9HCL2 828 aa13.39□□□□□ -0.27
SGCE-210ENST00000472326 CUEDC1Q9NWM3 386 aaPredicted RBP13.39□□□□□ -0.27
SGCE-210ENST00000472326 DYRK1BQ9Y463 629 aa13.39□□□□□ -0.27
SGCE-210ENST00000472326 H3BM21 787 aa13.38□□□□□ -0.27
SGCE-210ENST00000472326 NFX1Q12986 1120 aaKnown RBP13.38□□□□□ -0.27
SGCE-210ENST00000472326 RIPOR1Q6ZS17 1223 aa13.38□□□□□ -0.27
SGCE-210ENST00000472326 AIDAQ96BJ3 306 aa13.38□□□□□ -0.27
SGCE-210ENST00000472326 C21orf2O43822 256 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms