RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 KCNMA1Q12791 1236 aa7.86□□□□□ -1.15
PRPF40A-207ENST00000471701 PGBD3Q8N328 593 aa7.86□□□□□ -1.15
PRPF40A-207ENST00000471701 PLPP7Q8NBV4 271 aa7.86□□□□□ -1.15
PRPF40A-207ENST00000471701 WHAMMQ8TF30 809 aa7.86□□□□□ -1.15
PRPF40A-207ENST00000471701 NSFL1CQ9UNZ2 370 aaKnown RBP7.86□□□□□ -1.15
PRPF40A-207ENST00000471701 COG6Q9Y2V7 657 aa7.86□□□□□ -1.15
PRPF40A-207ENST00000471701 HRH3Q9Y5N1 445 aa7.86□□□□□ -1.15
PRPF40A-207ENST00000471701 A0A1B0GTH6 734 aa7.85□□□□□ -1.15
PRPF40A-207ENST00000471701 GAS6Q14393 721 aa7.85□□□□□ -1.15
PRPF40A-207ENST00000471701 LYPD4Q6UWN0 246 aa7.85□□□□□ -1.15
PRPF40A-207ENST00000471701 TLR1Q15399 786 aa7.84□□□□□ -1.15
PRPF40A-207ENST00000471701 RHBDD1Q8TEB9 315 aa7.84□□□□□ -1.15
PRPF40A-207ENST00000471701 FHDC1Q9C0D6 1143 aaPredicted RBP7.84□□□□□ -1.15
PRPF40A-207ENST00000471701 ETNK1Q9HBU6 452 aa7.84□□□□□ -1.15
PRPF40A-207ENST00000471701 GPAMQ9HCL2 828 aa7.84□□□□□ -1.15
PRPF40A-207ENST00000471701 IGF1RP08069 1367 aa7.84□□□□□ -1.16
PRPF40A-207ENST00000471701 ARHGEF15O94989 841 aa7.83□□□□□ -1.16
PRPF40A-207ENST00000471701 INHAP05111 366 aa7.83□□□□□ -1.16
PRPF40A-207ENST00000471701 MX2P20592 715 aa7.83□□□□□ -1.16
PRPF40A-207ENST00000471701 FLIIQ13045 1269 aa7.83□□□□□ -1.16
PRPF40A-207ENST00000471701 C4orf17Q53FE4 359 aa7.83□□□□□ -1.16
PRPF40A-207ENST00000471701 PPARGC1BQ86YN6 1023 aaKnown RBP7.83□□□□□ -1.16
PRPF40A-207ENST00000471701 TMEM151AQ8N4L1 468 aa7.83□□□□□ -1.16
PRPF40A-207ENST00000471701 CFHR5Q9BXR6 569 aa7.83□□□□□ -1.16
PRPF40A-207ENST00000471701 PHF24Q9UPV7 400 aa7.83□□□□□ -1.16
PRPF40A-207ENST00000471701 LZTS3O60299 673 aaPredicted RBP7.82□□□□□ -1.16
PRPF40A-207ENST00000471701 STAU1O95793 577 aaKnown RBP7.82□□□□□ -1.16
PRPF40A-207ENST00000471701 CELA2BP08218 269 aaPredicted RBP7.82□□□□□ -1.16
PRPF40A-207ENST00000471701 GDF10P55107 478 aa7.82□□□□□ -1.16
PRPF40A-207ENST00000471701 EFHC2Q5JST6 749 aa7.82□□□□□ -1.16
PRPF40A-207ENST00000471701 SCARF2Q96GP6 870 aaPredicted RBP7.82□□□□□ -1.16
PRPF40A-207ENST00000471701 GDF11O95390 407 aa7.81□□□□□ -1.16
PRPF40A-207ENST00000471701 SKIP12755 728 aa7.81□□□□□ -1.16
PRPF40A-207ENST00000471701 UBTFP17480 764 aaKnown RBP7.81□□□□□ -1.16
PRPF40A-207ENST00000471701 MSX1P28360 303 aa7.81□□□□□ -1.16
PRPF40A-207ENST00000471701 LBRQ14739 615 aaKnown RBP7.81□□□□□ -1.16
PRPF40A-207ENST00000471701 EML3Q32P44 896 aa7.81□□□□□ -1.16
PRPF40A-207ENST00000471701 SMTNP53814 917 aa7.8□□□□□ -1.16
PRPF40A-207ENST00000471701 RASSF7Q02833 373 aa7.8□□□□□ -1.16
PRPF40A-207ENST00000471701 NEDD1Q8NHV4 660 aa7.8□□□□□ -1.16
PRPF40A-207ENST00000471701 AIDAQ96BJ3 306 aa7.8□□□□□ -1.16
PRPF40A-207ENST00000471701 NIFKQ9BYG3 293 aaKnown RBP7.8□□□□□ -1.16
PRPF40A-207ENST00000471701 ALG2Q9H553 416 aa7.8□□□□□ -1.16
PRPF40A-207ENST00000471701 RUBCNLQ9H714 662 aa7.8□□□□□ -1.16
PRPF40A-207ENST00000471701 SERTAD1Q9UHV2 236 aa7.8□□□□□ -1.16
PRPF40A-207ENST00000471701 NOD1Q9Y239 953 aa7.8□□□□□ -1.16
PRPF40A-207ENST00000471701 BCRP11274 1271 aa7.79□□□□□ -1.16
PRPF40A-207ENST00000471701 SCNN1DP51172 638 aa7.79□□□□□ -1.16
PRPF40A-207ENST00000471701 TBC1D9Q6ZT07 1266 aa7.79□□□□□ -1.16
PRPF40A-207ENST00000471701 BACH1O14867 736 aa7.78□□□□□ -1.16
PRPF40A-207ENST00000471701 IRS1P35568 1242 aa7.78□□□□□ -1.16
PRPF40A-207ENST00000471701 MAP2K3P46734 347 aa7.78□□□□□ -1.16
PRPF40A-207ENST00000471701 POM121Q96HA1 1249 aa7.78□□□□□ -1.16
PRPF40A-207ENST00000471701 PIK3CDO00329 1044 aa7.77□□□□□ -1.17
PRPF40A-207ENST00000471701 PLA2G4AP47712 749 aa7.77□□□□□ -1.17
PRPF40A-207ENST00000471701 NFATC2IPQ8NCF5 419 aa7.77□□□□□ -1.17
PRPF40A-207ENST00000471701 ACDQ96AP0 544 aa7.77□□□□□ -1.17
PRPF40A-207ENST00000471701 A6NJY4 79 aa7.76□□□□□ -1.17
PRPF40A-207ENST00000471701 CDK2AP1O14519 115 aa7.76□□□□□ -1.17
PRPF40A-207ENST00000471701 PSME1Q06323 249 aa7.76□□□□□ -1.17
PRPF40A-207ENST00000471701 KANK3Q6NY19 840 aa7.76□□□□□ -1.17
PRPF40A-207ENST00000471701 KCTD17Q8N5Z5 321 aa7.76□□□□□ -1.17
PRPF40A-207ENST00000471701 BEND7Q8N7W2 519 aaPredicted RBP7.76□□□□□ -1.17
PRPF40A-207ENST00000471701 C1orf216Q8TAB5 229 aa7.76□□□□□ -1.17
PRPF40A-207ENST00000471701 SLC4A9Q96Q91 983 aa7.76□□□□□ -1.17
PRPF40A-207ENST00000471701 PCDHGA11Q9Y5H2 935 aa7.76□□□□□ -1.17
PRPF40A-207ENST00000471701 PHF20L1A8MW92 1017 aa7.75□□□□□ -1.17
PRPF40A-207ENST00000471701 GSK3AP49840 483 aa7.75□□□□□ -1.17
PRPF40A-207ENST00000471701 ARSJQ5FYB0 599 aaPredicted RBP7.75□□□□□ -1.17
PRPF40A-207ENST00000471701 FIGNL1Q6PIW4 674 aa7.75□□□□□ -1.17
PRPF40A-207ENST00000471701 PODNQ7Z5L7 613 aa7.75□□□□□ -1.17
PRPF40A-207ENST00000471701 OXCT2Q9BYC2 517 aaPredicted RBP7.75□□□□□ -1.17
PRPF40A-207ENST00000471701 CRISPLD1Q9H336 500 aa7.75□□□□□ -1.17
PRPF40A-207ENST00000471701 LRRC4BQ9NT99 713 aa7.75□□□□□ -1.17
PRPF40A-207ENST00000471701 CABP1Q9NZU7 370 aa7.75□□□□□ -1.17
PRPF40A-207ENST00000471701 ATXN7L1Q9ULK2 861 aaPredicted RBP7.75□□□□□ -1.17
PRPF40A-207ENST00000471701 TMEM229AB2RXF0 380 aa7.74□□□□□ -1.17
PRPF40A-207ENST00000471701 GTF2IP78347 998 aa7.74□□□□□ -1.17
PRPF40A-207ENST00000471701 NCOA4Q13772 614 aa7.74□□□□□ -1.17
PRPF40A-207ENST00000471701 NBPF1Q3BBV0 1214 aa7.74□□□□□ -1.17
PRPF40A-207ENST00000471701 HDGFL1Q5TGJ6 251 aa7.74□□□□□ -1.17
PRPF40A-207ENST00000471701 KLRG1Q96E93 195 aa7.74□□□□□ -1.17
PRPF40A-207ENST00000471701 OIP5O43482 229 aa7.73□□□□□ -1.17
PRPF40A-207ENST00000471701 THBS1P07996 1170 aa7.73□□□□□ -1.17
PRPF40A-207ENST00000471701 BMP4P12644 408 aa7.73□□□□□ -1.17
PRPF40A-207ENST00000471701 TATP17735 454 aaPredicted RBP7.73□□□□□ -1.17
PRPF40A-207ENST00000471701 MTFR1Q15390 333 aa7.73□□□□□ -1.17
PRPF40A-207ENST00000471701 TMEM132AQ24JP5 1023 aa7.73□□□□□ -1.17
PRPF40A-207ENST00000471701 NLRP8Q86W28 1048 aa7.73□□□□□ -1.17
PRPF40A-207ENST00000471701 TRIM50Q86XT4 487 aa7.73□□□□□ -1.17
PRPF40A-207ENST00000471701 DEPDC4Q8N2C3 294 aa7.73□□□□□ -1.17
PRPF40A-207ENST00000471701 GALNT6Q8NCL4 622 aa7.73□□□□□ -1.17
PRPF40A-207ENST00000471701 GJA3Q9Y6H8 435 aa7.73□□□□□ -1.17
PRPF40A-207ENST00000471701 BNIP3LO60238 219 aa7.72□□□□□ -1.17
PRPF40A-207ENST00000471701 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.72□□□□□ -1.17
PRPF40A-207ENST00000471701 ABHD17AQ96GS6 310 aa7.72□□□□□ -1.17
PRPF40A-207ENST00000471701 ZCCHC2Q9C0B9 1178 aaKnown RBP7.72□□□□□ -1.17
PRPF40A-207ENST00000471701 GDF2Q9UK05 429 aaPredicted RBP7.72□□□□□ -1.17
PRPF40A-207ENST00000471701 PCDHGC4Q9Y5F7 938 aa7.72□□□□□ -1.17
PRPF40A-207ENST00000471701 CNTNAP5Q8WYK1 1306 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms