RNA–Protein interactions for RNA: ENST00000469939.1

TTC3-213, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-213ENST00000469939 ETNK1Q9HBU6 452 aa7.36□□□□□ -1.23
TTC3-213ENST00000469939 PCDHGA11Q9Y5H2 935 aa7.36□□□□□ -1.23
TTC3-213ENST00000469939 MAFBQ9Y5Q3 323 aaPredicted RBP7.36□□□□□ -1.23
TTC3-213ENST00000469939 PPP1R15AO75807 674 aaPredicted RBP7.35□□□□□ -1.23
TTC3-213ENST00000469939 STAU1O95793 577 aaKnown RBP7.35□□□□□ -1.23
TTC3-213ENST00000469939 GTF2IP78347 998 aa7.35□□□□□ -1.23
TTC3-213ENST00000469939 SLC27A3Q5K4L6 730 aa7.35□□□□□ -1.23
TTC3-213ENST00000469939 TMCO4Q5TGY1 634 aa7.35□□□□□ -1.23
TTC3-213ENST00000469939 LYSMD3Q7Z3D4 306 aa7.35□□□□□ -1.23
TTC3-213ENST00000469939 TRIM50Q86XT4 487 aa7.35□□□□□ -1.23
TTC3-213ENST00000469939 XAGE2Q96GT9 111 aa7.35□□□□□ -1.23
TTC3-213ENST00000469939 SCNN1DP51172 638 aa7.34□□□□□ -1.23
TTC3-213ENST00000469939 GDF10P55107 478 aa7.34□□□□□ -1.23
TTC3-213ENST00000469939 CENPCQ03188 943 aa7.34□□□□□ -1.23
TTC3-213ENST00000469939 GRIP2Q9C0E4 1043 aa7.34□□□□□ -1.23
TTC3-213ENST00000469939 MKRN1Q9UHC7 482 aaKnown RBP7.34□□□□□ -1.23
TTC3-213ENST00000469939 MTMR7Q9Y216 660 aa7.34□□□□□ -1.23
TTC3-213ENST00000469939 HRH3Q9Y5N1 445 aa7.34□□□□□ -1.23
TTC3-213ENST00000469939 WASLO00401 505 aaPredicted RBP7.33□□□□□ -1.24
TTC3-213ENST00000469939 INHAP05111 366 aa7.33□□□□□ -1.24
TTC3-213ENST00000469939 VSIG8P0DPA2 414 aa7.33□□□□□ -1.24
TTC3-213ENST00000469939 ATP1A2P50993 1020 aa7.33□□□□□ -1.24
TTC3-213ENST00000469939 PTSQ03393 145 aa7.33□□□□□ -1.24
TTC3-213ENST00000469939 PSME1Q06323 249 aa7.33□□□□□ -1.24
TTC3-213ENST00000469939 PRICKLE2Q7Z3G6 844 aa7.33□□□□□ -1.24
TTC3-213ENST00000469939 TMEM229AB2RXF0 380 aa7.32□□□□□ -1.24
TTC3-213ENST00000469939 LMOD1P29536 600 aaPredicted RBP7.32□□□□□ -1.24
TTC3-213ENST00000469939 MFAP1P55081 439 aaKnown RBP7.32□□□□□ -1.24
TTC3-213ENST00000469939 PPFIA3O75145 1194 aa7.31□□□□□ -1.24
TTC3-213ENST00000469939 CLDN10P78369 228 aa7.31□□□□□ -1.24
TTC3-213ENST00000469939 TLR1Q15399 786 aa7.31□□□□□ -1.24
TTC3-213ENST00000469939 CFAP70Q5T0N1 1121 aa7.31□□□□□ -1.24
TTC3-213ENST00000469939 OGFOD1Q8N543 542 aa7.31□□□□□ -1.24
TTC3-213ENST00000469939 ZSCAN10Q96SZ4 725 aaPredicted RBP7.31□□□□□ -1.24
TTC3-213ENST00000469939 FHDC1Q9C0D6 1143 aaPredicted RBP7.31□□□□□ -1.24
TTC3-213ENST00000469939 DNAAF2Q9NVR5 837 aaKnown RBP7.31□□□□□ -1.24
TTC3-213ENST00000469939 ACIN1Q9UKV3 1341 aaKnown RBP7.3□□□□□ -1.24
TTC3-213ENST00000469939 SLC35F4A4IF30 521 aa7.3□□□□□ -1.24
TTC3-213ENST00000469939 ZBTB7BO15156 539 aaPredicted RBP7.3□□□□□ -1.24
TTC3-213ENST00000469939 RHOQP17081 205 aa7.3□□□□□ -1.24
TTC3-213ENST00000469939 GTF2E1P29083 439 aaPredicted RBP7.3□□□□□ -1.24
TTC3-213ENST00000469939 POU4F2Q12837 409 aa7.3□□□□□ -1.24
TTC3-213ENST00000469939 LARGE2Q8N3Y3 721 aa7.3□□□□□ -1.24
TTC3-213ENST00000469939 CCDC155Q8N6L0 562 aa7.3□□□□□ -1.24
TTC3-213ENST00000469939 SERTAD1Q9UHV2 236 aa7.3□□□□□ -1.24
TTC3-213ENST00000469939 SENP3-EIF4A1A0A087X0R7 540 aa7.29□□□□□ -1.24
TTC3-213ENST00000469939 SPATA31C2B4DYI2 1134 aa7.29□□□□□ -1.24
TTC3-213ENST00000469939 RASA1P20936 1047 aa7.29□□□□□ -1.24
TTC3-213ENST00000469939 SMTNP53814 917 aa7.29□□□□□ -1.24
TTC3-213ENST00000469939 CCDC102BQ68D86 513 aa7.29□□□□□ -1.24
TTC3-213ENST00000469939 TMEM214Q6NUQ4 689 aaKnown RBP7.29□□□□□ -1.24
TTC3-213ENST00000469939 NBPF10Q6P3W6 841 aaKnown RBP7.29□□□□□ -1.24
TTC3-213ENST00000469939 TAS1R3Q7RTX0 852 aa7.29□□□□□ -1.24
TTC3-213ENST00000469939 NBPF15Q8N660 670 aa7.29□□□□□ -1.24
TTC3-213ENST00000469939 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.29□□□□□ -1.24
TTC3-213ENST00000469939 TPCN2Q8NHX9 752 aa7.29□□□□□ -1.24
TTC3-213ENST00000469939 SLC4A9Q96Q91 983 aa7.29□□□□□ -1.24
TTC3-213ENST00000469939 KIAA1024Q9UPX6 916 aa7.29□□□□□ -1.24
TTC3-213ENST00000469939 BACH1O14867 736 aa7.28□□□□□ -1.24
TTC3-213ENST00000469939 WDR44Q5JSH3 913 aa7.28□□□□□ -1.24
TTC3-213ENST00000469939 GNASQ5JWF2 1037 aa7.28□□□□□ -1.24
TTC3-213ENST00000469939 KANK4Q5T7N3 995 aaPredicted RBP7.28□□□□□ -1.24
TTC3-213ENST00000469939 PPARGC1BQ86YN6 1023 aaKnown RBP7.28□□□□□ -1.24
TTC3-213ENST00000469939 ZNF594Q96JF6 807 aaPredicted RBP7.28□□□□□ -1.24
TTC3-213ENST00000469939 VRTNQ9H8Y1 702 aa7.28□□□□□ -1.24
TTC3-213ENST00000469939 ZNF358Q9NW07 568 aa7.28□□□□□ -1.24
TTC3-213ENST00000469939 RFX1P22670 979 aa7.27□□□□□ -1.25
TTC3-213ENST00000469939 PDE4CQ08493 712 aa7.27□□□□□ -1.25
TTC3-213ENST00000469939 KCNMA1Q12791 1236 aa7.27□□□□□ -1.25
TTC3-213ENST00000469939 LARP1Q6PKG0 1096 aaKnown RBP7.27□□□□□ -1.25
TTC3-213ENST00000469939 SIX5Q8N196 739 aa7.27□□□□□ -1.25
TTC3-213ENST00000469939 RHBDD1Q8TEB9 315 aa7.27□□□□□ -1.25
TTC3-213ENST00000469939 FOXD4L4Q8WXT5 416 aaPredicted RBP7.27□□□□□ -1.25
TTC3-213ENST00000469939 RBM19Q9Y4C8 960 aaKnown RBP7.27□□□□□ -1.25
TTC3-213ENST00000469939 LOC100996750A0A140TA64 210 aa7.26□□□□□ -1.25
TTC3-213ENST00000469939 A6NJY4 79 aa7.26□□□□□ -1.25
TTC3-213ENST00000469939 MTFR1Q15390 333 aa7.26□□□□□ -1.25
TTC3-213ENST00000469939 KRTAP4-6Q9BYQ5 205 aa7.26□□□□□ -1.25
TTC3-213ENST00000469939 TIMMDC1Q9NPL8 285 aa7.26□□□□□ -1.25
TTC3-213ENST00000469939 DYRK1BQ9Y463 629 aa7.26□□□□□ -1.25
TTC3-213ENST00000469939 FAM196BA6NMK8 535 aa7.25□□□□□ -1.25
TTC3-213ENST00000469939 CDK2AP1O14519 115 aa7.25□□□□□ -1.25
TTC3-213ENST00000469939 DKK1O94907 266 aa7.25□□□□□ -1.25
TTC3-213ENST00000469939 ITGA6P23229 1130 aa7.25□□□□□ -1.25
TTC3-213ENST00000469939 PHKA2P46019 1235 aa7.25□□□□□ -1.25
TTC3-213ENST00000469939 PTK7Q13308 1070 aa7.25□□□□□ -1.25
TTC3-213ENST00000469939 SUZ12Q15022 739 aaKnown RBP7.25□□□□□ -1.25
TTC3-213ENST00000469939 CRTC2Q53ET0 693 aaPredicted RBP7.25□□□□□ -1.25
TTC3-213ENST00000469939 C4orf17Q53FE4 359 aa7.25□□□□□ -1.25
TTC3-213ENST00000469939 ZNF428Q96B54 188 aa7.25□□□□□ -1.25
TTC3-213ENST00000469939 CNTNAP3BQ96NU0 1288 aa7.25□□□□□ -1.25
TTC3-213ENST00000469939 CNTNAP3Q9BZ76 1288 aa7.25□□□□□ -1.25
TTC3-213ENST00000469939 USP17L15C9J2P7 530 aa7.24□□□□□ -1.25
TTC3-213ENST00000469939 USP17L10C9JJH3 530 aa7.24□□□□□ -1.25
TTC3-213ENST00000469939 USP17L13C9JLJ4 530 aa7.24□□□□□ -1.25
TTC3-213ENST00000469939 USP17L12C9JPN9 530 aa7.24□□□□□ -1.25
TTC3-213ENST00000469939 USP17L11C9JVI0 530 aa7.24□□□□□ -1.25
TTC3-213ENST00000469939 USP17L21D6R901 530 aa7.24□□□□□ -1.25
TTC3-213ENST00000469939 USP17L18D6R9N7 530 aa7.24□□□□□ -1.25
TTC3-213ENST00000469939 USP17L22D6RA61 530 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms