RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 TRERF1Q96PN7 1200 aa7.77□□□□□ -1.17
SSR3-204ENST00000467733 DYRK1BQ9Y463 629 aa7.77□□□□□ -1.17
SSR3-204ENST00000467733 IGF1RP08069 1367 aa7.76□□□□□ -1.17
SSR3-204ENST00000467733 FAM117AQ9C073 453 aa7.76□□□□□ -1.17
SSR3-204ENST00000467733 LRRC4BQ9NT99 713 aa7.76□□□□□ -1.17
SSR3-204ENST00000467733 ZBBXA8MT70 800 aa7.75□□□□□ -1.17
SSR3-204ENST00000467733 BCRP11274 1271 aa7.75□□□□□ -1.17
SSR3-204ENST00000467733 RFC5P40937 340 aa7.75□□□□□ -1.17
SSR3-204ENST00000467733 RIPOR1Q6ZS17 1223 aa7.75□□□□□ -1.17
SSR3-204ENST00000467733 BEND7Q8N7W2 519 aaPredicted RBP7.75□□□□□ -1.17
SSR3-204ENST00000467733 ZNF592Q92610 1267 aa7.75□□□□□ -1.17
SSR3-204ENST00000467733 GPBP1L1Q9HC44 474 aaPredicted RBP7.75□□□□□ -1.17
SSR3-204ENST00000467733 NSFL1CQ9UNZ2 370 aaKnown RBP7.75□□□□□ -1.17
SSR3-204ENST00000467733 ADAMTS12P58397 1594 aa7.75□□□□□ -1.17
SSR3-204ENST00000467733 GRIN2AQ12879 1464 aa7.75□□□□□ -1.17
SSR3-204ENST00000467733 MEN1O00255 615 aa7.74□□□□□ -1.17
SSR3-204ENST00000467733 MSTNO14793 375 aa7.74□□□□□ -1.17
SSR3-204ENST00000467733 SLC27A3Q5K4L6 730 aa7.74□□□□□ -1.17
SSR3-204ENST00000467733 RNF20Q5VTR2 975 aa7.74□□□□□ -1.17
SSR3-204ENST00000467733 NEDD1Q8NHV4 660 aa7.74□□□□□ -1.17
SSR3-204ENST00000467733 NLRP3Q96P20 1036 aa7.74□□□□□ -1.17
SSR3-204ENST00000467733 NUP160Q12769 1436 aa7.74□□□□□ -1.17
SSR3-204ENST00000467733 ABCA10Q8WWZ4 1543 aa7.73□□□□□ -1.17
SSR3-204ENST00000467733 GPR25O00155 361 aa7.73□□□□□ -1.17
SSR3-204ENST00000467733 ERVK-9P63128 1117 aa7.73□□□□□ -1.17
SSR3-204ENST00000467733 PLA2G4EQ3MJ16 856 aa7.73□□□□□ -1.17
SSR3-204ENST00000467733 WDR44Q5JSH3 913 aa7.73□□□□□ -1.17
SSR3-204ENST00000467733 CC2D2BQ6DHV5 1058 aa7.73□□□□□ -1.17
SSR3-204ENST00000467733 CYP2U1Q7Z449 544 aa7.73□□□□□ -1.17
SSR3-204ENST00000467733 DCAF5Q96JK2 942 aa7.73□□□□□ -1.17
SSR3-204ENST00000467733 PCDHB9Q9Y5E1 797 aa7.73□□□□□ -1.17
SSR3-204ENST00000467733 KDM6BO15054 1643 aa7.73□□□□□ -1.17
SSR3-204ENST00000467733 DIP2BQ9P265 1576 aa7.72□□□□□ -1.17
SSR3-204ENST00000467733 A0A1W2PRU2 124 aa7.72□□□□□ -1.17
SSR3-204ENST00000467733 GIGYF1O75420 1035 aaPredicted RBP7.72□□□□□ -1.17
SSR3-204ENST00000467733 MCCD1P59942 119 aaPredicted RBP7.72□□□□□ -1.17
SSR3-204ENST00000467733 DBN1Q16643 649 aa7.72□□□□□ -1.17
SSR3-204ENST00000467733 TMEM259Q4ZIN3 620 aa7.72□□□□□ -1.17
SSR3-204ENST00000467733 TRIM34Q9BYJ4 488 aa7.72□□□□□ -1.17
SSR3-204ENST00000467733 ABCC10Q5T3U5 1492 aa7.71□□□□□ -1.18
SSR3-204ENST00000467733 MX2P20592 715 aa7.71□□□□□ -1.18
SSR3-204ENST00000467733 CLN3Q13286 438 aa7.71□□□□□ -1.18
SSR3-204ENST00000467733 GTPBP3Q969Y2 492 aaKnown RBP7.71□□□□□ -1.18
SSR3-204ENST00000467733 GAS2L1Q99501 681 aaPredicted RBP7.71□□□□□ -1.18
SSR3-204ENST00000467733 MAPKBP1O60336 1514 aa7.71□□□□□ -1.18
SSR3-204ENST00000467733 CNTNAP5Q8WYK1 1306 aa7.71□□□□□ -1.18
SSR3-204ENST00000467733 SPATA31C2B4DYI2 1134 aa7.7□□□□□ -1.18
SSR3-204ENST00000467733 NBPF10Q6P3W6 841 aaKnown RBP7.7□□□□□ -1.18
SSR3-204ENST00000467733 NBPF15Q8N660 670 aa7.7□□□□□ -1.18
SSR3-204ENST00000467733 ACDQ96AP0 544 aa7.7□□□□□ -1.18
SSR3-204ENST00000467733 SPOCK3Q9BQ16 436 aa7.7□□□□□ -1.18
SSR3-204ENST00000467733 POU4F2Q12837 409 aa7.69□□□□□ -1.18
SSR3-204ENST00000467733 GRIP2Q9C0E4 1043 aa7.69□□□□□ -1.18
SSR3-204ENST00000467733 NUCKS1Q9H1E3 243 aaKnown RBP7.69□□□□□ -1.18
SSR3-204ENST00000467733 GOPCQ9HD26 462 aa7.69□□□□□ -1.18
SSR3-204ENST00000467733 TSPOAP1O95153 1857 aa7.68□□□□□ -1.18
SSR3-204ENST00000467733 ADAM23O75077 832 aa7.68□□□□□ -1.18
SSR3-204ENST00000467733 FBXO45P0C2W1 286 aa7.68□□□□□ -1.18
SSR3-204ENST00000467733 MAP2K3P46734 347 aa7.68□□□□□ -1.18
SSR3-204ENST00000467733 TAS1R3Q7RTX0 852 aa7.68□□□□□ -1.18
SSR3-204ENST00000467733 GALNT6Q8NCL4 622 aa7.68□□□□□ -1.18
SSR3-204ENST00000467733 PCMTD1Q96MG8 357 aaPredicted RBP7.68□□□□□ -1.18
SSR3-204ENST00000467733 ESF1Q9H501 851 aaKnown RBP7.68□□□□□ -1.18
SSR3-204ENST00000467733 TIMMDC1Q9NPL8 285 aa7.68□□□□□ -1.18
SSR3-204ENST00000467733 ZNF330Q9Y3S2 320 aaPredicted RBP7.68□□□□□ -1.18
SSR3-204ENST00000467733 WASLO00401 505 aaPredicted RBP7.67□□□□□ -1.18
SSR3-204ENST00000467733 OIP5O43482 229 aa7.67□□□□□ -1.18
SSR3-204ENST00000467733 F11P03951 625 aa7.67□□□□□ -1.18
SSR3-204ENST00000467733 ALYREFQ86V81 257 aaKnown RBP7.67□□□□□ -1.18
SSR3-204ENST00000467733 ADCY10Q96PN6 1610 aa7.67□□□□□ -1.18
SSR3-204ENST00000467733 OXCT2Q9BYC2 517 aaPredicted RBP7.66□□□□□ -1.18
SSR3-204ENST00000467733 ARHGEF10LQ9HCE6 1279 aa7.66□□□□□ -1.18
SSR3-204ENST00000467733 PHF24Q9UPV7 400 aa7.66□□□□□ -1.18
SSR3-204ENST00000467733 RUSC2Q8N2Y8 1516 aa7.66□□□□□ -1.18
SSR3-204ENST00000467733 FHAD1B1AJZ9 1412 aa7.65□□□□□ -1.18
SSR3-204ENST00000467733 TRAK2O60296 914 aa7.65□□□□□ -1.18
SSR3-204ENST00000467733 PROCP04070 461 aa7.65□□□□□ -1.18
SSR3-204ENST00000467733 NR1H3Q13133 447 aa7.65□□□□□ -1.18
SSR3-204ENST00000467733 GJD4Q96KN9 370 aaPredicted RBP7.65□□□□□ -1.18
SSR3-204ENST00000467733 CFHR5Q9BXR6 569 aa7.65□□□□□ -1.18
SSR3-204ENST00000467733 HECW2Q9P2P5 1572 aa7.65□□□□□ -1.18
SSR3-204ENST00000467733 ERICH3Q5RHP9 1530 aa7.64□□□□□ -1.19
SSR3-204ENST00000467733 PRG4Q92954 1404 aaPredicted RBP7.64□□□□□ -1.19
SSR3-204ENST00000467733 ITGB2P05107 769 aa7.64□□□□□ -1.19
SSR3-204ENST00000467733 FAM69CQ0P6D2 419 aa7.64□□□□□ -1.19
SSR3-204ENST00000467733 GDF2Q9UK05 429 aaPredicted RBP7.64□□□□□ -1.19
SSR3-204ENST00000467733 PCDHB11Q9Y5F2 797 aa7.64□□□□□ -1.19
SSR3-204ENST00000467733 ADGRL1O94910 1474 aa7.63□□□□□ -1.19
SSR3-204ENST00000467733 A0A1B0GTH6 734 aa7.63□□□□□ -1.19
SSR3-204ENST00000467733 GNRH1P01148 92 aa7.63□□□□□ -1.19
SSR3-204ENST00000467733 SCTRP47872 440 aa7.63□□□□□ -1.19
SSR3-204ENST00000467733 LBRQ14739 615 aaKnown RBP7.63□□□□□ -1.19
SSR3-204ENST00000467733 TPRNQ4KMQ1 711 aa7.63□□□□□ -1.19
SSR3-204ENST00000467733 OSBPL3Q9H4L5 887 aa7.63□□□□□ -1.19
SSR3-204ENST00000467733 MKL2Q9ULH7 1088 aa7.63□□□□□ -1.19
SSR3-204ENST00000467733 SOCS7O14512 581 aa7.62□□□□□ -1.19
SSR3-204ENST00000467733 ESYT1Q9BSJ8 1104 aa7.62□□□□□ -1.19
SSR3-204ENST00000467733 PPRC1Q5VV67 1664 aaKnown RBP7.62□□□□□ -1.19
SSR3-204ENST00000467733 BIVM-ERCC5R4GMW8 1640 aa7.62□□□□□ -1.19
SSR3-204ENST00000467733 GTF2E1P29083 439 aaPredicted RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms