RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 ESF1Q9H501 851 aaKnown RBP9.39□□□□□ -0.91
SMC4-207ENST00000467263 C4orf17Q53FE4 359 aa9.38□□□□□ -0.91
SMC4-207ENST00000467263 C1orf229Q6ZS94 237 aaPredicted RBP9.38□□□□□ -0.91
SMC4-207ENST00000467263 TRERF1Q96PN7 1200 aa9.38□□□□□ -0.91
SMC4-207ENST00000467263 ZSCAN10Q96SZ4 725 aaPredicted RBP9.38□□□□□ -0.91
SMC4-207ENST00000467263 NEDD1Q8NHV4 660 aa9.37□□□□□ -0.91
SMC4-207ENST00000467263 RUBCNLQ9H714 662 aa9.37□□□□□ -0.91
SMC4-207ENST00000467263 ETNK1Q9HBU6 452 aa9.37□□□□□ -0.91
SMC4-207ENST00000467263 MYCP01106 439 aaPredicted RBP9.36□□□□□ -0.91
SMC4-207ENST00000467263 DCAF5Q96JK2 942 aa9.36□□□□□ -0.91
SMC4-207ENST00000467263 ENAMQ9NRM1 1142 aa9.36□□□□□ -0.91
SMC4-207ENST00000467263 SHISA8B8ZZ34 492 aa9.35□□□□□ -0.91
SMC4-207ENST00000467263 SNRPNP63162 240 aaKnown RBP9.35□□□□□ -0.91
SMC4-207ENST00000467263 VAC14Q08AM6 782 aa9.35□□□□□ -0.91
SMC4-207ENST00000467263 PLA2G4EQ3MJ16 856 aa9.35□□□□□ -0.91
SMC4-207ENST00000467263 ZNF592Q92610 1267 aa9.35□□□□□ -0.91
SMC4-207ENST00000467263 OIP5O43482 229 aa9.34□□□□□ -0.91
SMC4-207ENST00000467263 MSX1P28360 303 aa9.34□□□□□ -0.91
SMC4-207ENST00000467263 DOLKQ9UPQ8 538 aa9.34□□□□□ -0.91
SMC4-207ENST00000467263 A0A1B0GTH6 734 aa9.33□□□□□ -0.92
SMC4-207ENST00000467263 C2CD2LO14523 706 aa9.33□□□□□ -0.92
SMC4-207ENST00000467263 OXLD1Q5BKU9 147 aa9.33□□□□□ -0.92
SMC4-207ENST00000467263 TMEM214Q6NUQ4 689 aaKnown RBP9.33□□□□□ -0.92
SMC4-207ENST00000467263 KLRG1Q96E93 195 aa9.33□□□□□ -0.92
SMC4-207ENST00000467263 OXCT2Q9BYC2 517 aaPredicted RBP9.33□□□□□ -0.92
SMC4-207ENST00000467263 CFHR5Q9BXR6 569 aa9.32□□□□□ -0.92
SMC4-207ENST00000467263 GDPD2Q9HCC8 539 aa9.32□□□□□ -0.92
SMC4-207ENST00000467263 CHIC2Q9UKJ5 165 aa9.32□□□□□ -0.92
SMC4-207ENST00000467263 APBB1O00213 710 aa9.31□□□□□ -0.92
SMC4-207ENST00000467263 SCNN1DP51172 638 aa9.31□□□□□ -0.92
SMC4-207ENST00000467263 GNASQ5JWF2 1037 aa9.31□□□□□ -0.92
SMC4-207ENST00000467263 RNF135Q8IUD6 432 aa9.31□□□□□ -0.92
SMC4-207ENST00000467263 BEND7Q8N7W2 519 aaPredicted RBP9.31□□□□□ -0.92
SMC4-207ENST00000467263 ABHD17AQ96GS6 310 aa9.31□□□□□ -0.92
SMC4-207ENST00000467263 HCN2Q9UL51 889 aa9.31□□□□□ -0.92
SMC4-207ENST00000467263 IGHA1P01876 353 aa9.3□□□□□ -0.92
SMC4-207ENST00000467263 EIF4G2P78344 907 aaKnown RBP eCLIP9.3□□□□□ -0.92
SMC4-207ENST00000467263 SLFNL1Q499Z3 407 aa9.3□□□□□ -0.92
SMC4-207ENST00000467263 PPARGC1BQ86YN6 1023 aaKnown RBP9.3□□□□□ -0.92
SMC4-207ENST00000467263 PHF20L1A8MW92 1017 aa9.29□□□□□ -0.92
SMC4-207ENST00000467263 BNIP3LO60238 219 aa9.29□□□□□ -0.92
SMC4-207ENST00000467263 FOXK2Q01167 660 aa9.29□□□□□ -0.92
SMC4-207ENST00000467263 CTBSQ01459 385 aa9.29□□□□□ -0.92
SMC4-207ENST00000467263 USP4Q13107 963 aa9.29□□□□□ -0.92
SMC4-207ENST00000467263 TLR1Q15399 786 aa9.29□□□□□ -0.92
SMC4-207ENST00000467263 GALNT6Q8NCL4 622 aa9.29□□□□□ -0.92
SMC4-207ENST00000467263 SPOCK3Q9BQ16 436 aa9.29□□□□□ -0.92
SMC4-207ENST00000467263 NDFIP2Q9NV92 336 aa9.29□□□□□ -0.92
SMC4-207ENST00000467263 NSFL1CQ9UNZ2 370 aaKnown RBP9.29□□□□□ -0.92
SMC4-207ENST00000467263 PROCP04070 461 aa9.28□□□□□ -0.92
SMC4-207ENST00000467263 HOXB4P17483 251 aaPredicted RBP9.28□□□□□ -0.92
SMC4-207ENST00000467263 MAP2K3P46734 347 aa9.28□□□□□ -0.92
SMC4-207ENST00000467263 PLA2G4AP47712 749 aa9.28□□□□□ -0.92
SMC4-207ENST00000467263 ESCO1Q5FWF5 840 aa9.28□□□□□ -0.92
SMC4-207ENST00000467263 RHBDD1Q8TEB9 315 aa9.28□□□□□ -0.92
SMC4-207ENST00000467263 LRRC4BQ9NT99 713 aa9.28□□□□□ -0.92
SMC4-207ENST00000467263 ABL2P42684 1182 aa9.27□□□□□ -0.93
SMC4-207ENST00000467263 PODNQ7Z5L7 613 aa9.27□□□□□ -0.93
SMC4-207ENST00000467263 DNAAF2Q9NVR5 837 aaKnown RBP9.27□□□□□ -0.93
SMC4-207ENST00000467263 CSB-PGBD3P0DP91 1061 aa9.26□□□□□ -0.93
SMC4-207ENST00000467263 ATP4AP20648 1035 aa9.26□□□□□ -0.93
SMC4-207ENST00000467263 COL8A1P27658 744 aa9.26□□□□□ -0.93
SMC4-207ENST00000467263 GDF10P55107 478 aa9.26□□□□□ -0.93
SMC4-207ENST00000467263 PGBD3Q8N328 593 aa9.26□□□□□ -0.93
SMC4-207ENST00000467263 USP3Q9Y6I4 520 aa9.26□□□□□ -0.93
SMC4-207ENST00000467263 KRBA1A5PL33 1030 aa9.25□□□□□ -0.93
SMC4-207ENST00000467263 PIK3CDO00329 1044 aa9.25□□□□□ -0.93
SMC4-207ENST00000467263 MSTNO14793 375 aa9.25□□□□□ -0.93
SMC4-207ENST00000467263 INHAP05111 366 aa9.25□□□□□ -0.93
SMC4-207ENST00000467263 ZNF295-AS1Q8N0V1 137 aa9.25□□□□□ -0.93
SMC4-207ENST00000467263 EDARADDQ8WWZ3 215 aa9.25□□□□□ -0.93
SMC4-207ENST00000467263 ATXN7L1Q9ULK2 861 aaPredicted RBP9.25□□□□□ -0.93
SMC4-207ENST00000467263 PHF24Q9UPV7 400 aa9.25□□□□□ -0.93
SMC4-207ENST00000467263 FGFR3P22607 806 aa9.24□□□□□ -0.93
SMC4-207ENST00000467263 GTF2E1P29083 439 aaPredicted RBP9.24□□□□□ -0.93
SMC4-207ENST00000467263 PLPP7Q8NBV4 271 aa9.24□□□□□ -0.93
SMC4-207ENST00000467263 CRISPLD1Q9H336 500 aa9.24□□□□□ -0.93
SMC4-207ENST00000467263 SUV39H2Q9H5I1 410 aa9.24□□□□□ -0.93
SMC4-207ENST00000467263 SERTAD1Q9UHV2 236 aa9.24□□□□□ -0.93
SMC4-207ENST00000467263 GGA1Q9UJY5 639 aa9.24□□□□□ -0.93
SMC4-207ENST00000467263 TMEM229AB2RXF0 380 aa9.23□□□□□ -0.93
SMC4-207ENST00000467263 BMP4P12644 408 aa9.23□□□□□ -0.93
SMC4-207ENST00000467263 LBRQ14739 615 aaKnown RBP9.23□□□□□ -0.93
SMC4-207ENST00000467263 TMEM132AQ24JP5 1023 aa9.23□□□□□ -0.93
SMC4-207ENST00000467263 EFHC2Q5JST6 749 aa9.23□□□□□ -0.93
SMC4-207ENST00000467263 ZCCHC2Q9C0B9 1178 aaKnown RBP9.23□□□□□ -0.93
SMC4-207ENST00000467263 RRAGCQ9HB90 399 aa9.22□□□□□ -0.93
SMC4-207ENST00000467263 SMTNP53814 917 aa9.21□□□□□ -0.94
SMC4-207ENST00000467263 LINC00114Q6XXX2 140 aa9.21□□□□□ -0.94
SMC4-207ENST00000467263 TBC1D9Q6ZT07 1266 aa9.21□□□□□ -0.94
SMC4-207ENST00000467263 AIDAQ96BJ3 306 aa9.21□□□□□ -0.94
SMC4-207ENST00000467263 GDF2Q9UK05 429 aaPredicted RBP9.21□□□□□ -0.94
SMC4-207ENST00000467263 IQSEC3Q9UPP2 1182 aaPredicted RBP9.21□□□□□ -0.94
SMC4-207ENST00000467263 ADAM23O75077 832 aa9.2□□□□□ -0.94
SMC4-207ENST00000467263 MCM6Q14566 821 aa9.2□□□□□ -0.94
SMC4-207ENST00000467263 GOLGA6L1Q8N7Z2 621 aa9.2□□□□□ -0.94
SMC4-207ENST00000467263 PRM3Q9NNZ6 103 aa9.2□□□□□ -0.94
SMC4-207ENST00000467263 KLF15Q9UIH9 416 aa9.2□□□□□ -0.94
SMC4-207ENST00000467263 SLCO4C1Q6ZQN7 724 aa9.19□□□□□ -0.94
SMC4-207ENST00000467263 MKL2Q9ULH7 1088 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms