RNA–Protein interactions for RNA: ENST00000465896.5

PHC3-201, Transcript of polyhomeotic homolog 3, humanhuman

TSL 5

Gene PHC3, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-201ENST00000465896 ATG3Q9NT62 314 aa17■□□□□ 0.31
PHC3-201ENST00000465896 PHKG2P15735 406 aa16.99■□□□□ 0.31
PHC3-201ENST00000465896 POLKQ9UBT6 870 aa16.99■□□□□ 0.31
PHC3-201ENST00000465896 HSPA6P17066 643 aa16.98■□□□□ 0.31
PHC3-201ENST00000465896 GNPATO15228 680 aa16.97■□□□□ 0.31
PHC3-201ENST00000465896 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.97■□□□□ 0.313e-7■■□□□ 11.7
PHC3-201ENST00000465896 ADAMTS7Q9UKP4 1686 aa16.97■□□□□ 0.31
PHC3-201ENST00000465896 C10orf71Q711Q0 1435 aa16.96■□□□□ 0.31
PHC3-201ENST00000465896 PPM1GO15355 546 aaPredicted RBP16.96■□□□□ 0.31
PHC3-201ENST00000465896 EIF4A2Q14240 407 aaKnown RBP16.96■□□□□ 0.31
PHC3-201ENST00000465896 SPG7Q9UQ90 795 aa16.96■□□□□ 0.31
PHC3-201ENST00000465896 KDM6AO15550 1401 aaPredicted RBP16.96■□□□□ 0.3
PHC3-201ENST00000465896 MMP10P09238 476 aa16.95■□□□□ 0.3
PHC3-201ENST00000465896 ATP6V1AP38606 617 aa16.95■□□□□ 0.3
PHC3-201ENST00000465896 TMOD3Q9NYL9 352 aa16.95■□□□□ 0.3
PHC3-201ENST00000465896 TJP1Q07157 1748 aa16.95■□□□□ 0.3
PHC3-201ENST00000465896 ARFGEF1Q9Y6D6 1849 aa16.94■□□□□ 0.3
PHC3-201ENST00000465896 IFNL2Q8IZJ0 200 aa16.93■□□□□ 0.3
PHC3-201ENST00000465896 A0A0G2JLW4 131 aa16.91■□□□□ 0.3
PHC3-201ENST00000465896 KCNA3P22001 575 aa16.91■□□□□ 0.3
PHC3-201ENST00000465896 CDCA8Q53HL2 280 aa16.91■□□□□ 0.3
PHC3-201ENST00000465896 GYS1P13807 737 aa16.9■□□□□ 0.3
PHC3-201ENST00000465896 HMGB2P26583 209 aaKnown RBP16.9■□□□□ 0.3
PHC3-201ENST00000465896 ARHGEF1Q92888 912 aaKnown RBP16.9■□□□□ 0.3
PHC3-201ENST00000465896 PLEKHG2Q9H7P9 1386 aa16.89■□□□□ 0.3
PHC3-201ENST00000465896 DNAJC5GQ8N7S2 189 aa16.89■□□□□ 0.29
PHC3-201ENST00000465896 SCN11AQ9UI33 1791 aa16.89■□□□□ 0.29
PHC3-201ENST00000465896 SBF1O95248 1867 aa16.88■□□□□ 0.29
PHC3-201ENST00000465896 DPEP1P16444 411 aa16.88■□□□□ 0.29
PHC3-201ENST00000465896 VIRMAQ69YN4 1812 aaKnown RBP16.88■□□□□ 0.29
PHC3-201ENST00000465896 CNTNAP4Q9C0A0 1308 aa16.88■□□□□ 0.29
PHC3-201ENST00000465896 WDR90Q96KV7 1748 aa16.87■□□□□ 0.29
PHC3-201ENST00000465896 TNNT2P45379 298 aaPredicted RBP16.87■□□□□ 0.29
PHC3-201ENST00000465896 TGFB2P61812 414 aa16.87■□□□□ 0.29
PHC3-201ENST00000465896 RC3H1Q5TC82 1133 aaKnown RBP16.87■□□□□ 0.29
PHC3-201ENST00000465896 AEBP1Q8IUX7 1158 aa16.87■□□□□ 0.29
PHC3-201ENST00000465896 ERVV-2B6SEH9 535 aa16.86■□□□□ 0.29
PHC3-201ENST00000465896 RPS6KA4O75676 772 aa16.86■□□□□ 0.29
PHC3-201ENST00000465896 TRAPPC3LQ5T215 181 aa16.86■□□□□ 0.29
PHC3-201ENST00000465896 NMRK2Q9NPI5 230 aa16.86■□□□□ 0.29
PHC3-201ENST00000465896 BCS1LQ9Y276 419 aa16.86■□□□□ 0.29
PHC3-201ENST00000465896 RTCBQ9Y3I0 505 aaKnown RBP16.86■□□□□ 0.29
PHC3-201ENST00000465896 RBM42Q9BTD8 480 aaKnown RBP16.85■□□□□ 0.29
PHC3-201ENST00000465896 AFDNP55196 1824 aaKnown RBP16.84■□□□□ 0.29
PHC3-201ENST00000465896 DDR1Q08345 913 aa16.84■□□□□ 0.29
PHC3-201ENST00000465896 NLGN1Q8N2Q7 840 aa16.84■□□□□ 0.29
PHC3-201ENST00000465896 DCAF5Q96JK2 942 aa16.84■□□□□ 0.29
PHC3-201ENST00000465896 SRP68Q9UHB9 627 aaKnown RBP16.84■□□□□ 0.29
PHC3-201ENST00000465896 ADRA2BP18089 450 aa16.83■□□□□ 0.28
PHC3-201ENST00000465896 NRXN2Q9P2S2 1712 aa16.82■□□□□ 0.28
PHC3-201ENST00000465896 FKBP8Q14318 412 aa16.82■□□□□ 0.28
PHC3-201ENST00000465896 PCNTO95613 3336 aa16.82■□□□□ 0.28
PHC3-201ENST00000465896 TOMM70O94826 608 aa16.81■□□□□ 0.28
PHC3-201ENST00000465896 ZNF530Q6P9A1 599 aaPredicted RBP16.81■□□□□ 0.28
PHC3-201ENST00000465896 ARHGAP27Q6ZUM4 889 aa16.81■□□□□ 0.28
PHC3-201ENST00000465896 DLEC1Q9Y238 1755 aa16.81■□□□□ 0.28
PHC3-201ENST00000465896 KCPQ6ZWJ8 1503 aa16.8■□□□□ 0.28
PHC3-201ENST00000465896 USP42Q9H9J4 1324 aaKnown RBP16.8■□□□□ 0.28
PHC3-201ENST00000465896 FCHSD2O94868 740 aa16.8■□□□□ 0.28
PHC3-201ENST00000465896 CRKLP46109 303 aaKnown RBP16.8■□□□□ 0.28
PHC3-201ENST00000465896 HTRA3P83110 453 aa16.8■□□□□ 0.28
PHC3-201ENST00000465896 INTS5Q6P9B9 1019 aaKnown RBP16.8■□□□□ 0.28
PHC3-201ENST00000465896 CCDC87Q9NVE4 849 aa16.8■□□□□ 0.28
PHC3-201ENST00000465896 PTCD1O75127 700 aaKnown RBP16.79■□□□□ 0.28
PHC3-201ENST00000465896 RFC4P35249 363 aa16.79■□□□□ 0.28
PHC3-201ENST00000465896 APLP1P51693 650 aa16.79■□□□□ 0.28
PHC3-201ENST00000465896 C9orf131Q5VYM1 1079 aa16.79■□□□□ 0.28
PHC3-201ENST00000465896 NFATC2IPQ8NCF5 419 aa16.79■□□□□ 0.28
PHC3-201ENST00000465896 CHRNA5P30532 468 aa16.78■□□□□ 0.28
PHC3-201ENST00000465896 PRELPP51888 382 aa16.78■□□□□ 0.28
PHC3-201ENST00000465896 PLEKHO1Q53GL0 409 aaPredicted RBP16.78■□□□□ 0.28
PHC3-201ENST00000465896 PANK3Q9H999 370 aa16.78■□□□□ 0.28
PHC3-201ENST00000465896 MRC1P22897 1456 aa16.78■□□□□ 0.28
PHC3-201ENST00000465896 TNRC6CQ9HCJ0 1690 aaKnown RBP16.78■□□□□ 0.28
PHC3-201ENST00000465896 HSP90AB1P08238 724 aaKnown RBP16.77■□□□□ 0.28
PHC3-201ENST00000465896 TM4SF1P30408 202 aa16.77■□□□□ 0.28
PHC3-201ENST00000465896 CABP4P57796 275 aa16.77■□□□□ 0.28
PHC3-201ENST00000465896 PARP3Q9Y6F1 533 aa16.77■□□□□ 0.28
PHC3-201ENST00000465896 CCDC88AQ3V6T2 1871 aa16.77■□□□□ 0.27
PHC3-201ENST00000465896 UBR2Q8IWV8 1755 aa16.77■□□□□ 0.27
PHC3-201ENST00000465896 POLRMTO00411 1230 aaKnown RBP16.76■□□□□ 0.27
PHC3-201ENST00000465896 IL13P35225 146 aa16.76■□□□□ 0.27
PHC3-201ENST00000465896 POLR3GLQ9BT43 218 aa16.76■□□□□ 0.27
PHC3-201ENST00000465896 MTHFSP49914 203 aa16.75■□□□□ 0.27
PHC3-201ENST00000465896 AMOTQ4VCS5 1084 aa16.75■□□□□ 0.27
PHC3-201ENST00000465896 ANKRD31Q8N7Z5 1873 aa16.75■□□□□ 0.27
PHC3-201ENST00000465896 HSPA5P11021 654 aaKnown RBP16.74■□□□□ 0.27
PHC3-201ENST00000465896 SULT6B1Q6IMI4 303 aa16.74■□□□□ 0.27
PHC3-201ENST00000465896 DNAJC10Q8IXB1 793 aa16.74■□□□□ 0.27
PHC3-201ENST00000465896 RBM46Q8TBY0 533 aaKnown RBP16.74■□□□□ 0.27
PHC3-201ENST00000465896 BCL2L12Q9HB09 334 aa16.74■□□□□ 0.27
PHC3-201ENST00000465896 LGR6Q9HBX8 967 aa16.74■□□□□ 0.27
PHC3-201ENST00000465896 PIM2Q9P1W9 311 aa16.74■□□□□ 0.27
PHC3-201ENST00000465896 TIAM2Q8IVF5 1701 aa16.73■□□□□ 0.27
PHC3-201ENST00000465896 SOS1Q07889 1333 aaPredicted RBP16.73■□□□□ 0.27
PHC3-201ENST00000465896 TRIM26Q12899 539 aaPredicted RBP16.73■□□□□ 0.27
PHC3-201ENST00000465896 TIMELESSQ9UNS1 1208 aa16.73■□□□□ 0.27
PHC3-201ENST00000465896 CARMIL3Q8ND23 1372 aa16.72■□□□□ 0.27
PHC3-201ENST00000465896 COL11A2P13942 1736 aaPredicted RBP16.71■□□□□ 0.27
PHC3-201ENST00000465896 CYP19A1P11511 503 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms