RNA–Protein interactions for RNA: ENST00000465788.1

SRM-203, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 402 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-203ENST00000465788 PHF14O94880 888 aa17.49■□□□□ 0.39
SRM-203ENST00000465788 LINC00116Q8NCU8 138 aa17.49■□□□□ 0.39
SRM-203ENST00000465788 ATG3Q9NT62 314 aa17.49■□□□□ 0.39
SRM-203ENST00000465788 GNPATO15228 680 aa17.48■□□□□ 0.39
SRM-203ENST00000465788 C1orf141Q5JVX7 400 aa17.48■□□□□ 0.39
SRM-203ENST00000465788 ZNF530Q6P9A1 599 aaPredicted RBP17.48■□□□□ 0.39
SRM-203ENST00000465788 ADRA2BP18089 450 aa17.47■□□□□ 0.39
SRM-203ENST00000465788 KDRP35968 1356 aa17.47■□□□□ 0.39
SRM-203ENST00000465788 CABP4P57796 275 aa17.46■□□□□ 0.39
SRM-203ENST00000465788 ITPK1Q13572 414 aa17.46■□□□□ 0.39
SRM-203ENST00000465788 RC3H1Q5TC82 1133 aaKnown RBP17.46■□□□□ 0.39
SRM-203ENST00000465788 RTCBQ9Y3I0 505 aaKnown RBP17.46■□□□□ 0.39
SRM-203ENST00000465788 YBX3P16989 372 aaKnown RBP eCLIP17.45■□□□□ 0.383e-12■■■□□ 16.8
SRM-203ENST00000465788 MTHFSP49914 203 aa17.44■□□□□ 0.38
SRM-203ENST00000465788 C1QTNF8P60827 252 aa17.44■□□□□ 0.38
SRM-203ENST00000465788 CNTNAP4Q9C0A0 1308 aa17.44■□□□□ 0.38
SRM-203ENST00000465788 GIGYF1O75420 1035 aaPredicted RBP17.43■□□□□ 0.38
SRM-203ENST00000465788 TRAPPC3LQ5T215 181 aa17.43■□□□□ 0.38
SRM-203ENST00000465788 AMIGO3Q86WK7 504 aa17.43■□□□□ 0.38
SRM-203ENST00000465788 NLGN1Q8N2Q7 840 aa17.43■□□□□ 0.38
SRM-203ENST00000465788 RBM42Q9BTD8 480 aaKnown RBP17.43■□□□□ 0.38
SRM-203ENST00000465788 COL5A3P25940 1745 aaPredicted RBP17.43■□□□□ 0.38
SRM-203ENST00000465788 KDM6AO15550 1401 aaPredicted RBP17.42■□□□□ 0.38
SRM-203ENST00000465788 SULT6B1Q6IMI4 303 aa17.42■□□□□ 0.38
SRM-203ENST00000465788 AMER1Q5JTC6 1135 aaPredicted RBP17.41■□□□□ 0.38
SRM-203ENST00000465788 GOLGB1Q14789 3259 aaKnown RBP17.41■□□□□ 0.38
SRM-203ENST00000465788 SCN11AQ9UI33 1791 aa17.4■□□□□ 0.38
SRM-203ENST00000465788 RPS6KA4O75676 772 aa17.4■□□□□ 0.38
SRM-203ENST00000465788 IL13P35225 146 aa17.4■□□□□ 0.38
SRM-203ENST00000465788 KIF13BQ9NQT8 1826 aa17.4■□□□□ 0.38
SRM-203ENST00000465788 CICQ96RK0 1608 aaPredicted RBP17.39■□□□□ 0.38
SRM-203ENST00000465788 MMP10P09238 476 aa17.39■□□□□ 0.37
SRM-203ENST00000465788 RFC4P35249 363 aa17.39■□□□□ 0.37
SRM-203ENST00000465788 AKAP4Q5JQC9 854 aa17.39■□□□□ 0.37
SRM-203ENST00000465788 AEBP1Q8IUX7 1158 aa17.39■□□□□ 0.37
SRM-203ENST00000465788 KIF7Q2M1P5 1343 aa17.39■□□□□ 0.37
SRM-203ENST00000465788 TGFB2P61812 414 aa17.38■□□□□ 0.37
SRM-203ENST00000465788 SENP3-EIF4A1A0A087X0R7 540 aa17.37■□□□□ 0.37
SRM-203ENST00000465788 SMIM5Q71RC9 77 aa17.37■□□□□ 0.37
SRM-203ENST00000465788 NFATC2IPQ8NCF5 419 aa17.37■□□□□ 0.37
SRM-203ENST00000465788 SLC4A9Q96Q91 983 aa17.37■□□□□ 0.37
SRM-203ENST00000465788 CCDC87Q9NVE4 849 aa17.37■□□□□ 0.37
SRM-203ENST00000465788 MYH14Q7Z406 1995 aaKnown RBP17.37■□□□□ 0.37
SRM-203ENST00000465788 ARHGEF1Q92888 912 aaKnown RBP17.36■□□□□ 0.37
SRM-203ENST00000465788 ATP10DQ9P241 1426 aa17.36■□□□□ 0.37
SRM-203ENST00000465788 PTCD1O75127 700 aaKnown RBP17.35■□□□□ 0.37
SRM-203ENST00000465788 PARP3Q9Y6F1 533 aa17.35■□□□□ 0.37
SRM-203ENST00000465788 NPC1L1Q9UHC9 1359 aa17.35■□□□□ 0.37
SRM-203ENST00000465788 C4AP0C0L4 1744 aa17.35■□□□□ 0.37
SRM-203ENST00000465788 ADCY9O60503 1353 aa17.34■□□□□ 0.37
SRM-203ENST00000465788 GYS1P13807 737 aa17.34■□□□□ 0.37
SRM-203ENST00000465788 CRKLP46109 303 aaKnown RBP17.34■□□□□ 0.37
SRM-203ENST00000465788 C10orf71Q711Q0 1435 aa17.34■□□□□ 0.37
SRM-203ENST00000465788 SLC52A2Q9HAB3 445 aa17.34■□□□□ 0.37
SRM-203ENST00000465788 GPBP1L1Q9HC44 474 aaPredicted RBP17.34■□□□□ 0.37
SRM-203ENST00000465788 VIRMAQ69YN4 1812 aaKnown RBP17.33■□□□□ 0.37
SRM-203ENST00000465788 PER1O15534 1290 aaPredicted RBP17.33■□□□□ 0.36
SRM-203ENST00000465788 DIAPH1O60610 1272 aaKnown RBP17.33■□□□□ 0.36
SRM-203ENST00000465788 TJP1Q07157 1748 aa17.33■□□□□ 0.36
SRM-203ENST00000465788 PXDNLA1KZ92 1463 aa17.32■□□□□ 0.36
SRM-203ENST00000465788 MRC1P22897 1456 aa17.32■□□□□ 0.36
SRM-203ENST00000465788 KIAA1551Q9HCM1 1747 aa17.3■□□□□ 0.36
SRM-203ENST00000465788 USP42Q9H9J4 1324 aaKnown RBP17.3■□□□□ 0.36
SRM-203ENST00000465788 RNMTO43148 476 aaKnown RBP17.3■□□□□ 0.36
SRM-203ENST00000465788 N4BP2Q86UW6 1770 aaPredicted RBP17.3■□□□□ 0.36
SRM-203ENST00000465788 ADAMTS7Q9UKP4 1686 aa17.29■□□□□ 0.36
SRM-203ENST00000465788 HMOX1P09601 288 aa17.29■□□□□ 0.36
SRM-203ENST00000465788 CC2D1BQ5T0F9 858 aaKnown RBP17.29■□□□□ 0.36
SRM-203ENST00000465788 VSIG10Q8N0Z9 540 aa17.29■□□□□ 0.36
SRM-203ENST00000465788 ZPR1O75312 459 aa17.28■□□□□ 0.36
SRM-203ENST00000465788 BRCA1P38398 1863 aaKnown RBP17.28■□□□□ 0.36
SRM-203ENST00000465788 ARFGEF1Q9Y6D6 1849 aa17.27■□□□□ 0.36
SRM-203ENST00000465788 BCS1LQ9Y276 419 aa17.27■□□□□ 0.36
SRM-203ENST00000465788 A0A0G2JLW4 131 aa17.26■□□□□ 0.35
SRM-203ENST00000465788 MTHFSDQ2M296 383 aaKnown RBP17.26■□□□□ 0.35
SRM-203ENST00000465788 INTS5Q6P9B9 1019 aaKnown RBP17.26■□□□□ 0.35
SRM-203ENST00000465788 GAS2L2Q8NHY3 880 aa17.26■□□□□ 0.35
SRM-203ENST00000465788 LGR6Q9HBX8 967 aa17.26■□□□□ 0.35
SRM-203ENST00000465788 WWC3Q9ULE0 1092 aa17.26■□□□□ 0.35
SRM-203ENST00000465788 FCHSD2O94868 740 aa17.25■□□□□ 0.35
SRM-203ENST00000465788 DPEP1P16444 411 aa17.25■□□□□ 0.35
SRM-203ENST00000465788 DNAJC10Q8IXB1 793 aa17.25■□□□□ 0.35
SRM-203ENST00000465788 TTC5Q8N0Z6 440 aa17.25■□□□□ 0.35
SRM-203ENST00000465788 PIM2Q9P1W9 311 aa17.25■□□□□ 0.35
SRM-203ENST00000465788 SOS1Q07889 1333 aaPredicted RBP17.24■□□□□ 0.35
SRM-203ENST00000465788 CYP19A1P11511 503 aaPredicted RBP17.24■□□□□ 0.35
SRM-203ENST00000465788 FKBP8Q14318 412 aa17.24■□□□□ 0.35
SRM-203ENST00000465788 CFAP53Q96M91 514 aa17.24■□□□□ 0.35
SRM-203ENST00000465788 KCPQ6ZWJ8 1503 aa17.24■□□□□ 0.35
SRM-203ENST00000465788 UBR2Q8IWV8 1755 aa17.24■□□□□ 0.35
SRM-203ENST00000465788 STARD3NLO95772 234 aa17.23■□□□□ 0.35
SRM-203ENST00000465788 TEX13AQ9BXU3 409 aaPredicted RBP17.23■□□□□ 0.35
SRM-203ENST00000465788 SRP68Q9UHB9 627 aaKnown RBP17.23■□□□□ 0.35
SRM-203ENST00000465788 COL3A1P02461 1466 aaPredicted RBP17.23■□□□□ 0.35
SRM-203ENST00000465788 GNAT3A8MTJ3 354 aa17.22■□□□□ 0.35
SRM-203ENST00000465788 U2SURPO15042 1029 aaKnown RBP17.22■□□□□ 0.35
SRM-203ENST00000465788 TM4SF1P30408 202 aa17.22■□□□□ 0.35
SRM-203ENST00000465788 TEFQ10587 303 aa17.22■□□□□ 0.35
SRM-203ENST00000465788 SLC39A6Q13433 755 aa17.22■□□□□ 0.35
SRM-203ENST00000465788 DALRD3Q5D0E6 543 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms