RNA–Protein interactions for RNA: ENST00000465421.5

SIK3-207, Transcript of SIK family kinase 3, humanhuman

TSL 2

Gene SIK3, Length 3,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-207ENST00000465421 USP26Q9BXU7 913 aa7.91□□□□□ -1.14
SIK3-207ENST00000465421 SSH2Q76I76 1423 aa7.91□□□□□ -1.14
SIK3-207ENST00000465421 ZBTB7BO15156 539 aaPredicted RBP7.91□□□□□ -1.14
SIK3-207ENST00000465421 FKBP5Q13451 457 aaPredicted RBP7.91□□□□□ -1.14
SIK3-207ENST00000465421 NOLC1Q14978 699 aaKnown RBP eCLIP7.91□□□□□ -1.14
SIK3-207ENST00000465421 GRIPAP1Q4V328 841 aa7.91□□□□□ -1.14
SIK3-207ENST00000465421 SIRT2Q8IXJ6 389 aa7.91□□□□□ -1.14
SIK3-207ENST00000465421 ZGPATQ8N5A5 531 aaKnown RBP7.91□□□□□ -1.14
SIK3-207ENST00000465421 TMEM51Q9NW97 253 aa7.91□□□□□ -1.14
SIK3-207ENST00000465421 TERF2IPQ9NYB0 399 aa7.91□□□□□ -1.14
SIK3-207ENST00000465421 FYB1O15117 783 aa7.9□□□□□ -1.14
SIK3-207ENST00000465421 ANKRD45Q5TZF3 282 aa7.9□□□□□ -1.14
SIK3-207ENST00000465421 ANKRD7Q92527 254 aa7.9□□□□□ -1.14
SIK3-207ENST00000465421 CHAMP1Q96JM3 812 aa7.9□□□□□ -1.14
SIK3-207ENST00000465421 CABP2Q9NPB3 220 aa7.9□□□□□ -1.14
SIK3-207ENST00000465421 PHRF1Q9P1Y6 1649 aaKnown RBP7.9□□□□□ -1.14
SIK3-207ENST00000465421 METP08581 1390 aa7.9□□□□□ -1.14
SIK3-207ENST00000465421 HMGB1P09429 215 aaKnown RBP7.9□□□□□ -1.14
SIK3-207ENST00000465421 ALDH1L2Q3SY69 923 aa7.9□□□□□ -1.14
SIK3-207ENST00000465421 PRAM1Q96QH2 718 aa7.9□□□□□ -1.14
SIK3-207ENST00000465421 BCL2L12Q9HB09 334 aa7.9□□□□□ -1.14
SIK3-207ENST00000465421 PAXIP1Q6ZW49 1069 aaPredicted RBP7.9□□□□□ -1.15
SIK3-207ENST00000465421 TICAM2Q86XR7 235 aa7.9□□□□□ -1.15
SIK3-207ENST00000465421 THEMISQ8N1K5 641 aaPredicted RBP7.9□□□□□ -1.15
SIK3-207ENST00000465421 MBD3O95983 291 aa7.89□□□□□ -1.15
SIK3-207ENST00000465421 STAG3Q9UJ98 1225 aa7.89□□□□□ -1.15
SIK3-207ENST00000465421 KIF3AQ9Y496 699 aa7.89□□□□□ -1.15
SIK3-207ENST00000465421 OVOS2A0A0J9YW53 1432 aa7.89□□□□□ -1.15
SIK3-207ENST00000465421 OVOS2Q6IE36 1432 aa7.89□□□□□ -1.15
SIK3-207ENST00000465421 IPO8O15397 1037 aaKnown RBP7.89□□□□□ -1.15
SIK3-207ENST00000465421 TMPOP42166 694 aaKnown RBP7.89□□□□□ -1.15
SIK3-207ENST00000465421 RNF214Q8ND24 703 aa7.89□□□□□ -1.15
SIK3-207ENST00000465421 TSPY26PQ9H489 355 aa7.89□□□□□ -1.15
SIK3-207ENST00000465421 CDK19Q9BWU1 502 aa7.88□□□□□ -1.15
SIK3-207ENST00000465421 CHD2O14647 1828 aaKnown RBP7.88□□□□□ -1.15
SIK3-207ENST00000465421 PIK3C2AO00443 1686 aa7.88□□□□□ -1.15
SIK3-207ENST00000465421 CTIFO43310 598 aaKnown RBP7.88□□□□□ -1.15
SIK3-207ENST00000465421 NOL8Q76FK4 1167 aaKnown RBP7.88□□□□□ -1.15
SIK3-207ENST00000465421 PLEKHM2Q8IWE5 1019 aa7.88□□□□□ -1.15
SIK3-207ENST00000465421 TUBGCP6Q96RT7 1819 aa7.88□□□□□ -1.15
SIK3-207ENST00000465421 UVSSAQ2YD98 709 aa7.88□□□□□ -1.15
SIK3-207ENST00000465421 TAF3Q5VWG9 929 aa7.88□□□□□ -1.15
SIK3-207ENST00000465421 FAM177BA6PVY3 158 aa7.87□□□□□ -1.15
SIK3-207ENST00000465421 BRD1O95696 1058 aa7.87□□□□□ -1.15
SIK3-207ENST00000465421 ZNF830Q96NB3 372 aaPredicted RBP7.87□□□□□ -1.15
SIK3-207ENST00000465421 USP31Q70CQ4 1352 aa7.87□□□□□ -1.15
SIK3-207ENST00000465421 PTPRUQ92729 1446 aa7.87□□□□□ -1.15
SIK3-207ENST00000465421 PTMAP06454 111 aaKnown RBP7.87□□□□□ -1.15
SIK3-207ENST00000465421 DNTTIP2Q5QJE6 756 aaKnown RBP7.87□□□□□ -1.15
SIK3-207ENST00000465421 TTC22Q5TAA0 569 aa7.87□□□□□ -1.15
SIK3-207ENST00000465421 HDGFL2Q7Z4V5 671 aaPredicted RBP7.87□□□□□ -1.15
SIK3-207ENST00000465421 C17orf53Q8N3J3 647 aaPredicted RBP7.87□□□□□ -1.15
SIK3-207ENST00000465421 PDCL2Q8N4E4 241 aa7.87□□□□□ -1.15
SIK3-207ENST00000465421 EID1Q9Y6B2 187 aa7.87□□□□□ -1.15
SIK3-207ENST00000465421 RGPD8O14715 1765 aaPredicted RBP7.86□□□□□ -1.15
SIK3-207ENST00000465421 CFAP44Q96MT7 982 aa7.86□□□□□ -1.15
SIK3-207ENST00000465421 NAP1L2Q9ULW6 460 aaPredicted RBP7.86□□□□□ -1.15
SIK3-207ENST00000465421 TCHHQ07283 1943 aa7.86□□□□□ -1.15
SIK3-207ENST00000465421 SPDYE4A6NLX3 237 aa7.86□□□□□ -1.15
SIK3-207ENST00000465421 WASLO00401 505 aaPredicted RBP7.86□□□□□ -1.15
SIK3-207ENST00000465421 FAM184AQ8NB25 1140 aa7.86□□□□□ -1.15
SIK3-207ENST00000465421 ARHGAP45Q92619 1136 aa7.86□□□□□ -1.15
SIK3-207ENST00000465421 ABCC4O15439 1325 aa7.86□□□□□ -1.15
SIK3-207ENST00000465421 ST18O60284 1047 aa7.86□□□□□ -1.15
SIK3-207ENST00000465421 TTC12Q9H892 705 aaPredicted RBP7.86□□□□□ -1.15
SIK3-207ENST00000465421 ANKARQ7Z5J8 1434 aa7.85□□□□□ -1.15
SIK3-207ENST00000465421 U2AF2P26368 475 aaKnown RBP eCLIP7.85□□□□□ -1.15
SIK3-207ENST00000465421 MMP14P50281 582 aa7.85□□□□□ -1.15
SIK3-207ENST00000465421 FEZ1Q99689 392 aa7.85□□□□□ -1.15
SIK3-207ENST00000465421 ROBO2Q9HCK4 1378 aa7.85□□□□□ -1.15
SIK3-207ENST00000465421 MINK1Q8N4C8 1332 aaPredicted RBP7.85□□□□□ -1.15
SIK3-207ENST00000465421 KIAA1524Q8TCG1 905 aa7.85□□□□□ -1.15
SIK3-207ENST00000465421 ZNF428Q96B54 188 aa7.85□□□□□ -1.15
SIK3-207ENST00000465421 CAMTA1Q9Y6Y1 1673 aa7.85□□□□□ -1.15
SIK3-207ENST00000465421 RIOK3O14730 519 aaKnown RBP7.84□□□□□ -1.15
SIK3-207ENST00000465421 FCHSD2O94868 740 aa7.84□□□□□ -1.15
SIK3-207ENST00000465421 CUL4AQ13619 759 aa7.84□□□□□ -1.15
SIK3-207ENST00000465421 MRPL50Q8N5N7 158 aaKnown RBP7.84□□□□□ -1.15
SIK3-207ENST00000465421 NWD1Q149M9 1564 aa7.84□□□□□ -1.15
SIK3-207ENST00000465421 ADCY5O95622 1261 aa7.84□□□□□ -1.15
SIK3-207ENST00000465421 SRPK2P78362 688 aaKnown RBP7.84□□□□□ -1.15
SIK3-207ENST00000465421 INTS3Q68E01 1043 aaKnown RBP7.84□□□□□ -1.15
SIK3-207ENST00000465421 KCNF1Q9H3M0 494 aa7.84□□□□□ -1.15
SIK3-207ENST00000465421 CHMP4BQ9H444 224 aaKnown RBP7.84□□□□□ -1.15
SIK3-207ENST00000465421 OGFRQ9NZT2 677 aa7.84□□□□□ -1.15
SIK3-207ENST00000465421 DCTPP1Q9H773 170 aa7.84□□□□□ -1.15
SIK3-207ENST00000465421 USP25Q9UHP3 1055 aa7.84□□□□□ -1.15
SIK3-207ENST00000465421 USP6P35125 1406 aa7.84□□□□□ -1.15
SIK3-207ENST00000465421 GADD45BO75293 160 aaPredicted RBP7.83□□□□□ -1.16
SIK3-207ENST00000465421 FBLN1P23142 703 aa7.83□□□□□ -1.16
SIK3-207ENST00000465421 SYCP1Q15431 976 aa7.83□□□□□ -1.16
SIK3-207ENST00000465421 SYAP1Q96A49 352 aaPredicted RBP7.83□□□□□ -1.16
SIK3-207ENST00000465421 THUMPD2Q9BTF0 503 aaKnown RBP7.83□□□□□ -1.16
SIK3-207ENST00000465421 POLKQ9UBT6 870 aa7.83□□□□□ -1.16
SIK3-207ENST00000465421 FAM208AQ9UK61 1670 aaKnown RBP7.83□□□□□ -1.16
SIK3-207ENST00000465421 PLEKHG3A1L390 1219 aa7.83□□□□□ -1.16
SIK3-207ENST00000465421 IL13P35225 146 aa7.83□□□□□ -1.16
SIK3-207ENST00000465421 GABPB1Q06547 395 aaPredicted RBP7.83□□□□□ -1.16
SIK3-207ENST00000465421 TMX3Q96JJ7 454 aa7.83□□□□□ -1.16
SIK3-207ENST00000465421 KIF24Q5T7B8 1368 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms