RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 NOL7Q9UMY1 257 aaKnown RBP15.17■□□□□ 0.02
NUP58-206ENST00000463407 MINDY4BA8MYZ0 360 aa15.17■□□□□ 0.02
NUP58-206ENST00000463407 WDHD1O75717 1129 aaPredicted RBP15.17■□□□□ 0.02
NUP58-206ENST00000463407 CDKL5O76039 1030 aa15.17■□□□□ 0.02
NUP58-206ENST00000463407 MKNK2Q9HBH9 465 aa15.17■□□□□ 0.02
NUP58-206ENST00000463407 PDRG1Q9NUG6 133 aa15.17■□□□□ 0.02
NUP58-206ENST00000463407 JAKMIP1Q96N16 626 aaKnown RBP15.17■□□□□ 0.02
NUP58-206ENST00000463407 ST5P78524 1137 aa15.17■□□□□ 0.02
NUP58-206ENST00000463407 RPRD2Q5VT52 1461 aaKnown RBP15.17■□□□□ 0.02
NUP58-206ENST00000463407 ABCC11Q96J66 1382 aa15.17■□□□□ 0.02
NUP58-206ENST00000463407 DUOX2Q9NRD8 1548 aa15.17■□□□□ 0.02
NUP58-206ENST00000463407 ZCRB1Q8TBF4 217 aaKnown RBP15.17■□□□□ 0.02
NUP58-206ENST00000463407 JMYQ8N9B5 988 aa15.16■□□□□ 0.02
NUP58-206ENST00000463407 PRPF40AO75400 957 aaKnown RBP15.16■□□□□ 0.02
NUP58-206ENST00000463407 DDX46Q7L014 1031 aaKnown RBP15.16■□□□□ 0.02
NUP58-206ENST00000463407 ALDH1L2Q3SY69 923 aa15.16■□□□□ 0.02
NUP58-206ENST00000463407 PPP1R42Q7Z4L9 355 aa15.16■□□□□ 0.02
NUP58-206ENST00000463407 MAP3K2Q9Y2U5 619 aa15.16■□□□□ 0.02
NUP58-206ENST00000463407 AEBP1Q8IUX7 1158 aa15.16■□□□□ 0.02
NUP58-206ENST00000463407 SYCP2Q9BX26 1530 aa15.15■□□□□ 0.02
NUP58-206ENST00000463407 BOLA2Q9H3K6 86 aa15.15■□□□□ 0.02
NUP58-206ENST00000463407 DISP3Q9P2K9 1392 aa15.15■□□□□ 0.02
NUP58-206ENST00000463407 NSD2O96028 1365 aa15.15■□□□□ 0.02
NUP58-206ENST00000463407 FIBPO43427 364 aa15.15■□□□□ 0.02
NUP58-206ENST00000463407 CAVIN1Q6NZI2 390 aaKnown RBP15.15■□□□□ 0.02
NUP58-206ENST00000463407 SMARCA5O60264 1052 aaPredicted RBP15.15■□□□□ 0.02
NUP58-206ENST00000463407 MAP3K12Q12852 859 aa15.15■□□□□ 0.02
NUP58-206ENST00000463407 SYCP1Q15431 976 aa15.15■□□□□ 0.02
NUP58-206ENST00000463407 HSP90AB2PQ58FF8 381 aa15.15■□□□□ 0.02
NUP58-206ENST00000463407 ATP6V1AP38606 617 aa15.14■□□□□ 0.01
NUP58-206ENST00000463407 SLF2Q8IX21 1173 aa15.14■□□□□ 0.01
NUP58-206ENST00000463407 BRPF1P55201 1214 aaPredicted RBP15.14■□□□□ 0.01
NUP58-206ENST00000463407 NKTRP30414 1462 aaKnown RBP15.14■□□□□ 0.01
NUP58-206ENST00000463407 IBSPP21815 317 aaPredicted RBP15.14■□□□□ 0.01
NUP58-206ENST00000463407 KRT32Q14532 448 aa15.14■□□□□ 0.01
NUP58-206ENST00000463407 FBXO3Q9UK99 471 aa15.14■□□□□ 0.01
NUP58-206ENST00000463407 CWC25Q9NXE8 425 aaPredicted RBP15.14■□□□□ 0.01
NUP58-206ENST00000463407 UGGT2Q9NYU1 1516 aa15.14■□□□□ 0.01
NUP58-206ENST00000463407 FILIP1LQ4L180 1135 aa15.14■□□□□ 0.01
NUP58-206ENST00000463407 LMTK3Q96Q04 1460 aa15.14■□□□□ 0.01
NUP58-206ENST00000463407 TTC21AQ8NDW8 1320 aa15.13■□□□□ 0.01
NUP58-206ENST00000463407 ATP5J2-PTCD1G3V325 749 aa15.13■□□□□ 0.01
NUP58-206ENST00000463407 K7ELQ4 463 aaPredicted RBP15.13■□□□□ 0.01
NUP58-206ENST00000463407 CDC5LQ99459 802 aaKnown RBP15.13■□□□□ 0.01
NUP58-206ENST00000463407 CABLES1Q8TDN4 633 aa15.13■□□□□ 0.01
NUP58-206ENST00000463407 SSH1Q8WYL5 1049 aa15.13■□□□□ 0.01
NUP58-206ENST00000463407 PPIP5K1Q6PFW1 1433 aa15.13■□□□□ 0.01
NUP58-206ENST00000463407 RNF214Q8ND24 703 aa15.13■□□□□ 0.01
NUP58-206ENST00000463407 CCDC8Q9H0W5 538 aaPredicted RBP15.13■□□□□ 0.01
NUP58-206ENST00000463407 SSBP05455 408 aaKnown RBP eCLIP15.13■□□□□ 0.01
NUP58-206ENST00000463407 SNRPA1P09661 255 aaKnown RBP15.13■□□□□ 0.01
NUP58-206ENST00000463407 MATR3P43243 847 aaKnown RBP eCLIP15.13■□□□□ 0.01
NUP58-206ENST00000463407 GPS2Q13227 327 aa15.13■□□□□ 0.01
NUP58-206ENST00000463407 LRRFIP2Q9Y608 721 aaKnown RBP15.13■□□□□ 0.01
NUP58-206ENST00000463407 TRAK2O60296 914 aa15.13■□□□□ 0.01
NUP58-206ENST00000463407 SMC2O95347 1197 aa15.13■□□□□ 0.01
NUP58-206ENST00000463407 RARSP54136 660 aaKnown RBP15.13■□□□□ 0.01
NUP58-206ENST00000463407 NBPF6Q5VWK0 638 aa15.13■□□□□ 0.01
NUP58-206ENST00000463407 NBPF5PQ86XG9 351 aaPredicted RBP15.13■□□□□ 0.01
NUP58-206ENST00000463407 PAF1Q8N7H5 531 aa15.13■□□□□ 0.01
NUP58-206ENST00000463407 NBPF4Q96M43 638 aa15.13■□□□□ 0.01
NUP58-206ENST00000463407 SEC63Q9UGP8 760 aaKnown RBP15.13■□□□□ 0.01
NUP58-206ENST00000463407 MBD3O95983 291 aa15.12■□□□□ 0.01
NUP58-206ENST00000463407 LARP1BQ659C4 914 aaKnown RBP15.12■□□□□ 0.01
NUP58-206ENST00000463407 NAPBQ9H115 298 aa15.12■□□□□ 0.01
NUP58-206ENST00000463407 MX1P20591 662 aa15.12■□□□□ 0.01
NUP58-206ENST00000463407 FBLN1P23142 703 aa15.12■□□□□ 0.01
NUP58-206ENST00000463407 ME1P48163 572 aa15.12■□□□□ 0.01
NUP58-206ENST00000463407 DDB1Q16531 1140 aa15.12■□□□□ 0.01
NUP58-206ENST00000463407 ZNF444Q8N0Y2 327 aaPredicted RBP15.12■□□□□ 0.01
NUP58-206ENST00000463407 TSPY26PQ9H489 355 aa15.12■□□□□ 0.01
NUP58-206ENST00000463407 GLRX3O76003 335 aaKnown RBP15.12■□□□□ 0.01
NUP58-206ENST00000463407 FAM13BQ9NYF5 915 aa15.12■□□□□ 0.01
NUP58-206ENST00000463407 WASF1Q92558 559 aa15.11■□□□□ 0.01
NUP58-206ENST00000463407 NASPP49321 788 aaPredicted RBP15.11■□□□□ 0.01
NUP58-206ENST00000463407 CHMP4BP1P59074 171 aa15.11■□□□□ 0.01
NUP58-206ENST00000463407 TTLL5Q6EMB2 1281 aa15.11■□□□□ 0.01
NUP58-206ENST00000463407 WDR78Q5VTH9 848 aa15.11■□□□□ 0.01
NUP58-206ENST00000463407 FAM83GA6ND36 823 aa15.11■□□□□ 0.01
NUP58-206ENST00000463407 FLIIQ13045 1269 aa15.1■□□□□ 0.01
NUP58-206ENST00000463407 NUP153P49790 1475 aaKnown RBP15.1■□□□□ 0.01
NUP58-206ENST00000463407 PIP4K2AP48426 406 aaPredicted RBP15.1■□□□□ 0.01
NUP58-206ENST00000463407 U3KPZ7 1027 aaPredicted RBP15.1■□□□□ 0.01
NUP58-206ENST00000463407 STIM1Q13586 685 aa15.1■□□□□ 0.01
NUP58-206ENST00000463407 CCDC96Q2M329 555 aa15.1■□□□□ 0.01
NUP58-206ENST00000463407 PDCL3Q9H2J4 239 aa15.1■□□□□ 0.01
NUP58-206ENST00000463407 C19orf44Q9H6X5 657 aa15.1■□□□□ 0.01
NUP58-206ENST00000463407 CASTP20810 708 aaKnown RBP15.1■□□□□ 0.01
NUP58-206ENST00000463407 WDR33Q9C0J8 1336 aaKnown RBP15.1■□□□□ 0.01
NUP58-206ENST00000463407 ANKRD36BQ8N2N9 1353 aa15.09■□□□□ 0.01
NUP58-206ENST00000463407 ZSCAN31Q96LW9 406 aaPredicted RBP15.09■□□□□ 0.01
NUP58-206ENST00000463407 BACH2Q9BYV9 841 aa15.09■□□□□ 0.01
NUP58-206ENST00000463407 KIAA0556O60303 1618 aa15.09■□□□□ 0.01
NUP58-206ENST00000463407 LDHAL6AQ6ZMR3 332 aa15.09■□□□□ 0.01
NUP58-206ENST00000463407 TRIM5Q9C035 493 aa15.09■□□□□ 0.01
NUP58-206ENST00000463407 TANGO6Q9C0B7 1094 aa15.09■□□□□ 0.01
NUP58-206ENST00000463407 CCDC39Q9UFE4 941 aa15.09■□□□□ 0.01
NUP58-206ENST00000463407 ADAMTS12P58397 1594 aa15.09■□□□□ 0.01
NUP58-206ENST00000463407 RANBP6O60518 1105 aaKnown RBP15.09■□□□□ 0.01
NUP58-206ENST00000463407 BMP2KQ9NSY1 1161 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms