RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 ARHGAP27Q6ZUM4 889 aa19.16■□□□□ 0.66
PABPC4-208ENST00000461578 EYA1Q99502 592 aa19.16■□□□□ 0.66
PABPC4-208ENST00000461578 TOMM70O94826 608 aa19.15■□□□□ 0.66
PABPC4-208ENST00000461578 CARD14Q9BXL6 1004 aa19.15■□□□□ 0.66
PABPC4-208ENST00000461578 NMRK2Q9NPI5 230 aa19.15■□□□□ 0.66
PABPC4-208ENST00000461578 ATG3Q9NT62 314 aa19.15■□□□□ 0.66
PABPC4-208ENST00000461578 PHKG2P15735 406 aa19.14■□□□□ 0.65
PABPC4-208ENST00000461578 TGFB2P61812 414 aa19.14■□□□□ 0.65
PABPC4-208ENST00000461578 TRAPPC3LQ5T215 181 aa19.14■□□□□ 0.65
PABPC4-208ENST00000461578 IFNL2Q8IZJ0 200 aa19.14■□□□□ 0.65
PABPC4-208ENST00000461578 RTCBQ9Y3I0 505 aaKnown RBP19.14■□□□□ 0.65
PABPC4-208ENST00000461578 DPEP1P16444 411 aa19.13■□□□□ 0.65
PABPC4-208ENST00000461578 DNAJC5GQ8N7S2 189 aa19.13■□□□□ 0.65
PABPC4-208ENST00000461578 RBM42Q9BTD8 480 aaKnown RBP19.13■□□□□ 0.65
PABPC4-208ENST00000461578 C10orf71Q711Q0 1435 aa19.13■□□□□ 0.65
PABPC4-208ENST00000461578 ANKRD26Q9UPS8 1709 aa19.12■□□□□ 0.65
PABPC4-208ENST00000461578 FCHSD2O94868 740 aa19.12■□□□□ 0.65
PABPC4-208ENST00000461578 WASHC2AQ641Q2 1341 aa19.11■□□□□ 0.65
PABPC4-208ENST00000461578 CDCA8Q53HL2 280 aa19.11■□□□□ 0.65
PABPC4-208ENST00000461578 NLGN1Q8N2Q7 840 aa19.11■□□□□ 0.65
PABPC4-208ENST00000461578 CCDC87Q9NVE4 849 aa19.11■□□□□ 0.65
PABPC4-208ENST00000461578 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.11■□□□□ 0.65
PABPC4-208ENST00000461578 KDRP35968 1356 aa19.1■□□□□ 0.65
PABPC4-208ENST00000461578 ARHGEF1Q92888 912 aaKnown RBP19.1■□□□□ 0.65
PABPC4-208ENST00000461578 SLC4A9Q96Q91 983 aa19.1■□□□□ 0.65
PABPC4-208ENST00000461578 C4AP0C0L4 1744 aa19.1■□□□□ 0.65
PABPC4-208ENST00000461578 WDR90Q96KV7 1748 aa19.09■□□□□ 0.65
PABPC4-208ENST00000461578 HTRA3P83110 453 aa19.09■□□□□ 0.65
PABPC4-208ENST00000461578 PARP3Q9Y6F1 533 aa19.09■□□□□ 0.65
PABPC4-208ENST00000461578 BRCA1P38398 1863 aaKnown RBP19.08■□□□□ 0.65
PABPC4-208ENST00000461578 GYS1P13807 737 aa19.08■□□□□ 0.64
PABPC4-208ENST00000461578 RFC4P35249 363 aa19.08■□□□□ 0.64
PABPC4-208ENST00000461578 C9orf131Q5VYM1 1079 aa19.08■□□□□ 0.64
PABPC4-208ENST00000461578 C16orf71Q8IYS4 520 aaPredicted RBP19.08■□□□□ 0.64
PABPC4-208ENST00000461578 POLKQ9UBT6 870 aa19.07■□□□□ 0.64
PABPC4-208ENST00000461578 COL5A3P25940 1745 aaPredicted RBP19.06■□□□□ 0.64
PABPC4-208ENST00000461578 TNNT2P45379 298 aaPredicted RBP19.06■□□□□ 0.64
PABPC4-208ENST00000461578 EIF4A2Q14240 407 aaKnown RBP19.06■□□□□ 0.64
PABPC4-208ENST00000461578 RPS6KA4O75676 772 aa19.05■□□□□ 0.64
PABPC4-208ENST00000461578 ADRA2BP18089 450 aa19.05■□□□□ 0.64
PABPC4-208ENST00000461578 KCNA3P22001 575 aa19.05■□□□□ 0.64
PABPC4-208ENST00000461578 RC3H1Q5TC82 1133 aaKnown RBP19.05■□□□□ 0.64
PABPC4-208ENST00000461578 RBM46Q8TBY0 533 aaKnown RBP19.05■□□□□ 0.64
PABPC4-208ENST00000461578 KCPQ6ZWJ8 1503 aa19.05■□□□□ 0.64
PABPC4-208ENST00000461578 CNTNAP4Q9C0A0 1308 aa19.04■□□□□ 0.64
PABPC4-208ENST00000461578 ARFGEF1Q9Y6D6 1849 aa19.04■□□□□ 0.64
PABPC4-208ENST00000461578 ZNF831Q5JPB2 1677 aa19.04■□□□□ 0.64
PABPC4-208ENST00000461578 MYH14Q7Z406 1995 aaKnown RBP19.03■□□□□ 0.64
PABPC4-208ENST00000461578 ERVV-2B6SEH9 535 aa19.03■□□□□ 0.64
PABPC4-208ENST00000461578 PIM2Q9P1W9 311 aa19.03■□□□□ 0.64
PABPC4-208ENST00000461578 PLEKHG2Q9H7P9 1386 aa19.03■□□□□ 0.64
PABPC4-208ENST00000461578 KLRG1Q96E93 195 aa19.02■□□□□ 0.64
PABPC4-208ENST00000461578 DCAF5Q96JK2 942 aa19.02■□□□□ 0.64
PABPC4-208ENST00000461578 RNF181Q9P0P0 153 aa19.02■□□□□ 0.64
PABPC4-208ENST00000461578 SRP68Q9UHB9 627 aaKnown RBP19.02■□□□□ 0.64
PABPC4-208ENST00000461578 PTCD1O75127 700 aaKnown RBP19.01■□□□□ 0.63
PABPC4-208ENST00000461578 CABP4P57796 275 aa19.01■□□□□ 0.63
PABPC4-208ENST00000461578 COL13A1Q5TAT6 717 aaPredicted RBP19.01■□□□□ 0.63
PABPC4-208ENST00000461578 ZNF530Q6P9A1 599 aaPredicted RBP19.01■□□□□ 0.63
PABPC4-208ENST00000461578 POLR3GLQ9BT43 218 aa19.01■□□□□ 0.63
PABPC4-208ENST00000461578 KDM6AO15550 1401 aaPredicted RBP19■□□□□ 0.63
PABPC4-208ENST00000461578 CAPN15O75808 1086 aa19■□□□□ 0.63
PABPC4-208ENST00000461578 HSP90AB1P08238 724 aaKnown RBP19■□□□□ 0.63
PABPC4-208ENST00000461578 CHRNA5P30532 468 aa19■□□□□ 0.63
PABPC4-208ENST00000461578 DALRD3Q5D0E6 543 aaKnown RBP19■□□□□ 0.63
PABPC4-208ENST00000461578 RRAGCQ9HB90 399 aa19■□□□□ 0.63
PABPC4-208ENST00000461578 KDM2BQ8NHM5 1336 aa19■□□□□ 0.63
PABPC4-208ENST00000461578 CRKLP46109 303 aaKnown RBP18.99■□□□□ 0.63
PABPC4-208ENST00000461578 DDR1Q08345 913 aa18.99■□□□□ 0.63
PABPC4-208ENST00000461578 FSTL1Q12841 308 aa18.99■□□□□ 0.63
PABPC4-208ENST00000461578 FKBP8Q14318 412 aa18.99■□□□□ 0.63
PABPC4-208ENST00000461578 PLEKHO1Q53GL0 409 aaPredicted RBP18.99■□□□□ 0.63
PABPC4-208ENST00000461578 USP42Q9H9J4 1324 aaKnown RBP18.97■□□□□ 0.63
PABPC4-208ENST00000461578 MTHFSP49914 203 aa18.96■□□□□ 0.63
PABPC4-208ENST00000461578 JMYQ8N9B5 988 aa18.96■□□□□ 0.63
PABPC4-208ENST00000461578 TNRC6CQ9HCJ0 1690 aaKnown RBP18.95■□□□□ 0.62
PABPC4-208ENST00000461578 SBF1O95248 1867 aa18.95■□□□□ 0.62
PABPC4-208ENST00000461578 TJP1Q07157 1748 aa18.94■□□□□ 0.62
PABPC4-208ENST00000461578 RASSF7Q02833 373 aa18.94■□□□□ 0.62
PABPC4-208ENST00000461578 C1orf141Q5JVX7 400 aa18.94■□□□□ 0.62
PABPC4-208ENST00000461578 NFATC2IPQ8NCF5 419 aa18.94■□□□□ 0.62
PABPC4-208ENST00000461578 POLRMTO00411 1230 aaKnown RBP18.93■□□□□ 0.62
PABPC4-208ENST00000461578 AMOTQ4VCS5 1084 aa18.93■□□□□ 0.62
PABPC4-208ENST00000461578 AEBP1Q8IUX7 1158 aa18.93■□□□□ 0.62
PABPC4-208ENST00000461578 TNS4Q8IZW8 715 aa18.92■□□□□ 0.62
PABPC4-208ENST00000461578 SMC1BQ8NDV3 1235 aa18.92■□□□□ 0.62
PABPC4-208ENST00000461578 USPL1Q5W0Q7 1092 aa18.91■□□□□ 0.62
PABPC4-208ENST00000461578 ADAMTS7Q9UKP4 1686 aa18.9■□□□□ 0.62
PABPC4-208ENST00000461578 ZPR1O75312 459 aa18.9■□□□□ 0.62
PABPC4-208ENST00000461578 TM4SF1P30408 202 aa18.9■□□□□ 0.62
PABPC4-208ENST00000461578 INTS5Q6P9B9 1019 aaKnown RBP18.9■□□□□ 0.62
PABPC4-208ENST00000461578 DNAJC10Q8IXB1 793 aa18.89■□□□□ 0.61
PABPC4-208ENST00000461578 AFDNP55196 1824 aaKnown RBP18.87■□□□□ 0.61
PABPC4-208ENST00000461578 SULT6B1Q6IMI4 303 aa18.87■□□□□ 0.61
PABPC4-208ENST00000461578 SCN11AQ9UI33 1791 aa18.86■□□□□ 0.61
PABPC4-208ENST00000461578 PRELPP51888 382 aa18.86■□□□□ 0.61
PABPC4-208ENST00000461578 SOS1Q07889 1333 aaPredicted RBP18.85■□□□□ 0.61
PABPC4-208ENST00000461578 HSPA1AP0DMV8 641 aaKnown RBP18.85■□□□□ 0.61
PABPC4-208ENST00000461578 HSPA1BP0DMV9 641 aaKnown RBP18.85■□□□□ 0.61
PABPC4-208ENST00000461578 LMNB1P20700 586 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms