RNA–Protein interactions for RNA: ENST00000461217.1

COL16A1-206, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-206ENST00000461217 YBX3P16989 372 aaKnown RBP eCLIP20.63■□□□□ 0.89
COL16A1-206ENST00000461217 ITPK1Q13572 414 aa20.63■□□□□ 0.89
COL16A1-206ENST00000461217 ZNF530Q6P9A1 599 aaPredicted RBP20.63■□□□□ 0.89
COL16A1-206ENST00000461217 ATG3Q9NT62 314 aa20.63■□□□□ 0.89
COL16A1-206ENST00000461217 CD2APQ9Y5K6 639 aa20.63■□□□□ 0.89
COL16A1-206ENST00000461217 DCAF5Q96JK2 942 aa20.62■□□□□ 0.89
COL16A1-206ENST00000461217 ERVV-2B6SEH9 535 aa20.61■□□□□ 0.89
COL16A1-206ENST00000461217 AMOTQ4VCS5 1084 aa20.61■□□□□ 0.89
COL16A1-206ENST00000461217 RBM42Q9BTD8 480 aaKnown RBP20.61■□□□□ 0.89
COL16A1-206ENST00000461217 C1orf141Q5JVX7 400 aa20.6■□□□□ 0.89
COL16A1-206ENST00000461217 AEBP1Q8IUX7 1158 aa20.6■□□□□ 0.89
COL16A1-206ENST00000461217 CABP4P57796 275 aa20.59■□□□□ 0.89
COL16A1-206ENST00000461217 KDM6AO15550 1401 aaPredicted RBP20.59■□□□□ 0.89
COL16A1-206ENST00000461217 KDRP35968 1356 aa20.59■□□□□ 0.89
COL16A1-206ENST00000461217 SULT6B1Q6IMI4 303 aa20.58■□□□□ 0.89
COL16A1-206ENST00000461217 MTHFSP49914 203 aa20.57■□□□□ 0.88
COL16A1-206ENST00000461217 RTCBQ9Y3I0 505 aaKnown RBP20.56■□□□□ 0.88
COL16A1-206ENST00000461217 KIF7Q2M1P5 1343 aa20.55■□□□□ 0.88
COL16A1-206ENST00000461217 ZNF831Q5JPB2 1677 aa20.55■□□□□ 0.88
COL16A1-206ENST00000461217 GIGYF1O75420 1035 aaPredicted RBP20.55■□□□□ 0.88
COL16A1-206ENST00000461217 WWC3Q9ULE0 1092 aa20.55■□□□□ 0.88
COL16A1-206ENST00000461217 C1QTNF8P60827 252 aa20.54■□□□□ 0.88
COL16A1-206ENST00000461217 TRAPPC3LQ5T215 181 aa20.54■□□□□ 0.88
COL16A1-206ENST00000461217 COL5A3P25940 1745 aaPredicted RBP20.53■□□□□ 0.88
COL16A1-206ENST00000461217 IL13P35225 146 aa20.53■□□□□ 0.88
COL16A1-206ENST00000461217 AMER1Q5JTC6 1135 aaPredicted RBP20.53■□□□□ 0.88
COL16A1-206ENST00000461217 SLC4A9Q96Q91 983 aa20.53■□□□□ 0.88
COL16A1-206ENST00000461217 UTRNP46939 3433 aa20.52■□□□□ 0.88
COL16A1-206ENST00000461217 SENP3-EIF4A1A0A087X0R7 540 aa20.52■□□□□ 0.88
COL16A1-206ENST00000461217 PTCD1O75127 700 aaKnown RBP20.52■□□□□ 0.88
COL16A1-206ENST00000461217 MMP10P09238 476 aa20.52■□□□□ 0.88
COL16A1-206ENST00000461217 CNTNAP4Q9C0A0 1308 aa20.51■□□□□ 0.87
COL16A1-206ENST00000461217 RFC4P35249 363 aa20.5■□□□□ 0.87
COL16A1-206ENST00000461217 RC3H1Q5TC82 1133 aaKnown RBP20.5■□□□□ 0.87
COL16A1-206ENST00000461217 NFATC2IPQ8NCF5 419 aa20.5■□□□□ 0.87
COL16A1-206ENST00000461217 CICQ96RK0 1608 aaPredicted RBP20.49■□□□□ 0.87
COL16A1-206ENST00000461217 ADRA2BP18089 450 aa20.49■□□□□ 0.87
COL16A1-206ENST00000461217 CC2D1BQ5T0F9 858 aaKnown RBP20.49■□□□□ 0.87
COL16A1-206ENST00000461217 NLGN1Q8N2Q7 840 aa20.49■□□□□ 0.87
COL16A1-206ENST00000461217 ARHGEF1Q92888 912 aaKnown RBP20.49■□□□□ 0.87
COL16A1-206ENST00000461217 ATP10DQ9P241 1426 aa20.48■□□□□ 0.87
COL16A1-206ENST00000461217 RPS6KA4O75676 772 aa20.48■□□□□ 0.87
COL16A1-206ENST00000461217 SCN11AQ9UI33 1791 aa20.47■□□□□ 0.87
COL16A1-206ENST00000461217 HMOX1P09601 288 aa20.47■□□□□ 0.87
COL16A1-206ENST00000461217 AKAP4Q5JQC9 854 aa20.47■□□□□ 0.87
COL16A1-206ENST00000461217 C4AP0C0L4 1744 aa20.47■□□□□ 0.87
COL16A1-206ENST00000461217 CNGB1Q14028 1251 aaPredicted RBP20.46■□□□□ 0.87
COL16A1-206ENST00000461217 TJP1Q07157 1748 aa20.45■□□□□ 0.86
COL16A1-206ENST00000461217 CRKLP46109 303 aaKnown RBP20.45■□□□□ 0.86
COL16A1-206ENST00000461217 PARP3Q9Y6F1 533 aa20.45■□□□□ 0.86
COL16A1-206ENST00000461217 PXDNLA1KZ92 1463 aa20.44■□□□□ 0.86
COL16A1-206ENST00000461217 DIAPH1O60610 1272 aaKnown RBP20.44■□□□□ 0.86
COL16A1-206ENST00000461217 GYS1P13807 737 aa20.44■□□□□ 0.86
COL16A1-206ENST00000461217 CCDC87Q9NVE4 849 aa20.44■□□□□ 0.86
COL16A1-206ENST00000461217 ZNF526Q8TF50 670 aaPredicted RBP20.43■□□□□ 0.86
COL16A1-206ENST00000461217 SLC52A2Q9HAB3 445 aa20.43■□□□□ 0.86
COL16A1-206ENST00000461217 GPBP1L1Q9HC44 474 aaPredicted RBP20.43■□□□□ 0.86
COL16A1-206ENST00000461217 C10orf71Q711Q0 1435 aa20.43■□□□□ 0.86
COL16A1-206ENST00000461217 KIF13BQ9NQT8 1826 aa20.42■□□□□ 0.86
COL16A1-206ENST00000461217 PER1O15534 1290 aaPredicted RBP20.42■□□□□ 0.86
COL16A1-206ENST00000461217 N4BP2Q86UW6 1770 aaPredicted RBP20.41■□□□□ 0.86
COL16A1-206ENST00000461217 TGFB2P61812 414 aa20.41■□□□□ 0.86
COL16A1-206ENST00000461217 LGR6Q9HBX8 967 aa20.41■□□□□ 0.86
COL16A1-206ENST00000461217 KIAA1551Q9HCM1 1747 aa20.41■□□□□ 0.86
COL16A1-206ENST00000461217 MYH14Q7Z406 1995 aaKnown RBP20.41■□□□□ 0.86
COL16A1-206ENST00000461217 A0A0G2JLW4 131 aa20.4■□□□□ 0.86
COL16A1-206ENST00000461217 RNMTO43148 476 aaKnown RBP20.4■□□□□ 0.86
COL16A1-206ENST00000461217 ADCY9O60503 1353 aa20.4■□□□□ 0.86
COL16A1-206ENST00000461217 MRC1P22897 1456 aa20.4■□□□□ 0.86
COL16A1-206ENST00000461217 SRP68Q9UHB9 627 aaKnown RBP20.4■□□□□ 0.86
COL16A1-206ENST00000461217 BCS1LQ9Y276 419 aa20.4■□□□□ 0.86
COL16A1-206ENST00000461217 GOLGB1Q14789 3259 aaKnown RBP20.4■□□□□ 0.86
COL16A1-206ENST00000461217 USP42Q9H9J4 1324 aaKnown RBP20.39■□□□□ 0.85
COL16A1-206ENST00000461217 MTHFSDQ2M296 383 aaKnown RBP20.39■□□□□ 0.85
COL16A1-206ENST00000461217 DNAJC10Q8IXB1 793 aa20.39■□□□□ 0.85
COL16A1-206ENST00000461217 VIRMAQ69YN4 1812 aaKnown RBP20.39■□□□□ 0.85
COL16A1-206ENST00000461217 U2SURPO15042 1029 aaKnown RBP20.38■□□□□ 0.85
COL16A1-206ENST00000461217 SLC39A6Q13433 755 aa20.38■□□□□ 0.85
COL16A1-206ENST00000461217 DPEP1P16444 411 aa20.37■□□□□ 0.85
COL16A1-206ENST00000461217 FKBP8Q14318 412 aa20.36■□□□□ 0.85
COL16A1-206ENST00000461217 INTS5Q6P9B9 1019 aaKnown RBP20.36■□□□□ 0.85
COL16A1-206ENST00000461217 NPC1L1Q9UHC9 1359 aa20.35■□□□□ 0.85
COL16A1-206ENST00000461217 ZPR1O75312 459 aa20.35■□□□□ 0.85
COL16A1-206ENST00000461217 FCHSD2O94868 740 aa20.35■□□□□ 0.85
COL16A1-206ENST00000461217 COL3A1P02461 1466 aaPredicted RBP20.35■□□□□ 0.85
COL16A1-206ENST00000461217 KCPQ6ZWJ8 1503 aa20.34■□□□□ 0.85
COL16A1-206ENST00000461217 ARHGAP27Q6ZUM4 889 aa20.34■□□□□ 0.85
COL16A1-206ENST00000461217 ADAMTS7Q9UKP4 1686 aa20.34■□□□□ 0.85
COL16A1-206ENST00000461217 SOS1Q07889 1333 aaPredicted RBP20.33■□□□□ 0.85
COL16A1-206ENST00000461217 DDR1Q08345 913 aa20.33■□□□□ 0.85
COL16A1-206ENST00000461217 TTC5Q8N0Z6 440 aa20.33■□□□□ 0.85
COL16A1-206ENST00000461217 CYP19A1P11511 503 aaPredicted RBP20.32■□□□□ 0.84
COL16A1-206ENST00000461217 USPL1Q5W0Q7 1092 aa20.32■□□□□ 0.84
COL16A1-206ENST00000461217 COL15A1P39059 1388 aa20.32■□□□□ 0.84
COL16A1-206ENST00000461217 GAS2L2Q8NHY3 880 aa20.31■□□□□ 0.84
COL16A1-206ENST00000461217 ZBTB1Q9Y2K1 713 aa20.31■□□□□ 0.84
COL16A1-206ENST00000461217 TEFQ10587 303 aa20.3■□□□□ 0.84
COL16A1-206ENST00000461217 VSIG10Q8N0Z9 540 aa20.3■□□□□ 0.84
COL16A1-206ENST00000461217 CFAP53Q96M91 514 aa20.3■□□□□ 0.84
COL16A1-206ENST00000461217 PIM2Q9P1W9 311 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms