RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 COL3A1P02461 1466 aaPredicted RBP18.87■□□□□ 0.61
SSR4-206ENST00000460616 ABCC4O15439 1325 aa18.87■□□□□ 0.61
SSR4-206ENST00000460616 ZBTB7CA1YPR0 619 aa18.86■□□□□ 0.61
SSR4-206ENST00000460616 PRIMPOLQ96LW4 560 aa18.86■□□□□ 0.61
SSR4-206ENST00000460616 AKAP12Q02952 1782 aa18.86■□□□□ 0.61
SSR4-206ENST00000460616 HMGN5P82970 282 aaKnown RBP18.85■□□□□ 0.61
SSR4-206ENST00000460616 TSPYL6Q8N831 410 aa18.85■□□□□ 0.61
SSR4-206ENST00000460616 CCDC61Q9Y6R9 512 aa18.85■□□□□ 0.61
SSR4-206ENST00000460616 ELL2O00472 640 aaPredicted RBP18.85■□□□□ 0.61
SSR4-206ENST00000460616 FCHSD2O94868 740 aa18.85■□□□□ 0.61
SSR4-206ENST00000460616 C19orf44Q9H6X5 657 aa18.85■□□□□ 0.61
SSR4-206ENST00000460616 SDSP20132 328 aa18.84■□□□□ 0.61
SSR4-206ENST00000460616 JARID2Q92833 1246 aaPredicted RBP18.84■□□□□ 0.61
SSR4-206ENST00000460616 REC8O95072 547 aa18.84■□□□□ 0.61
SSR4-206ENST00000460616 SYAP1Q96A49 352 aaPredicted RBP18.84■□□□□ 0.61
SSR4-206ENST00000460616 MON2Q7Z3U7 1717 aa18.83■□□□□ 0.61
SSR4-206ENST00000460616 NOLC1Q14978 699 aaKnown RBP eCLIP18.83■□□□□ 0.6
SSR4-206ENST00000460616 ANKARQ7Z5J8 1434 aa18.83■□□□□ 0.6
SSR4-206ENST00000460616 ZNF710Q8N1W2 664 aa18.83■□□□□ 0.6
SSR4-206ENST00000460616 TSC1Q92574 1164 aa18.83■□□□□ 0.6
SSR4-206ENST00000460616 FYB1O15117 783 aa18.82■□□□□ 0.6
SSR4-206ENST00000460616 PIBF1Q8WXW3 757 aa18.82■□□□□ 0.6
SSR4-206ENST00000460616 MSH6P52701 1360 aa18.82■□□□□ 0.6
SSR4-206ENST00000460616 A0A0U1RQG5 324 aaPredicted RBP18.82■□□□□ 0.6
SSR4-206ENST00000460616 PLEKHG5O94827 1062 aa18.82■□□□□ 0.6
SSR4-206ENST00000460616 GTF2F1P35269 517 aaKnown RBP eCLIP18.82■□□□□ 0.6
SSR4-206ENST00000460616 API5Q9BZZ5 524 aaKnown RBP18.82■□□□□ 0.6
SSR4-206ENST00000460616 MST1RQ04912 1400 aa18.82■□□□□ 0.6
SSR4-206ENST00000460616 PRKAR2BP31323 418 aa18.81■□□□□ 0.6
SSR4-206ENST00000460616 OTUD7AQ8TE49 926 aaPredicted RBP18.81■□□□□ 0.6
SSR4-206ENST00000460616 ZNF830Q96NB3 372 aaPredicted RBP18.81■□□□□ 0.6
SSR4-206ENST00000460616 BRD1O95696 1058 aa18.81■□□□□ 0.6
SSR4-206ENST00000460616 CBX1P83916 185 aa18.81■□□□□ 0.6
SSR4-206ENST00000460616 MPNDQ8N594 471 aa18.81■□□□□ 0.6
SSR4-206ENST00000460616 ORAI2Q96SN7 254 aa18.81■□□□□ 0.6
SSR4-206ENST00000460616 THUMPD2Q9BTF0 503 aaKnown RBP18.81■□□□□ 0.6
SSR4-206ENST00000460616 CPSF1Q10570 1443 aaKnown RBP18.81■□□□□ 0.6
SSR4-206ENST00000460616 TMX3Q96JJ7 454 aa18.8■□□□□ 0.6
SSR4-206ENST00000460616 PHF14O94880 888 aa18.8■□□□□ 0.6
SSR4-206ENST00000460616 NEK4P51957 841 aa18.8■□□□□ 0.6
SSR4-206ENST00000460616 GNAI1P63096 354 aa18.8■□□□□ 0.6
SSR4-206ENST00000460616 ACEP12821 1306 aa18.8■□□□□ 0.6
SSR4-206ENST00000460616 DCCP43146 1447 aa18.8■□□□□ 0.6
SSR4-206ENST00000460616 C1orf167Q5SNV9 1468 aa18.8■□□□□ 0.6
SSR4-206ENST00000460616 ERC2O15083 957 aa18.79■□□□□ 0.6
SSR4-206ENST00000460616 ATF3P18847 181 aa18.79■□□□□ 0.6
SSR4-206ENST00000460616 GTPBP4Q9BZE4 634 aaKnown RBP18.79■□□□□ 0.6
SSR4-206ENST00000460616 UVSSAQ2YD98 709 aa18.79■□□□□ 0.6
SSR4-206ENST00000460616 TWISTNBQ3B726 338 aaPredicted RBP18.79■□□□□ 0.6
SSR4-206ENST00000460616 ESCO1Q5FWF5 840 aa18.79■□□□□ 0.6
SSR4-206ENST00000460616 NRKQ7Z2Y5 1582 aa18.79■□□□□ 0.6
SSR4-206ENST00000460616 PPP4R3BQ5MIZ7 849 aa18.78■□□□□ 0.6
SSR4-206ENST00000460616 FAM184AQ8NB25 1140 aa18.78■□□□□ 0.6
SSR4-206ENST00000460616 TERF2IPQ9NYB0 399 aa18.78■□□□□ 0.6
SSR4-206ENST00000460616 KIF3AQ9Y496 699 aa18.78■□□□□ 0.6
SSR4-206ENST00000460616 PNPLA6Q8IY17 1366 aa18.78■□□□□ 0.6
SSR4-206ENST00000460616 MBIPQ9NS73 344 aa18.78■□□□□ 0.6
SSR4-206ENST00000460616 IFT57Q9NWB7 429 aa18.78■□□□□ 0.6
SSR4-206ENST00000460616 PLEKHG3A1L390 1219 aa18.77■□□□□ 0.6
SSR4-206ENST00000460616 NFE2L2Q16236 605 aa18.77■□□□□ 0.6
SSR4-206ENST00000460616 HDGFL2Q7Z4V5 671 aaPredicted RBP18.77■□□□□ 0.6
SSR4-206ENST00000460616 KIF20BQ96Q89 1820 aa18.77■□□□□ 0.6
SSR4-206ENST00000460616 MCM2P49736 904 aa18.77■□□□□ 0.59
SSR4-206ENST00000460616 ANKRD44Q8N8A2 993 aa18.77■□□□□ 0.59
SSR4-206ENST00000460616 PHACTR3Q96KR7 559 aa18.77■□□□□ 0.59
SSR4-206ENST00000460616 APBB1O00213 710 aa18.76■□□□□ 0.59
SSR4-206ENST00000460616 TTC12Q9H892 705 aaPredicted RBP18.76■□□□□ 0.59
SSR4-206ENST00000460616 KIF24Q5T7B8 1368 aa18.76■□□□□ 0.59
SSR4-206ENST00000460616 SMARCA5O60264 1052 aaPredicted RBP18.76■□□□□ 0.59
SSR4-206ENST00000460616 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.76■□□□□ 0.59
SSR4-206ENST00000460616 PHF8Q9UPP1 1060 aa18.76■□□□□ 0.59
SSR4-206ENST00000460616 ATP2B3Q16720 1220 aa18.75■□□□□ 0.59
SSR4-206ENST00000460616 CADPS2Q86UW7 1296 aa18.75■□□□□ 0.59
SSR4-206ENST00000460616 RPAP2Q8IXW5 612 aaPredicted RBP18.75■□□□□ 0.59
SSR4-206ENST00000460616 USP25Q9UHP3 1055 aa18.75■□□□□ 0.59
SSR4-206ENST00000460616 C17orf53Q8N3J3 647 aaPredicted RBP18.75■□□□□ 0.59
SSR4-206ENST00000460616 C8orf58Q8NAV2 365 aa18.75■□□□□ 0.59
SSR4-206ENST00000460616 NGDNQ8NEJ9 315 aaKnown RBP18.75■□□□□ 0.59
SSR4-206ENST00000460616 FAM177BA6PVY3 158 aa18.74■□□□□ 0.59
SSR4-206ENST00000460616 GADD45BO75293 160 aaPredicted RBP18.74■□□□□ 0.59
SSR4-206ENST00000460616 KIF20AO95235 890 aa18.74■□□□□ 0.59
SSR4-206ENST00000460616 ADCY5O95622 1261 aa18.74■□□□□ 0.59
SSR4-206ENST00000460616 ZNF853P0CG23 659 aa18.74■□□□□ 0.59
SSR4-206ENST00000460616 USP6P35125 1406 aa18.74■□□□□ 0.59
SSR4-206ENST00000460616 CUL4AQ13619 759 aa18.74■□□□□ 0.59
SSR4-206ENST00000460616 FKBP5Q13451 457 aaPredicted RBP18.74■□□□□ 0.59
SSR4-206ENST00000460616 FOXD4L6Q3SYB3 417 aaPredicted RBP18.74■□□□□ 0.59
SSR4-206ENST00000460616 FOXD4L3Q6VB84 417 aaPredicted RBP18.74■□□□□ 0.59
SSR4-206ENST00000460616 DDX17Q92841 729 aaKnown RBP18.74■□□□□ 0.59
SSR4-206ENST00000460616 SPTLC3Q9NUV7 552 aa18.74■□□□□ 0.59
SSR4-206ENST00000460616 HMOX1P09601 288 aa18.73■□□□□ 0.59
SSR4-206ENST00000460616 USP48Q86UV5 1035 aa18.73■□□□□ 0.59
SSR4-206ENST00000460616 INTS4Q96HW7 963 aaKnown RBP18.73■□□□□ 0.59
SSR4-206ENST00000460616 GDPD2Q9HCC8 539 aa18.73■□□□□ 0.59
SSR4-206ENST00000460616 BCL2L12Q9HB09 334 aa18.72■□□□□ 0.59
SSR4-206ENST00000460616 KIF1AQ12756 1690 aa18.72■□□□□ 0.59
SSR4-206ENST00000460616 EDC4Q6P2E9 1401 aaKnown RBP18.72■□□□□ 0.59
SSR4-206ENST00000460616 FOXO3O43524 673 aa18.72■□□□□ 0.59
SSR4-206ENST00000460616 LETM1O95202 739 aaPredicted RBP18.72■□□□□ 0.59
SSR4-206ENST00000460616 CEP85Q6P2H3 762 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms