RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 PTGDRQ13258 359 aa6.69□□□□□ -1.34
GTF3C3-208ENST00000455546 TMEM132AQ24JP5 1023 aa6.69□□□□□ -1.34
GTF3C3-208ENST00000455546 ZNF454Q8N9F8 522 aa6.69□□□□□ -1.34
GTF3C3-208ENST00000455546 CAMKK2Q96RR4 588 aa6.69□□□□□ -1.34
GTF3C3-208ENST00000455546 AXIN2Q9Y2T1 843 aa6.69□□□□□ -1.34
GTF3C3-208ENST00000455546 USP19O94966 1318 aa6.69□□□□□ -1.34
GTF3C3-208ENST00000455546 TRPM1Q7Z4N2 1603 aa6.68□□□□□ -1.34
GTF3C3-208ENST00000455546 RGPD1P0DJD0 1748 aa6.68□□□□□ -1.34
GTF3C3-208ENST00000455546 PDE4DQ08499 809 aa6.68□□□□□ -1.34
GTF3C3-208ENST00000455546 MAP2K5Q13163 448 aa6.68□□□□□ -1.34
GTF3C3-208ENST00000455546 HIC1Q14526 733 aa6.68□□□□□ -1.34
GTF3C3-208ENST00000455546 TOM1L2Q6ZVM7 507 aa6.68□□□□□ -1.34
GTF3C3-208ENST00000455546 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.68□□□□□ -1.34
GTF3C3-208ENST00000455546 ZNF710Q8N1W2 664 aa6.68□□□□□ -1.34
GTF3C3-208ENST00000455546 EPAS1Q99814 870 aa6.68□□□□□ -1.34
GTF3C3-208ENST00000455546 NRKQ7Z2Y5 1582 aa6.68□□□□□ -1.34
GTF3C3-208ENST00000455546 TTC21BQ7Z4L5 1316 aa6.68□□□□□ -1.34
GTF3C3-208ENST00000455546 USP6P35125 1406 aa6.67□□□□□ -1.34
GTF3C3-208ENST00000455546 TYW1BQ6NUM6 668 aa6.67□□□□□ -1.34
GTF3C3-208ENST00000455546 PTF1AQ7RTS3 328 aa6.67□□□□□ -1.34
GTF3C3-208ENST00000455546 TMC1Q8TDI8 760 aa6.67□□□□□ -1.34
GTF3C3-208ENST00000455546 CARD11Q9BXL7 1154 aa6.67□□□□□ -1.34
GTF3C3-208ENST00000455546 LMO7Q8WWI1 1683 aa6.67□□□□□ -1.34
GTF3C3-208ENST00000455546 CPDO75976 1380 aa6.67□□□□□ -1.34
GTF3C3-208ENST00000455546 TNS1Q9HBL0 1735 aaKnown RBP6.67□□□□□ -1.34
GTF3C3-208ENST00000455546 COL18A1P39060 1754 aa6.67□□□□□ -1.34
GTF3C3-208ENST00000455546 SRCAPQ6ZRS2 3230 aa6.66□□□□□ -1.34
GTF3C3-208ENST00000455546 CSB-PGBD3P0DP91 1061 aa6.66□□□□□ -1.34
GTF3C3-208ENST00000455546 FOSBP53539 338 aa6.66□□□□□ -1.34
GTF3C3-208ENST00000455546 GPR153Q6NV75 609 aa6.66□□□□□ -1.34
GTF3C3-208ENST00000455546 MAMSTRQ6ZN01 415 aa6.66□□□□□ -1.34
GTF3C3-208ENST00000455546 ARHGEF25Q86VW2 580 aa6.66□□□□□ -1.34
GTF3C3-208ENST00000455546 SLC12A5Q9H2X9 1139 aa6.66□□□□□ -1.34
GTF3C3-208ENST00000455546 KDM4CQ9H3R0 1056 aa6.66□□□□□ -1.34
GTF3C3-208ENST00000455546 NPDC1Q9NQX5 325 aaPredicted RBP6.66□□□□□ -1.34
GTF3C3-208ENST00000455546 THRAP3Q9Y2W1 955 aaKnown RBP6.66□□□□□ -1.34
GTF3C3-208ENST00000455546 AKAP12Q02952 1782 aa6.66□□□□□ -1.34
GTF3C3-208ENST00000455546 COL5A2P05997 1499 aaPredicted RBP6.66□□□□□ -1.34
GTF3C3-208ENST00000455546 PIK3C2AO00443 1686 aa6.65□□□□□ -1.34
GTF3C3-208ENST00000455546 SBF2Q86WG5 1849 aa6.65□□□□□ -1.34
GTF3C3-208ENST00000455546 IRF6O14896 467 aa6.65□□□□□ -1.34
GTF3C3-208ENST00000455546 RIMBP2O15034 1052 aa6.65□□□□□ -1.34
GTF3C3-208ENST00000455546 DDB1Q16531 1140 aa6.65□□□□□ -1.34
GTF3C3-208ENST00000455546 FAM161AQ3B820 660 aa6.65□□□□□ -1.34
GTF3C3-208ENST00000455546 NME9Q86XW9 330 aa6.65□□□□□ -1.34
GTF3C3-208ENST00000455546 LHX6Q9UPM6 363 aa6.65□□□□□ -1.34
GTF3C3-208ENST00000455546 GTF3C3Q9Y5Q9 886 aa6.65□□□□□ -1.34
GTF3C3-208ENST00000455546 AATKQ6ZMQ8 1374 aa6.65□□□□□ -1.35
GTF3C3-208ENST00000455546 KTN1Q86UP2 1357 aaKnown RBP6.65□□□□□ -1.35
GTF3C3-208ENST00000455546 CRB1P82279 1406 aa6.65□□□□□ -1.35
GTF3C3-208ENST00000455546 FBLN1P23142 703 aa6.64□□□□□ -1.35
GTF3C3-208ENST00000455546 MARCH10Q8NA82 808 aaPredicted RBP6.64□□□□□ -1.35
GTF3C3-208ENST00000455546 KCNH5Q8NCM2 988 aa6.64□□□□□ -1.35
GTF3C3-208ENST00000455546 ZDHHC16Q969W1 377 aa6.64□□□□□ -1.35
GTF3C3-208ENST00000455546 ADAM33Q9BZ11 813 aa6.64□□□□□ -1.35
GTF3C3-208ENST00000455546 BRD4O60885 1362 aaPredicted RBP6.64□□□□□ -1.35
GTF3C3-208ENST00000455546 CPSF1Q10570 1443 aaKnown RBP6.64□□□□□ -1.35
GTF3C3-208ENST00000455546 EXOC5O00471 708 aa6.63□□□□□ -1.35
GTF3C3-208ENST00000455546 SLIT3O75094 1523 aa6.63□□□□□ -1.35
GTF3C3-208ENST00000455546 NBPF14Q5TI25 921 aa6.63□□□□□ -1.35
GTF3C3-208ENST00000455546 WDR17Q8IZU2 1322 aa6.63□□□□□ -1.35
GTF3C3-208ENST00000455546 TTC21AQ8NDW8 1320 aa6.63□□□□□ -1.35
GTF3C3-208ENST00000455546 IL27Q8NEV9 243 aa6.63□□□□□ -1.35
GTF3C3-208ENST00000455546 FBXW7Q969H0 707 aa6.63□□□□□ -1.35
GTF3C3-208ENST00000455546 TONSLQ96HA7 1378 aa6.63□□□□□ -1.35
GTF3C3-208ENST00000455546 PARP4Q9UKK3 1724 aaKnown RBP6.63□□□□□ -1.35
GTF3C3-208ENST00000455546 DISP2A7MBM2 1401 aa6.62□□□□□ -1.35
GTF3C3-208ENST00000455546 ST20-MTHFSA0A0A6YYL1 179 aa6.62□□□□□ -1.35
GTF3C3-208ENST00000455546 KCNQ2O43526 872 aa6.62□□□□□ -1.35
GTF3C3-208ENST00000455546 TTLL12Q14166 644 aaPredicted RBP6.62□□□□□ -1.35
GTF3C3-208ENST00000455546 C6orf132Q5T0Z8 1188 aa6.62□□□□□ -1.35
GTF3C3-208ENST00000455546 PADI6Q6TGC4 694 aa6.62□□□□□ -1.35
GTF3C3-208ENST00000455546 PARP9Q8IXQ6 854 aa6.62□□□□□ -1.35
GTF3C3-208ENST00000455546 NLRP7Q8WX94 980 aa6.62□□□□□ -1.35
GTF3C3-208ENST00000455546 LTV1Q96GA3 475 aaPredicted RBP6.62□□□□□ -1.35
GTF3C3-208ENST00000455546 ACSBG1Q96GR2 724 aa6.62□□□□□ -1.35
GTF3C3-208ENST00000455546 CARD10Q9BWT7 1032 aa6.62□□□□□ -1.35
GTF3C3-208ENST00000455546 PDGFDQ9GZP0 370 aaPredicted RBP6.62□□□□□ -1.35
GTF3C3-208ENST00000455546 NLRP2Q9NX02 1062 aa6.62□□□□□ -1.35
GTF3C3-208ENST00000455546 NUP188Q5SRE5 1749 aa6.62□□□□□ -1.35
GTF3C3-208ENST00000455546 CD163L1Q9NR16 1453 aa6.61□□□□□ -1.35
GTF3C3-208ENST00000455546 SBNO2Q9Y2G9 1366 aa6.61□□□□□ -1.35
GTF3C3-208ENST00000455546 HDGFL2Q7Z4V5 671 aaPredicted RBP6.61□□□□□ -1.35
GTF3C3-208ENST00000455546 OTUD5Q96G74 571 aa6.61□□□□□ -1.35
GTF3C3-208ENST00000455546 ZSWIM6Q9HCJ5 1215 aa6.61□□□□□ -1.35
GTF3C3-208ENST00000455546 LTN1O94822 1766 aa6.61□□□□□ -1.35
GTF3C3-208ENST00000455546 MON2Q7Z3U7 1717 aa6.61□□□□□ -1.35
GTF3C3-208ENST00000455546 PEAK1Q9H792 1746 aa6.61□□□□□ -1.35
GTF3C3-208ENST00000455546 RREB1Q92766 1687 aa6.61□□□□□ -1.35
GTF3C3-208ENST00000455546 LRRC37A3O60309 1634 aa6.61□□□□□ -1.35
GTF3C3-208ENST00000455546 LRP5O75197 1615 aa6.61□□□□□ -1.35
GTF3C3-208ENST00000455546 WNK3Q9BYP7 1800 aa6.6□□□□□ -1.35
GTF3C3-208ENST00000455546 PLSCR1O15162 318 aa6.6□□□□□ -1.35
GTF3C3-208ENST00000455546 TRIM26Q12899 539 aaPredicted RBP6.6□□□□□ -1.35
GTF3C3-208ENST00000455546 AMHR2Q16671 573 aa6.6□□□□□ -1.35
GTF3C3-208ENST00000455546 ANKRD24Q8TF21 1146 aa6.6□□□□□ -1.35
GTF3C3-208ENST00000455546 TESK2Q96S53 571 aa6.6□□□□□ -1.35
GTF3C3-208ENST00000455546 CDCA7Q9BWT1 371 aaPredicted RBP6.6□□□□□ -1.35
GTF3C3-208ENST00000455546 FAM117AQ9C073 453 aa6.6□□□□□ -1.35
GTF3C3-208ENST00000455546 TERF2IPQ9NYB0 399 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms