RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 MYH7P12883 1935 aa6.66□□□□□ -1.34
RIF1-207ENST00000454583 PDE3BQ13370 1112 aa6.66□□□□□ -1.34
RIF1-207ENST00000454583 NUTM2GQ5VZR2 741 aa6.66□□□□□ -1.34
RIF1-207ENST00000454583 ERICH6BQ5W0A0 696 aa6.66□□□□□ -1.34
RIF1-207ENST00000454583 FER1L6Q2WGJ9 1857 aa6.66□□□□□ -1.34
RIF1-207ENST00000454583 DICER1Q9UPY3 1922 aaKnown RBP6.66□□□□□ -1.34
RIF1-207ENST00000454583 RIC1Q4ADV7 1423 aa6.66□□□□□ -1.34
RIF1-207ENST00000454583 MAST2Q6P0Q8 1798 aa6.66□□□□□ -1.34
RIF1-207ENST00000454583 PRKAR2BP31323 418 aa6.65□□□□□ -1.34
RIF1-207ENST00000454583 AKAP4Q5JQC9 854 aa6.65□□□□□ -1.34
RIF1-207ENST00000454583 IFT57Q9NWB7 429 aa6.65□□□□□ -1.34
RIF1-207ENST00000454583 DUOX1Q9NRD9 1551 aa6.65□□□□□ -1.34
RIF1-207ENST00000454583 SOS1Q07889 1333 aaPredicted RBP6.65□□□□□ -1.34
RIF1-207ENST00000454583 MARCH10Q8NA82 808 aaPredicted RBP6.65□□□□□ -1.34
RIF1-207ENST00000454583 ECM29Q5VYK3 1845 aa6.65□□□□□ -1.35
RIF1-207ENST00000454583 CFAP44Q96MT7 982 aa6.64□□□□□ -1.35
RIF1-207ENST00000454583 RNMTO43148 476 aaKnown RBP6.64□□□□□ -1.35
RIF1-207ENST00000454583 LGR6Q9HBX8 967 aa6.64□□□□□ -1.35
RIF1-207ENST00000454583 ABCC4O15439 1325 aa6.64□□□□□ -1.35
RIF1-207ENST00000454583 APAF1O14727 1248 aa6.64□□□□□ -1.35
RIF1-207ENST00000454583 SULT6B1Q6IMI4 303 aa6.64□□□□□ -1.35
RIF1-207ENST00000454583 BCANQ96GW7 911 aa6.64□□□□□ -1.35
RIF1-207ENST00000454583 LAMA4Q16363 1823 aa6.64□□□□□ -1.35
RIF1-207ENST00000454583 ADCY9O60503 1353 aa6.63□□□□□ -1.35
RIF1-207ENST00000454583 VAMP4O75379 141 aa6.63□□□□□ -1.35
RIF1-207ENST00000454583 DSG3P32926 999 aa6.63□□□□□ -1.35
RIF1-207ENST00000454583 MBIPQ9NS73 344 aa6.63□□□□□ -1.35
RIF1-207ENST00000454583 MYH13Q9UKX3 1938 aa6.63□□□□□ -1.35
RIF1-207ENST00000454583 UBAP1LF5GYI3 381 aa6.63□□□□□ -1.35
RIF1-207ENST00000454583 CHRNA2Q15822 529 aa6.63□□□□□ -1.35
RIF1-207ENST00000454583 BTG4Q9NY30 223 aa6.63□□□□□ -1.35
RIF1-207ENST00000454583 AK9Q5TCS8 1911 aa6.63□□□□□ -1.35
RIF1-207ENST00000454583 SBF1O95248 1867 aa6.63□□□□□ -1.35
RIF1-207ENST00000454583 UTYO14607 1347 aa6.62□□□□□ -1.35
RIF1-207ENST00000454583 PCDH11XQ9BZA7 1347 aa6.62□□□□□ -1.35
RIF1-207ENST00000454583 PCDH11YQ9BZA8 1340 aa6.62□□□□□ -1.35
RIF1-207ENST00000454583 EIF4A1P60842 406 aaKnown RBP6.62□□□□□ -1.35
RIF1-207ENST00000454583 PTF1AQ7RTS3 328 aa6.62□□□□□ -1.35
RIF1-207ENST00000454583 USHBP1Q8N6Y0 703 aa6.62□□□□□ -1.35
RIF1-207ENST00000454583 NUDCQ9Y266 331 aa6.62□□□□□ -1.35
RIF1-207ENST00000454583 CCDC146Q8IYE0 955 aa6.62□□□□□ -1.35
RIF1-207ENST00000454583 SLC52A2Q9HAB3 445 aa6.62□□□□□ -1.35
RIF1-207ENST00000454583 ERVV-2B6SEH9 535 aa6.61□□□□□ -1.35
RIF1-207ENST00000454583 CT47B1P0C2W7 299 aaPredicted RBP6.61□□□□□ -1.35
RIF1-207ENST00000454583 AMOTQ4VCS5 1084 aa6.61□□□□□ -1.35
RIF1-207ENST00000454583 TSPYL6Q8N831 410 aa6.61□□□□□ -1.35
RIF1-207ENST00000454583 AFF2P51816 1311 aa6.61□□□□□ -1.35
RIF1-207ENST00000454583 HMOX1P09601 288 aa6.61□□□□□ -1.35
RIF1-207ENST00000454583 HOXB7P09629 217 aa6.61□□□□□ -1.35
RIF1-207ENST00000454583 ZC3H6P61129 1189 aaKnown RBP6.61□□□□□ -1.35
RIF1-207ENST00000454583 AMIGO3Q86WK7 504 aa6.61□□□□□ -1.35
RIF1-207ENST00000454583 GJD4Q96KN9 370 aaPredicted RBP6.61□□□□□ -1.35
RIF1-207ENST00000454583 POTEAQ6S8J7 498 aa6.61□□□□□ -1.35
RIF1-207ENST00000454583 KDM2BQ8NHM5 1336 aa6.6□□□□□ -1.35
RIF1-207ENST00000454583 KCNQ3O43525 872 aa6.6□□□□□ -1.35
RIF1-207ENST00000454583 MRPL50Q8N5N7 158 aaKnown RBP6.6□□□□□ -1.35
RIF1-207ENST00000454583 RARSP54136 660 aaKnown RBP6.6□□□□□ -1.35
RIF1-207ENST00000454583 C8orf58Q8NAV2 365 aa6.6□□□□□ -1.35
RIF1-207ENST00000454583 RGL2O15211 777 aa6.59□□□□□ -1.35
RIF1-207ENST00000454583 IL2RBP14784 551 aa6.59□□□□□ -1.35
RIF1-207ENST00000454583 CASP7P55210 303 aa6.59□□□□□ -1.35
RIF1-207ENST00000454583 CDCA7Q9BWT1 371 aaPredicted RBP6.59□□□□□ -1.35
RIF1-207ENST00000454583 GNAT3A8MTJ3 354 aa6.59□□□□□ -1.35
RIF1-207ENST00000454583 TNNT2P45379 298 aaPredicted RBP6.59□□□□□ -1.35
RIF1-207ENST00000454583 ATG3Q9NT62 314 aa6.59□□□□□ -1.35
RIF1-207ENST00000454583 SIPA1L1O43166 1804 aa6.59□□□□□ -1.35
RIF1-207ENST00000454583 E9PSI1 815 aa6.59□□□□□ -1.35
RIF1-207ENST00000454583 ALDH1L2Q3SY69 923 aa6.59□□□□□ -1.35
RIF1-207ENST00000454583 YTHDC1Q96MU7 727 aaKnown RBP6.59□□□□□ -1.35
RIF1-207ENST00000454583 VSIG10Q8N0Z9 540 aa6.58□□□□□ -1.36
RIF1-207ENST00000454583 DCAF5Q96JK2 942 aa6.58□□□□□ -1.36
RIF1-207ENST00000454583 CHD4Q14839 1912 aa6.58□□□□□ -1.36
RIF1-207ENST00000454583 PRAMEF22A3QJZ6 481 aa6.58□□□□□ -1.36
RIF1-207ENST00000454583 GIGYF1O75420 1035 aaPredicted RBP6.58□□□□□ -1.36
RIF1-207ENST00000454583 DCTN1Q14203 1278 aa6.58□□□□□ -1.36
RIF1-207ENST00000454583 MCM10Q7L590 875 aa6.58□□□□□ -1.36
RIF1-207ENST00000454583 GAS2L2Q8NHY3 880 aa6.58□□□□□ -1.36
RIF1-207ENST00000454583 PIGBQ92521 554 aa6.58□□□□□ -1.36
RIF1-207ENST00000454583 THUMPD2Q9BTF0 503 aaKnown RBP6.58□□□□□ -1.36
RIF1-207ENST00000454583 ADAMTSL1Q8N6G6 1762 aa6.58□□□□□ -1.36
RIF1-207ENST00000454583 NBPF26B4DH59 902 aa6.57□□□□□ -1.36
RIF1-207ENST00000454583 NBPF14Q5TI25 921 aa6.57□□□□□ -1.36
RIF1-207ENST00000454583 NBPF10Q6P3W6 841 aaKnown RBP6.57□□□□□ -1.36
RIF1-207ENST00000454583 INTS5Q6P9B9 1019 aaKnown RBP6.57□□□□□ -1.36
RIF1-207ENST00000454583 NBPF15Q8N660 670 aa6.57□□□□□ -1.36
RIF1-207ENST00000454583 RIPK4P57078 832 aa6.57□□□□□ -1.36
RIF1-207ENST00000454583 CFAP53Q96M91 514 aa6.57□□□□□ -1.36
RIF1-207ENST00000454583 TSHZ2Q9NRE2 1034 aa6.57□□□□□ -1.36
RIF1-207ENST00000454583 GREB1LQ9C091 1923 aaPredicted RBP6.57□□□□□ -1.36
RIF1-207ENST00000454583 KRT24Q2M2I5 525 aa6.57□□□□□ -1.36
RIF1-207ENST00000454583 ARHGAP45Q92619 1136 aa6.57□□□□□ -1.36
RIF1-207ENST00000454583 IRS2Q9Y4H2 1338 aa6.57□□□□□ -1.36
RIF1-207ENST00000454583 TIAM2Q8IVF5 1701 aa6.56□□□□□ -1.36
RIF1-207ENST00000454583 PAK3O75914 559 aaPredicted RBP6.56□□□□□ -1.36
RIF1-207ENST00000454583 U2AF1L5P0DN76 240 aaPredicted RBP6.56□□□□□ -1.36
RIF1-207ENST00000454583 RLBP1P12271 317 aa6.56□□□□□ -1.36
RIF1-207ENST00000454583 U2AF1Q01081 240 aaKnown RBP eCLIP6.56□□□□□ -1.363e-6■■■■■ 27.1
RIF1-207ENST00000454583 ZNF428Q96B54 188 aa6.56□□□□□ -1.36
RIF1-207ENST00000454583 TNNQ9UQP3 1299 aa6.56□□□□□ -1.36
RIF1-207ENST00000454583 AMPHP49418 695 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms