RNA–Protein interactions for RNA: ENST00000454323.1

CUL3-208, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-208ENST00000454323 TIMELESSQ9UNS1 1208 aa10.13□□□□□ -0.79
CUL3-208ENST00000454323 GTF3C3Q9Y5Q9 886 aa10.13□□□□□ -0.79
CUL3-208ENST00000454323 EFHC2Q5JST6 749 aa10.12□□□□□ -0.79
CUL3-208ENST00000454323 GNASQ5JWF2 1037 aa10.12□□□□□ -0.79
CUL3-208ENST00000454323 KLRG1Q96E93 195 aa10.12□□□□□ -0.79
CUL3-208ENST00000454323 KDM4CQ9H3R0 1056 aa10.12□□□□□ -0.79
CUL3-208ENST00000454323 ARHGEF10LQ9HCE6 1279 aa10.12□□□□□ -0.79
CUL3-208ENST00000454323 ATXN7L1Q9ULK2 861 aaPredicted RBP10.12□□□□□ -0.79
CUL3-208ENST00000454323 GNB5O14775 395 aa10.11□□□□□ -0.79
CUL3-208ENST00000454323 GRIN2CQ14957 1233 aa10.11□□□□□ -0.79
CUL3-208ENST00000454323 FBXO31Q5XUX0 539 aaPredicted RBP10.11□□□□□ -0.79
CUL3-208ENST00000454323 SLCO4C1Q6ZQN7 724 aa10.11□□□□□ -0.79
CUL3-208ENST00000454323 PCDHB11Q9Y5F2 797 aa10.11□□□□□ -0.79
CUL3-208ENST00000454323 SHISA8B8ZZ34 492 aa10.1□□□□□ -0.79
CUL3-208ENST00000454323 BMP4P12644 408 aa10.1□□□□□ -0.79
CUL3-208ENST00000454323 ESYT1Q9BSJ8 1104 aa10.1□□□□□ -0.79
CUL3-208ENST00000454323 TRAK2O60296 914 aa10.09□□□□□ -0.79
CUL3-208ENST00000454323 MYCP01106 439 aaPredicted RBP10.09□□□□□ -0.79
CUL3-208ENST00000454323 FBXO45P0C2W1 286 aa10.09□□□□□ -0.79
CUL3-208ENST00000454323 ZSCAN10Q96SZ4 725 aaPredicted RBP10.09□□□□□ -0.79
CUL3-208ENST00000454323 TRIM34Q9BYJ4 488 aa10.09□□□□□ -0.79
CUL3-208ENST00000454323 FURINP09958 794 aa10.08□□□□□ -0.8
CUL3-208ENST00000454323 GPAMQ9HCL2 828 aa10.08□□□□□ -0.8
CUL3-208ENST00000454323 NR1H3Q13133 447 aa10.07□□□□□ -0.8
CUL3-208ENST00000454323 TMEM132AQ24JP5 1023 aa10.07□□□□□ -0.8
CUL3-208ENST00000454323 ESCO1Q5FWF5 840 aa10.07□□□□□ -0.8
CUL3-208ENST00000454323 CNKSR1Q969H4 720 aa10.07□□□□□ -0.8
CUL3-208ENST00000454323 PCMTD1Q96MG8 357 aaPredicted RBP10.07□□□□□ -0.8
CUL3-208ENST00000454323 FAM117AQ9C073 453 aa10.07□□□□□ -0.8
CUL3-208ENST00000454323 OSBPL3Q9H4L5 887 aa10.07□□□□□ -0.8
CUL3-208ENST00000454323 GOPCQ9HD26 462 aa10.07□□□□□ -0.8
CUL3-208ENST00000454323 TMEM214Q6NUQ4 689 aaKnown RBP10.06□□□□□ -0.8
CUL3-208ENST00000454323 FIGNL1Q6PIW4 674 aa10.06□□□□□ -0.8
CUL3-208ENST00000454323 APBB1O00213 710 aa10.05□□□□□ -0.8
CUL3-208ENST00000454323 COL8A1P27658 744 aa10.05□□□□□ -0.8
CUL3-208ENST00000454323 SCTRP47872 440 aa10.04□□□□□ -0.8
CUL3-208ENST00000454323 CENPCQ03188 943 aa10.04□□□□□ -0.8
CUL3-208ENST00000454323 ARAFP10398 606 aa10.03□□□□□ -0.8
CUL3-208ENST00000454323 FGFR3P22607 806 aa10.03□□□□□ -0.8
CUL3-208ENST00000454323 LINC00114Q6XXX2 140 aa10.02□□□□□ -0.81
CUL3-208ENST00000454323 ERICH6Q7L0X2 663 aa10.02□□□□□ -0.81
CUL3-208ENST00000454323 KRTAP4-8Q9BYQ9 185 aa10.02□□□□□ -0.81
CUL3-208ENST00000454323 RAB6BQ9NRW1 208 aa10.02□□□□□ -0.81
CUL3-208ENST00000454323 GGA1Q9UJY5 639 aa10.02□□□□□ -0.81
CUL3-208ENST00000454323 PHKA2P46019 1235 aa10.01□□□□□ -0.81
CUL3-208ENST00000454323 C1orf229Q6ZS94 237 aaPredicted RBP10.01□□□□□ -0.81
CUL3-208ENST00000454323 GPBP1L1Q9HC44 474 aaPredicted RBP10.01□□□□□ -0.81
CUL3-208ENST00000454323 C1QTNF9BB2RNN3 333 aa10□□□□□ -0.81
CUL3-208ENST00000454323 SOCS7O14512 581 aa10□□□□□ -0.81
CUL3-208ENST00000454323 IL2RAP01589 272 aa10□□□□□ -0.81
CUL3-208ENST00000454323 EPXP11678 715 aa10□□□□□ -0.81
CUL3-208ENST00000454323 C1orf216Q8TAB5 229 aa10□□□□□ -0.81
CUL3-208ENST00000454323 RHBDD1Q8TEB9 315 aa10□□□□□ -0.81
CUL3-208ENST00000454323 XAGE2Q96GT9 111 aa10□□□□□ -0.81
CUL3-208ENST00000454323 PSMG3-AS1Q96PY0 264 aa10□□□□□ -0.81
CUL3-208ENST00000454323 CRISPLD1Q9H336 500 aa10□□□□□ -0.81
CUL3-208ENST00000454323 MSX1P28360 303 aa9.99□□□□□ -0.81
CUL3-208ENST00000454323 BTBD6Q96KE9 485 aa9.99□□□□□ -0.81
CUL3-208ENST00000454323 RUBCNLQ9H714 662 aa9.99□□□□□ -0.81
CUL3-208ENST00000454323 THBS1P07996 1170 aa9.98□□□□□ -0.81
CUL3-208ENST00000454323 UBAP2LQ14157 1087 aaKnown RBP9.98□□□□□ -0.81
CUL3-208ENST00000454323 RNF135Q8IUD6 432 aa9.98□□□□□ -0.81
CUL3-208ENST00000454323 ABHD17AQ96GS6 310 aa9.98□□□□□ -0.81
CUL3-208ENST00000454323 GJD4Q96KN9 370 aaPredicted RBP9.98□□□□□ -0.81
CUL3-208ENST00000454323 AVENQ9NQS1 362 aaPredicted RBP9.98□□□□□ -0.81
CUL3-208ENST00000454323 DGKGP49619 791 aa9.97□□□□□ -0.81
CUL3-208ENST00000454323 C4orf17Q53FE4 359 aa9.97□□□□□ -0.81
CUL3-208ENST00000454323 TBC1D9Q6ZT07 1266 aa9.97□□□□□ -0.81
CUL3-208ENST00000454323 CD163Q86VB7 1156 aa9.97□□□□□ -0.81
CUL3-208ENST00000454323 SUV39H2Q9H5I1 410 aa9.97□□□□□ -0.81
CUL3-208ENST00000454323 SPDYE3A6NKU9 549 aa9.96□□□□□ -0.82
CUL3-208ENST00000454323 NLRP8Q86W28 1048 aa9.96□□□□□ -0.82
CUL3-208ENST00000454323 SIRT1Q96EB6 747 aa9.96□□□□□ -0.82
CUL3-208ENST00000454323 FHDC1Q9C0D6 1143 aaPredicted RBP9.96□□□□□ -0.82
CUL3-208ENST00000454323 NDFIP2Q9NV92 336 aa9.96□□□□□ -0.82
CUL3-208ENST00000454323 PCDHGC4Q9Y5F7 938 aa9.96□□□□□ -0.82
CUL3-208ENST00000454323 HRH3Q9Y5N1 445 aa9.96□□□□□ -0.82
CUL3-208ENST00000454323 NDUFB9Q9Y6M9 179 aa9.96□□□□□ -0.82
CUL3-208ENST00000454323 ADH6P28332 368 aa9.95□□□□□ -0.82
CUL3-208ENST00000454323 BNIP3LO60238 219 aa9.94□□□□□ -0.82
CUL3-208ENST00000454323 HOXB4P17483 251 aaPredicted RBP9.94□□□□□ -0.82
CUL3-208ENST00000454323 PPARGC1BQ86YN6 1023 aaKnown RBP9.94□□□□□ -0.82
CUL3-208ENST00000454323 C2CD2LO14523 706 aa9.93□□□□□ -0.82
CUL3-208ENST00000454323 USP4Q13107 963 aa9.93□□□□□ -0.82
CUL3-208ENST00000454323 FAM182BQ5T319 152 aa9.93□□□□□ -0.82
CUL3-208ENST00000454323 CHSY3Q70JA7 882 aa9.93□□□□□ -0.82
CUL3-208ENST00000454323 BANK1Q8NDB2 785 aa9.93□□□□□ -0.82
CUL3-208ENST00000454323 SEMA6BQ9H3T3 888 aa9.93□□□□□ -0.82
CUL3-208ENST00000454323 NEURL1BA8MQ27 555 aa9.92□□□□□ -0.82
CUL3-208ENST00000454323 SPATA31C1P0DKV0 1188 aa9.92□□□□□ -0.82
CUL3-208ENST00000454323 CHRNA4P43681 627 aa9.92□□□□□ -0.82
CUL3-208ENST00000454323 CTBSQ01459 385 aa9.92□□□□□ -0.82
CUL3-208ENST00000454323 TLR1Q15399 786 aa9.92□□□□□ -0.82
CUL3-208ENST00000454323 ZMYM1Q5SVZ6 1142 aa9.92□□□□□ -0.82
CUL3-208ENST00000454323 GATA4P43694 442 aa9.91□□□□□ -0.82
CUL3-208ENST00000454323 ATXN7O15265 892 aaPredicted RBP9.89□□□□□ -0.83
CUL3-208ENST00000454323 CEP126Q9P2H0 1117 aa9.89□□□□□ -0.83
CUL3-208ENST00000454323 PLA2G4AP47712 749 aa9.88□□□□□ -0.83
CUL3-208ENST00000454323 NBPF1Q3BBV0 1214 aa9.88□□□□□ -0.83
CUL3-208ENST00000454323 NIFKQ9BYG3 293 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms