RNA–Protein interactions for RNA: ENST00000449832.1

AC009961.3-201, humanhuman

BASIC

Gene AC009961.3, Length 765 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009961.3-201ENST00000449832 PPARGC1BQ86YN6 1023 aaKnown RBP8.85□□□□□ -0.99
AC009961.3-201ENST00000449832 TRIM22Q8IYM9 498 aa8.85□□□□□ -0.99
AC009961.3-201ENST00000449832 DEPDC4Q8N2C3 294 aa8.85□□□□□ -0.99
AC009961.3-201ENST00000449832 CNTNAP3BQ96NU0 1288 aa8.85□□□□□ -0.99
AC009961.3-201ENST00000449832 SLC4A9Q96Q91 983 aa8.85□□□□□ -0.99
AC009961.3-201ENST00000449832 CNTNAP3Q9BZ76 1288 aa8.85□□□□□ -0.99
AC009961.3-201ENST00000449832 STK17AQ9UEE5 414 aa8.85□□□□□ -0.99
AC009961.3-201ENST00000449832 ZBTB7BO15156 539 aaPredicted RBP8.84□□□□□ -0.99
AC009961.3-201ENST00000449832 THBS1P07996 1170 aa8.84□□□□□ -0.99
AC009961.3-201ENST00000449832 ZNF295-AS1Q8N0V1 137 aa8.84□□□□□ -0.99
AC009961.3-201ENST00000449832 ZNF837Q96EG3 531 aaPredicted RBP8.84□□□□□ -0.99
AC009961.3-201ENST00000449832 TIMMDC1Q9NPL8 285 aa8.84□□□□□ -0.99
AC009961.3-201ENST00000449832 NOD1Q9Y239 953 aa8.84□□□□□ -0.99
AC009961.3-201ENST00000449832 PHKA2P46019 1235 aa8.83□□□□□ -1
AC009961.3-201ENST00000449832 PLEKHM2Q8IWE5 1019 aa8.83□□□□□ -1
AC009961.3-201ENST00000449832 GAS2L1Q99501 681 aaPredicted RBP8.83□□□□□ -1
AC009961.3-201ENST00000449832 F11P03951 625 aa8.82□□□□□ -1
AC009961.3-201ENST00000449832 SMTNP53814 917 aa8.82□□□□□ -1
AC009961.3-201ENST00000449832 GTF2IP78347 998 aa8.82□□□□□ -1
AC009961.3-201ENST00000449832 GAS6Q14393 721 aa8.82□□□□□ -1
AC009961.3-201ENST00000449832 TLR1Q15399 786 aa8.82□□□□□ -1
AC009961.3-201ENST00000449832 GLMNQ92990 594 aa8.82□□□□□ -1
AC009961.3-201ENST00000449832 GMCL1Q96IK5 515 aa8.82□□□□□ -1
AC009961.3-201ENST00000449832 ATP9BO43861 1147 aa8.81□□□□□ -1
AC009961.3-201ENST00000449832 MTFR1Q15390 333 aa8.81□□□□□ -1
AC009961.3-201ENST00000449832 TMEM214Q6NUQ4 689 aaKnown RBP8.81□□□□□ -1
AC009961.3-201ENST00000449832 RIPOR1Q6ZS17 1223 aa8.81□□□□□ -1
AC009961.3-201ENST00000449832 RHBDD1Q8TEB9 315 aa8.81□□□□□ -1
AC009961.3-201ENST00000449832 SERTAD1Q9UHV2 236 aa8.81□□□□□ -1
AC009961.3-201ENST00000449832 IQSEC3Q9UPP2 1182 aaPredicted RBP8.81□□□□□ -1
AC009961.3-201ENST00000449832 USP3Q9Y6I4 520 aa8.81□□□□□ -1
AC009961.3-201ENST00000449832 USP17L3A6NCW0 530 aa8.8□□□□□ -1
AC009961.3-201ENST00000449832 USP17L4A6NCW7 530 aa8.8□□□□□ -1
AC009961.3-201ENST00000449832 GNASQ5JWF2 1037 aa8.8□□□□□ -1
AC009961.3-201ENST00000449832 USP17L2Q6R6M4 530 aa8.8□□□□□ -1
AC009961.3-201ENST00000449832 USP17L1Q7RTZ2 530 aa8.8□□□□□ -1
AC009961.3-201ENST00000449832 A6NJY4 79 aa8.79□□□□□ -1
AC009961.3-201ENST00000449832 UBAP2LQ14157 1087 aaKnown RBP8.79□□□□□ -1
AC009961.3-201ENST00000449832 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.79□□□□□ -1
AC009961.3-201ENST00000449832 TFIP11Q9UBB9 837 aaKnown RBP8.79□□□□□ -1
AC009961.3-201ENST00000449832 KIAA1024Q9UPX6 916 aa8.79□□□□□ -1
AC009961.3-201ENST00000449832 A0A1B0GTH6 734 aa8.78□□□□□ -1
AC009961.3-201ENST00000449832 H7C1W4 665 aa8.78□□□□□ -1
AC009961.3-201ENST00000449832 CDK2AP1O14519 115 aa8.78□□□□□ -1
AC009961.3-201ENST00000449832 SLURP2P0DP57 97 aa8.78□□□□□ -1
AC009961.3-201ENST00000449832 MSX1P28360 303 aa8.78□□□□□ -1
AC009961.3-201ENST00000449832 CLDN10P78369 228 aa8.78□□□□□ -1
AC009961.3-201ENST00000449832 GTPBP3Q969Y2 492 aaKnown RBP8.78□□□□□ -1
AC009961.3-201ENST00000449832 ZNF358Q9NW07 568 aa8.78□□□□□ -1
AC009961.3-201ENST00000449832 GPR25O00155 361 aa8.77□□□□□ -1.01
AC009961.3-201ENST00000449832 DKK1O94907 266 aa8.77□□□□□ -1.01
AC009961.3-201ENST00000449832 EPHA4P54764 986 aa8.77□□□□□ -1.01
AC009961.3-201ENST00000449832 WHAMMQ8TF30 809 aa8.77□□□□□ -1.01
AC009961.3-201ENST00000449832 GPAMQ9HCL2 828 aa8.77□□□□□ -1.01
AC009961.3-201ENST00000449832 MKRN1Q9UHC7 482 aaKnown RBP8.77□□□□□ -1.01
AC009961.3-201ENST00000449832 GTF2E1P29083 439 aaPredicted RBP8.76□□□□□ -1.01
AC009961.3-201ENST00000449832 MAFBQ9Y5Q3 323 aaPredicted RBP8.76□□□□□ -1.01
AC009961.3-201ENST00000449832 PALM3A6NDB9 673 aaPredicted RBP8.75□□□□□ -1.01
AC009961.3-201ENST00000449832 FOXK2Q01167 660 aa8.75□□□□□ -1.01
AC009961.3-201ENST00000449832 TRIM50Q86XT4 487 aa8.75□□□□□ -1.01
AC009961.3-201ENST00000449832 CALR3Q96L12 384 aaKnown RBP8.75□□□□□ -1.01
AC009961.3-201ENST00000449832 NIFKQ9BYG3 293 aaKnown RBP8.75□□□□□ -1.01
AC009961.3-201ENST00000449832 PPP1R12CQ9BZL4 782 aa8.75□□□□□ -1.01
AC009961.3-201ENST00000449832 NUCKS1Q9H1E3 243 aaKnown RBP8.75□□□□□ -1.01
AC009961.3-201ENST00000449832 SCHIP1Q9P0W5 487 aaPredicted RBP8.75□□□□□ -1.01
AC009961.3-201ENST00000449832 BACH1O14867 736 aa8.74□□□□□ -1.01
AC009961.3-201ENST00000449832 PLA2G4AP47712 749 aa8.74□□□□□ -1.01
AC009961.3-201ENST00000449832 SRSF11Q05519 484 aaKnown RBP8.74□□□□□ -1.01
AC009961.3-201ENST00000449832 ZNF385CQ66K41 422 aaPredicted RBP8.74□□□□□ -1.01
AC009961.3-201ENST00000449832 CCDC102BQ68D86 513 aa8.74□□□□□ -1.01
AC009961.3-201ENST00000449832 OGFOD1Q8N543 542 aa8.74□□□□□ -1.01
AC009961.3-201ENST00000449832 RUBCNLQ9H714 662 aa8.74□□□□□ -1.01
AC009961.3-201ENST00000449832 ZNF777Q9ULD5 760 aaPredicted RBP8.74□□□□□ -1.01
AC009961.3-201ENST00000449832 ADAMTS2O95450 1211 aa8.73□□□□□ -1.01
AC009961.3-201ENST00000449832 ATP4AP20648 1035 aa8.73□□□□□ -1.01
AC009961.3-201ENST00000449832 PSME1Q06323 249 aa8.73□□□□□ -1.01
AC009961.3-201ENST00000449832 KANK4Q5T7N3 995 aaPredicted RBP8.73□□□□□ -1.01
AC009961.3-201ENST00000449832 TNS4Q8IZW8 715 aa8.73□□□□□ -1.01
AC009961.3-201ENST00000449832 LARGE2Q8N3Y3 721 aa8.73□□□□□ -1.01
AC009961.3-201ENST00000449832 TPCN2Q8NHX9 752 aa8.73□□□□□ -1.01
AC009961.3-201ENST00000449832 ZDHHC1Q8WTX9 485 aa8.73□□□□□ -1.01
AC009961.3-201ENST00000449832 CRISPLD1Q9H336 500 aa8.73□□□□□ -1.01
AC009961.3-201ENST00000449832 DNAAF2Q9NVR5 837 aaKnown RBP8.73□□□□□ -1.01
AC009961.3-201ENST00000449832 ATP1A2P50993 1020 aa8.72□□□□□ -1.01
AC009961.3-201ENST00000449832 FOXR1Q6PIV2 292 aa8.72□□□□□ -1.01
AC009961.3-201ENST00000449832 FAM181BA6NEQ2 426 aa8.71□□□□□ -1.02
AC009961.3-201ENST00000449832 ARHGEF15O94989 841 aa8.71□□□□□ -1.02
AC009961.3-201ENST00000449832 LBRQ14739 615 aaKnown RBP8.71□□□□□ -1.02
AC009961.3-201ENST00000449832 LYPD4Q6UWN0 246 aa8.71□□□□□ -1.02
AC009961.3-201ENST00000449832 SIX5Q8N196 739 aa8.71□□□□□ -1.02
AC009961.3-201ENST00000449832 C7orf43Q8WVR3 580 aa8.71□□□□□ -1.02
AC009961.3-201ENST00000449832 CFHR5Q9BXR6 569 aa8.71□□□□□ -1.02
AC009961.3-201ENST00000449832 MBIPQ9NS73 344 aa8.71□□□□□ -1.02
AC009961.3-201ENST00000449832 NDFIP2Q9NV92 336 aa8.71□□□□□ -1.02
AC009961.3-201ENST00000449832 C1orf216Q8TAB5 229 aa8.7□□□□□ -1.02
AC009961.3-201ENST00000449832 AIDAQ96BJ3 306 aa8.7□□□□□ -1.02
AC009961.3-201ENST00000449832 CABP1Q9NZU7 370 aa8.7□□□□□ -1.02
AC009961.3-201ENST00000449832 HCN2Q9UL51 889 aa8.7□□□□□ -1.02
AC009961.3-201ENST00000449832 PARP3Q9Y6F1 533 aa8.7□□□□□ -1.02
AC009961.3-201ENST00000449832 M0R2N6 131 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms