RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 TRAPPC3LQ5T215 181 aa17.98■□□□□ 0.47
AC004540.1-204ENST00000449537 PKD1L3Q7Z443 1732 aa17.98■□□□□ 0.47
AC004540.1-204ENST00000449537 RGPD2P0DJD1 1756 aa17.97■□□□□ 0.47
AC004540.1-204ENST00000449537 USHBP1Q8N6Y0 703 aa17.97■□□□□ 0.47
AC004540.1-204ENST00000449537 SLC12A5Q9H2X9 1139 aa17.97■□□□□ 0.47
AC004540.1-204ENST00000449537 PARP3Q9Y6F1 533 aa17.97■□□□□ 0.47
AC004540.1-204ENST00000449537 ATP6V1AP38606 617 aa17.96■□□□□ 0.47
AC004540.1-204ENST00000449537 TERF2IPQ9NYB0 399 aa17.96■□□□□ 0.47
AC004540.1-204ENST00000449537 MKRN1Q9UHC7 482 aaKnown RBP17.96■□□□□ 0.47
AC004540.1-204ENST00000449537 EDC4Q6P2E9 1401 aaKnown RBP17.96■□□□□ 0.47
AC004540.1-204ENST00000449537 GLTPD2A6NH11 291 aa17.95■□□□□ 0.46
AC004540.1-204ENST00000449537 FBLN1P23142 703 aa17.95■□□□□ 0.46
AC004540.1-204ENST00000449537 ITPK1Q13572 414 aa17.95■□□□□ 0.46
AC004540.1-204ENST00000449537 RTCBQ9Y3I0 505 aaKnown RBP17.95■□□□□ 0.46
AC004540.1-204ENST00000449537 ARFGEF1Q9Y6D6 1849 aa17.95■□□□□ 0.46
AC004540.1-204ENST00000449537 ZC3H4Q9UPT8 1303 aaKnown RBP17.95■□□□□ 0.46
AC004540.1-204ENST00000449537 CD163L1Q9NR16 1453 aa17.95■□□□□ 0.46
AC004540.1-204ENST00000449537 CYP27B1O15528 508 aa17.94■□□□□ 0.46
AC004540.1-204ENST00000449537 CTCFP49711 727 aaPredicted RBP17.94■□□□□ 0.46
AC004540.1-204ENST00000449537 AIDAQ96BJ3 306 aa17.94■□□□□ 0.46
AC004540.1-204ENST00000449537 COG3Q96JB2 828 aa17.94■□□□□ 0.46
AC004540.1-204ENST00000449537 BRCA1P38398 1863 aaKnown RBP17.94■□□□□ 0.46
AC004540.1-204ENST00000449537 CREBZFQ9NS37 354 aa17.93■□□□□ 0.46
AC004540.1-204ENST00000449537 ABHD8Q96I13 439 aa17.92■□□□□ 0.46
AC004540.1-204ENST00000449537 SBF1O95248 1867 aa17.92■□□□□ 0.46
AC004540.1-204ENST00000449537 ITGB4P16144 1822 aa17.91■□□□□ 0.46
AC004540.1-204ENST00000449537 GYS1P13807 737 aa17.91■□□□□ 0.46
AC004540.1-204ENST00000449537 RFC4P35249 363 aa17.91■□□□□ 0.46
AC004540.1-204ENST00000449537 MLLT1Q03111 559 aaPredicted RBP17.91■□□□□ 0.46
AC004540.1-204ENST00000449537 ARHGEF1Q92888 912 aaKnown RBP17.91■□□□□ 0.46
AC004540.1-204ENST00000449537 ASAP1Q9ULH1 1129 aa17.9■□□□□ 0.46
AC004540.1-204ENST00000449537 MAP2P11137 1827 aaKnown RBP17.89■□□□□ 0.45
AC004540.1-204ENST00000449537 ADRA2BP18089 450 aa17.89■□□□□ 0.45
AC004540.1-204ENST00000449537 LMNB1P20700 586 aa17.89■□□□□ 0.45
AC004540.1-204ENST00000449537 NKX1-1Q15270 411 aaPredicted RBP17.89■□□□□ 0.45
AC004540.1-204ENST00000449537 TMOD3Q9NYL9 352 aa17.89■□□□□ 0.45
AC004540.1-204ENST00000449537 CHRNA5P30532 468 aa17.88■□□□□ 0.45
AC004540.1-204ENST00000449537 LBX1P52954 281 aa17.88■□□□□ 0.45
AC004540.1-204ENST00000449537 C4AP0C0L4 1744 aa17.88■□□□□ 0.45
AC004540.1-204ENST00000449537 RASSF7Q02833 373 aa17.87■□□□□ 0.45
AC004540.1-204ENST00000449537 ROCK2O75116 1388 aaKnown RBP17.87■□□□□ 0.45
AC004540.1-204ENST00000449537 SMG6Q86US8 1419 aaKnown RBP17.87■□□□□ 0.45
AC004540.1-204ENST00000449537 POTECB2RU33 542 aa17.86■□□□□ 0.45
AC004540.1-204ENST00000449537 RRS1Q15050 365 aaKnown RBP17.86■□□□□ 0.45
AC004540.1-204ENST00000449537 RC3H1Q5TC82 1133 aaKnown RBP17.86■□□□□ 0.45
AC004540.1-204ENST00000449537 DPY19L2Q6NUT2 758 aa17.86■□□□□ 0.45
AC004540.1-204ENST00000449537 A0A1W2PP64 1363 aa17.86■□□□□ 0.45
AC004540.1-204ENST00000449537 RTL1A6NKG5 1358 aa17.85■□□□□ 0.45
AC004540.1-204ENST00000449537 RGS19P49795 217 aa17.85■□□□□ 0.45
AC004540.1-204ENST00000449537 L3MBTL2Q969R5 705 aa17.85■□□□□ 0.45
AC004540.1-204ENST00000449537 ATG3Q9NT62 314 aa17.85■□□□□ 0.45
AC004540.1-204ENST00000449537 CNTNAP1P78357 1384 aa17.84■□□□□ 0.45
AC004540.1-204ENST00000449537 RPS6KA4O75676 772 aa17.84■□□□□ 0.45
AC004540.1-204ENST00000449537 CHADLQ6NUI6 762 aa17.84■□□□□ 0.45
AC004540.1-204ENST00000449537 SPG7Q9UQ90 795 aa17.84■□□□□ 0.45
AC004540.1-204ENST00000449537 CCDC85CA6NKD9 419 aa17.83■□□□□ 0.44
AC004540.1-204ENST00000449537 WBP1LQ9NX94 342 aa17.83■□□□□ 0.44
AC004540.1-204ENST00000449537 KDM6AO15550 1401 aaPredicted RBP17.82■□□□□ 0.44
AC004540.1-204ENST00000449537 HSP90AB2PQ58FF8 381 aa17.82■□□□□ 0.44
AC004540.1-204ENST00000449537 VEGFBP49765 207 aa17.81■□□□□ 0.44
AC004540.1-204ENST00000449537 RBM42Q9BTD8 480 aaKnown RBP17.8■□□□□ 0.44
AC004540.1-204ENST00000449537 DDR1Q08345 913 aa17.79■□□□□ 0.44
AC004540.1-204ENST00000449537 FKBP8Q14318 412 aa17.79■□□□□ 0.44
AC004540.1-204ENST00000449537 PUS7Q96PZ0 661 aaKnown RBP17.79■□□□□ 0.44
AC004540.1-204ENST00000449537 INSRP06213 1382 aa17.79■□□□□ 0.44
AC004540.1-204ENST00000449537 CNTNAP4Q9C0A0 1308 aa17.78■□□□□ 0.44
AC004540.1-204ENST00000449537 HSPA8P11142 646 aaKnown RBP17.78■□□□□ 0.44
AC004540.1-204ENST00000449537 SLC4A9Q96Q91 983 aa17.78■□□□□ 0.44
AC004540.1-204ENST00000449537 IFNL2Q8IZJ0 200 aa17.76■□□□□ 0.43
AC004540.1-204ENST00000449537 TTLL6Q8N841 843 aa17.76■□□□□ 0.43
AC004540.1-204ENST00000449537 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.76■□□□□ 0.43
AC004540.1-204ENST00000449537 SRP68Q9UHB9 627 aaKnown RBP17.76■□□□□ 0.43
AC004540.1-204ENST00000449537 TMEM88BA6NKF7 163 aa17.75■□□□□ 0.43
AC004540.1-204ENST00000449537 CCDC88AQ3V6T2 1871 aa17.75■□□□□ 0.43
AC004540.1-204ENST00000449537 POLRMTO00411 1230 aaKnown RBP17.74■□□□□ 0.43
AC004540.1-204ENST00000449537 POTEIP0CG38 1075 aa17.74■□□□□ 0.43
AC004540.1-204ENST00000449537 POTEJP0CG39 1038 aa17.74■□□□□ 0.43
AC004540.1-204ENST00000449537 TM4SF1P30408 202 aa17.74■□□□□ 0.43
AC004540.1-204ENST00000449537 KDRP35968 1356 aa17.74■□□□□ 0.43
AC004540.1-204ENST00000449537 PASKQ96RG2 1323 aa17.73■□□□□ 0.43
AC004540.1-204ENST00000449537 USP42Q9H9J4 1324 aaKnown RBP17.73■□□□□ 0.43
AC004540.1-204ENST00000449537 PHKG2P15735 406 aa17.73■□□□□ 0.43
AC004540.1-204ENST00000449537 MAP2K1Q02750 393 aaPredicted RBP17.73■□□□□ 0.43
AC004540.1-204ENST00000449537 ERFEQ4G0M1 354 aa17.73■□□□□ 0.43
AC004540.1-204ENST00000449537 GGNBP2Q9H3C7 697 aa17.73■□□□□ 0.43
AC004540.1-204ENST00000449537 FLT4P35916 1363 aa17.72■□□□□ 0.43
AC004540.1-204ENST00000449537 NFKBIEO00221 500 aa17.72■□□□□ 0.43
AC004540.1-204ENST00000449537 FYB1O15117 783 aa17.72■□□□□ 0.43
AC004540.1-204ENST00000449537 DEFB115Q30KQ5 88 aa17.71■□□□□ 0.43
AC004540.1-204ENST00000449537 KIF24Q5T7B8 1368 aa17.7■□□□□ 0.42
AC004540.1-204ENST00000449537 ERVV-2B6SEH9 535 aa17.7■□□□□ 0.42
AC004540.1-204ENST00000449537 LDHDQ86WU2 507 aa17.7■□□□□ 0.42
AC004540.1-204ENST00000449537 CARD11Q9BXL7 1154 aa17.7■□□□□ 0.42
AC004540.1-204ENST00000449537 TIAM2Q8IVF5 1701 aa17.69■□□□□ 0.42
AC004540.1-204ENST00000449537 DDNO94850 711 aaPredicted RBP17.69■□□□□ 0.42
AC004540.1-204ENST00000449537 CRKLP46109 303 aaKnown RBP17.69■□□□□ 0.42
AC004540.1-204ENST00000449537 CFAP44Q96MT7 982 aa17.69■□□□□ 0.42
AC004540.1-204ENST00000449537 VIRMAQ69YN4 1812 aaKnown RBP17.69■□□□□ 0.42
AC004540.1-204ENST00000449537 MYH14Q7Z406 1995 aaKnown RBP17.69■□□□□ 0.42
AC004540.1-204ENST00000449537 H0YIN7 160 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms