RNA–Protein interactions for RNA: ENST00000449174.1

COPS7B-213, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-213ENST00000449174 GNPATO15228 680 aa15.94■□□□□ 0.14
COPS7B-213ENST00000449174 HSPA5P11021 654 aaKnown RBP15.94■□□□□ 0.14
COPS7B-213ENST00000449174 PLEKHO1Q53GL0 409 aaPredicted RBP15.94■□□□□ 0.14
COPS7B-213ENST00000449174 ATG3Q9NT62 314 aa15.94■□□□□ 0.14
COPS7B-213ENST00000449174 KDRP35968 1356 aa15.93■□□□□ 0.14
COPS7B-213ENST00000449174 ITPK1Q13572 414 aa15.93■□□□□ 0.14
COPS7B-213ENST00000449174 AMIGO3Q86WK7 504 aa15.93■□□□□ 0.14
COPS7B-213ENST00000449174 SENP3-EIF4A1A0A087X0R7 540 aa15.92■□□□□ 0.14
COPS7B-213ENST00000449174 ADRA2BP18089 450 aa15.91■□□□□ 0.14
COPS7B-213ENST00000449174 MORC1Q86VD1 984 aa15.91■□□□□ 0.14
COPS7B-213ENST00000449174 RTCBQ9Y3I0 505 aaKnown RBP15.91■□□□□ 0.14
COPS7B-213ENST00000449174 GOLGB1Q14789 3259 aaKnown RBP15.91■□□□□ 0.14
COPS7B-213ENST00000449174 TRAPPC3LQ5T215 181 aa15.9■□□□□ 0.14
COPS7B-213ENST00000449174 RC3H1Q5TC82 1133 aaKnown RBP15.9■□□□□ 0.14
COPS7B-213ENST00000449174 COL5A3P25940 1745 aaPredicted RBP15.9■□□□□ 0.14
COPS7B-213ENST00000449174 CNTNAP4Q9C0A0 1308 aa15.9■□□□□ 0.14
COPS7B-213ENST00000449174 CABP4P57796 275 aa15.89■□□□□ 0.13
COPS7B-213ENST00000449174 C1orf141Q5JVX7 400 aa15.89■□□□□ 0.13
COPS7B-213ENST00000449174 ZNF530Q6P9A1 599 aaPredicted RBP15.89■□□□□ 0.13
COPS7B-213ENST00000449174 NLGN1Q8N2Q7 840 aa15.89■□□□□ 0.13
COPS7B-213ENST00000449174 KNSTRNQ9Y448 316 aa15.89■□□□□ 0.13
COPS7B-213ENST00000449174 KDM6AO15550 1401 aaPredicted RBP15.88■□□□□ 0.13
COPS7B-213ENST00000449174 ATP10DQ9P241 1426 aa15.88■□□□□ 0.13
COPS7B-213ENST00000449174 CCER1Q8TC90 406 aaPredicted RBP15.88■□□□□ 0.13
COPS7B-213ENST00000449174 ADCY9O60503 1353 aa15.87■□□□□ 0.13
COPS7B-213ENST00000449174 KIF13BQ9NQT8 1826 aa15.87■□□□□ 0.13
COPS7B-213ENST00000449174 CICQ96RK0 1608 aaPredicted RBP15.87■□□□□ 0.13
COPS7B-213ENST00000449174 MMP10P09238 476 aa15.87■□□□□ 0.13
COPS7B-213ENST00000449174 MTHFSP49914 203 aa15.87■□□□□ 0.13
COPS7B-213ENST00000449174 RBM42Q9BTD8 480 aaKnown RBP15.87■□□□□ 0.13
COPS7B-213ENST00000449174 TGFB2P61812 414 aa15.86■□□□□ 0.13
COPS7B-213ENST00000449174 SMIM5Q71RC9 77 aa15.86■□□□□ 0.13
COPS7B-213ENST00000449174 RPS6KA4O75676 772 aa15.85■□□□□ 0.13
COPS7B-213ENST00000449174 SULT6B1Q6IMI4 303 aa15.85■□□□□ 0.13
COPS7B-213ENST00000449174 SLC4A9Q96Q91 983 aa15.85■□□□□ 0.13
COPS7B-213ENST00000449174 GPBP1L1Q9HC44 474 aaPredicted RBP15.85■□□□□ 0.13
COPS7B-213ENST00000449174 IL13P35225 146 aa15.84■□□□□ 0.13
COPS7B-213ENST00000449174 RFC4P35249 363 aa15.84■□□□□ 0.13
COPS7B-213ENST00000449174 AEBP1Q8IUX7 1158 aa15.84■□□□□ 0.13
COPS7B-213ENST00000449174 C10orf71Q711Q0 1435 aa15.84■□□□□ 0.13
COPS7B-213ENST00000449174 C4AP0C0L4 1744 aa15.83■□□□□ 0.13
COPS7B-213ENST00000449174 SCN11AQ9UI33 1791 aa15.83■□□□□ 0.12
COPS7B-213ENST00000449174 ARHGEF1Q92888 912 aaKnown RBP15.83■□□□□ 0.12
COPS7B-213ENST00000449174 CCDC87Q9NVE4 849 aa15.83■□□□□ 0.12
COPS7B-213ENST00000449174 PXDNLA1KZ92 1463 aa15.83■□□□□ 0.12
COPS7B-213ENST00000449174 AKAP4Q5JQC9 854 aa15.82■□□□□ 0.12
COPS7B-213ENST00000449174 AMER1Q5JTC6 1135 aaPredicted RBP15.82■□□□□ 0.12
COPS7B-213ENST00000449174 NFATC2IPQ8NCF5 419 aa15.82■□□□□ 0.12
COPS7B-213ENST00000449174 KIAA1551Q9HCM1 1747 aa15.82■□□□□ 0.12
COPS7B-213ENST00000449174 GYS1P13807 737 aa15.81■□□□□ 0.12
COPS7B-213ENST00000449174 PARP3Q9Y6F1 533 aa15.81■□□□□ 0.12
COPS7B-213ENST00000449174 TJP1Q07157 1748 aa15.8■□□□□ 0.12
COPS7B-213ENST00000449174 PTCD1O75127 700 aaKnown RBP15.8■□□□□ 0.12
COPS7B-213ENST00000449174 KIF7Q2M1P5 1343 aa15.79■□□□□ 0.12
COPS7B-213ENST00000449174 CRKLP46109 303 aaKnown RBP15.79■□□□□ 0.12
COPS7B-213ENST00000449174 N4BP2Q86UW6 1770 aaPredicted RBP15.79■□□□□ 0.12
COPS7B-213ENST00000449174 MYH14Q7Z406 1995 aaKnown RBP15.78■□□□□ 0.12
COPS7B-213ENST00000449174 MRC1P22897 1456 aa15.78■□□□□ 0.12
COPS7B-213ENST00000449174 USP42Q9H9J4 1324 aaKnown RBP15.78■□□□□ 0.12
COPS7B-213ENST00000449174 SLC52A2Q9HAB3 445 aa15.78■□□□□ 0.12
COPS7B-213ENST00000449174 WWC3Q9ULE0 1092 aa15.78■□□□□ 0.12
COPS7B-213ENST00000449174 BRCA1P38398 1863 aaKnown RBP15.76■□□□□ 0.11
COPS7B-213ENST00000449174 BCS1LQ9Y276 419 aa15.76■□□□□ 0.11
COPS7B-213ENST00000449174 ADAMTS7Q9UKP4 1686 aa15.76■□□□□ 0.11
COPS7B-213ENST00000449174 A0A0G2JLW4 131 aa15.75■□□□□ 0.11
COPS7B-213ENST00000449174 DIAPH1O60610 1272 aaKnown RBP15.75■□□□□ 0.11
COPS7B-213ENST00000449174 ZNF526Q8TF50 670 aaPredicted RBP15.75■□□□□ 0.11
COPS7B-213ENST00000449174 NPC1L1Q9UHC9 1359 aa15.75■□□□□ 0.11
COPS7B-213ENST00000449174 VIRMAQ69YN4 1812 aaKnown RBP15.74■□□□□ 0.11
COPS7B-213ENST00000449174 ARFGEF1Q9Y6D6 1849 aa15.74■□□□□ 0.11
COPS7B-213ENST00000449174 PER1O15534 1290 aaPredicted RBP15.74■□□□□ 0.11
COPS7B-213ENST00000449174 DPEP1P16444 411 aa15.74■□□□□ 0.11
COPS7B-213ENST00000449174 RNMTO43148 476 aaKnown RBP15.73■□□□□ 0.11
COPS7B-213ENST00000449174 ZPR1O75312 459 aa15.73■□□□□ 0.11
COPS7B-213ENST00000449174 FCHSD2O94868 740 aa15.73■□□□□ 0.11
COPS7B-213ENST00000449174 HSPA6P17066 643 aa15.73■□□□□ 0.11
COPS7B-213ENST00000449174 INTS5Q6P9B9 1019 aaKnown RBP15.73■□□□□ 0.11
COPS7B-213ENST00000449174 VSIG10Q8N0Z9 540 aa15.73■□□□□ 0.11
COPS7B-213ENST00000449174 SOS1Q07889 1333 aaPredicted RBP15.72■□□□□ 0.11
COPS7B-213ENST00000449174 HMOX1P09601 288 aa15.72■□□□□ 0.11
COPS7B-213ENST00000449174 FKBP8Q14318 412 aa15.72■□□□□ 0.11
COPS7B-213ENST00000449174 ARHGAP27Q6ZUM4 889 aa15.72■□□□□ 0.11
COPS7B-213ENST00000449174 DNAJC10Q8IXB1 793 aa15.72■□□□□ 0.11
COPS7B-213ENST00000449174 LGR6Q9HBX8 967 aa15.72■□□□□ 0.11
COPS7B-213ENST00000449174 PIM2Q9P1W9 311 aa15.72■□□□□ 0.11
COPS7B-213ENST00000449174 SRP68Q9UHB9 627 aaKnown RBP15.72■□□□□ 0.11
COPS7B-213ENST00000449174 KCPQ6ZWJ8 1503 aa15.72■□□□□ 0.11
COPS7B-213ENST00000449174 KIF3CO14782 793 aa15.71■□□□□ 0.11
COPS7B-213ENST00000449174 KCNA3P22001 575 aa15.71■□□□□ 0.11
COPS7B-213ENST00000449174 MTHFSDQ2M296 383 aaKnown RBP15.71■□□□□ 0.11
COPS7B-213ENST00000449174 UBR2Q8IWV8 1755 aa15.7■□□□□ 0.1
COPS7B-213ENST00000449174 CYP19A1P11511 503 aaPredicted RBP15.7■□□□□ 0.1
COPS7B-213ENST00000449174 TM4SF1P30408 202 aa15.7■□□□□ 0.1
COPS7B-213ENST00000449174 DDR1Q08345 913 aa15.7■□□□□ 0.1
COPS7B-213ENST00000449174 DALRD3Q5D0E6 543 aaKnown RBP15.7■□□□□ 0.1
COPS7B-213ENST00000449174 CC2D1BQ5T0F9 858 aaKnown RBP15.7■□□□□ 0.1
COPS7B-213ENST00000449174 POLRMTO00411 1230 aaKnown RBP15.69■□□□□ 0.1
COPS7B-213ENST00000449174 USPL1Q5W0Q7 1092 aa15.69■□□□□ 0.1
COPS7B-213ENST00000449174 NARFQ9UHQ1 456 aa15.69■□□□□ 0.1
COPS7B-213ENST00000449174 COL15A1P39059 1388 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms