RNA–Protein interactions for RNA: ENST00000448885.5

PCDH15-219, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 6,937 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-219ENST00000448885 IFFO1Q0D2I5 559 aa7.19□□□□□ -1.26
PCDH15-219ENST00000448885 MAP3K11Q16584 847 aa7.19□□□□□ -1.26
PCDH15-219ENST00000448885 TMCO3Q6UWJ1 677 aa7.19□□□□□ -1.26
PCDH15-219ENST00000448885 DDX54Q8TDD1 881 aaKnown RBP7.19□□□□□ -1.26
PCDH15-219ENST00000448885 CCDC113Q9H0I3 377 aa7.19□□□□□ -1.26
PCDH15-219ENST00000448885 NUTM2BA6NNL0 878 aaPredicted RBP7.19□□□□□ -1.26
PCDH15-219ENST00000448885 NUTM2EB1AL46 878 aaPredicted RBP7.19□□□□□ -1.26
PCDH15-219ENST00000448885 NUTM2AQ8IVF1 878 aaPredicted RBP7.19□□□□□ -1.26
PCDH15-219ENST00000448885 POLR3DP05423 398 aaPredicted RBP7.18□□□□□ -1.26
PCDH15-219ENST00000448885 CRACR2BQ8N4Y2 399 aaPredicted RBP7.18□□□□□ -1.26
PCDH15-219ENST00000448885 ZNF652Q9Y2D9 606 aa7.18□□□□□ -1.26
PCDH15-219ENST00000448885 FERP16591 822 aa7.18□□□□□ -1.26
PCDH15-219ENST00000448885 TSNARE1Q96NA8 513 aa7.18□□□□□ -1.26
PCDH15-219ENST00000448885 ANKRD30BQ9BXX2 1392 aa7.18□□□□□ -1.26
PCDH15-219ENST00000448885 CAVIN4Q5BKX8 364 aa7.18□□□□□ -1.26
PCDH15-219ENST00000448885 CWC27Q6UX04 472 aaKnown RBP7.18□□□□□ -1.26
PCDH15-219ENST00000448885 CACNA2D4Q7Z3S7 1137 aa7.18□□□□□ -1.26
PCDH15-219ENST00000448885 TXNDC2Q86VQ3 553 aa7.18□□□□□ -1.26
PCDH15-219ENST00000448885 HOOK3Q86VS8 718 aa7.18□□□□□ -1.26
PCDH15-219ENST00000448885 DDX11Q96FC9 970 aa7.18□□□□□ -1.26
PCDH15-219ENST00000448885 CDK19Q9BWU1 502 aa7.18□□□□□ -1.26
PCDH15-219ENST00000448885 RAB34Q9BZG1 259 aa7.18□□□□□ -1.26
PCDH15-219ENST00000448885 TAOK3Q9H2K8 898 aa7.18□□□□□ -1.26
PCDH15-219ENST00000448885 CEP126Q9P2H0 1117 aa7.18□□□□□ -1.26
PCDH15-219ENST00000448885 CIZ1Q9ULV3 898 aaPredicted RBP7.18□□□□□ -1.26
PCDH15-219ENST00000448885 CFAP100Q494V2 611 aa7.18□□□□□ -1.26
PCDH15-219ENST00000448885 CCDC83Q8IWF9 413 aa7.18□□□□□ -1.26
PCDH15-219ENST00000448885 RTEL1-TNFRSF6BF6WH68 1400 aa7.18□□□□□ -1.26
PCDH15-219ENST00000448885 RAB11FIP3O75154 756 aa7.18□□□□□ -1.26
PCDH15-219ENST00000448885 TMEM132EQ6IEE7 984 aa7.18□□□□□ -1.26
PCDH15-219ENST00000448885 LUZP1Q86V48 1076 aa7.18□□□□□ -1.26
PCDH15-219ENST00000448885 PRAM1Q96QH2 718 aa7.18□□□□□ -1.26
PCDH15-219ENST00000448885 USO1O60763 962 aaKnown RBP7.17□□□□□ -1.26
PCDH15-219ENST00000448885 MVPQ14764 893 aaKnown RBP7.17□□□□□ -1.26
PCDH15-219ENST00000448885 ALS2CR12Q96Q35 445 aa7.17□□□□□ -1.26
PCDH15-219ENST00000448885 GAPVD1Q14C86 1478 aa7.17□□□□□ -1.26
PCDH15-219ENST00000448885 BAG4O95429 457 aaKnown RBP7.17□□□□□ -1.26
PCDH15-219ENST00000448885 SLF2Q8IX21 1173 aa7.17□□□□□ -1.26
PCDH15-219ENST00000448885 TMEM87AQ8NBN3 555 aa7.17□□□□□ -1.26
PCDH15-219ENST00000448885 PIBF1Q8WXW3 757 aa7.17□□□□□ -1.26
PCDH15-219ENST00000448885 CTNNBL1Q8WYA6 563 aaPredicted RBP7.17□□□□□ -1.26
PCDH15-219ENST00000448885 DRC1Q96MC2 740 aa7.17□□□□□ -1.26
PCDH15-219ENST00000448885 PLEKHH2Q8IVE3 1493 aa7.17□□□□□ -1.26
PCDH15-219ENST00000448885 CASTP20810 708 aaKnown RBP7.17□□□□□ -1.26
PCDH15-219ENST00000448885 UBXN4Q92575 508 aa7.17□□□□□ -1.26
PCDH15-219ENST00000448885 FERMT1Q9BQL6 677 aa7.17□□□□□ -1.26
PCDH15-219ENST00000448885 ANO10Q9NW15 660 aa7.17□□□□□ -1.26
PCDH15-219ENST00000448885 GSTTP1A0A1W2PQM5 241 aa7.17□□□□□ -1.26
PCDH15-219ENST00000448885 YEATS4O95619 227 aa7.17□□□□□ -1.26
PCDH15-219ENST00000448885 STARD3NLO95772 234 aa7.17□□□□□ -1.26
PCDH15-219ENST00000448885 SPATA24Q86W54 205 aa7.17□□□□□ -1.26
PCDH15-219ENST00000448885 FAM107BQ9H098 131 aa7.17□□□□□ -1.26
PCDH15-219ENST00000448885 SPINK5Q9NQ38 1064 aaPredicted RBP7.17□□□□□ -1.26
PCDH15-219ENST00000448885 COMMD10Q9Y6G5 202 aa7.17□□□□□ -1.26
PCDH15-219ENST00000448885 SSRP1Q08945 709 aaKnown RBP7.17□□□□□ -1.26
PCDH15-219ENST00000448885 SULT6B1Q6IMI4 303 aa7.17□□□□□ -1.26
PCDH15-219ENST00000448885 BICDL1Q6ZP65 573 aa7.17□□□□□ -1.26
PCDH15-219ENST00000448885 CGNQ9P2M7 1197 aaKnown RBP7.17□□□□□ -1.26
PCDH15-219ENST00000448885 A0A087WZG4 1122 aa7.16□□□□□ -1.26
PCDH15-219ENST00000448885 CCDC196A0A1B0GTZ2 297 aa7.16□□□□□ -1.26
PCDH15-219ENST00000448885 SRGAP3O43295 1099 aa7.16□□□□□ -1.26
PCDH15-219ENST00000448885 DDX12PQ92771 950 aa7.16□□□□□ -1.26
PCDH15-219ENST00000448885 LRRC45Q96CN5 670 aa7.16□□□□□ -1.26
PCDH15-219ENST00000448885 ERICH4A6NGS2 130 aa7.16□□□□□ -1.26
PCDH15-219ENST00000448885 IDH1O75874 414 aaKnown RBP7.16□□□□□ -1.26
PCDH15-219ENST00000448885 CTNNA2P26232 953 aa7.16□□□□□ -1.26
PCDH15-219ENST00000448885 FAM114A1Q8IWE2 563 aa7.16□□□□□ -1.26
PCDH15-219ENST00000448885 DDX23Q9BUQ8 820 aaKnown RBP7.16□□□□□ -1.26
PCDH15-219ENST00000448885 UBA5Q9GZZ9 404 aa7.16□□□□□ -1.26
PCDH15-219ENST00000448885 U3KPZ7 1027 aaPredicted RBP7.16□□□□□ -1.26
PCDH15-219ENST00000448885 HMGB1P09429 215 aaKnown RBP7.16□□□□□ -1.26
PCDH15-219ENST00000448885 METTL24Q5JXM2 366 aa7.16□□□□□ -1.26
PCDH15-219ENST00000448885 FILIP1Q7Z7B0 1213 aa7.16□□□□□ -1.26
PCDH15-219ENST00000448885 TSR2Q969E8 191 aaKnown RBP7.16□□□□□ -1.26
PCDH15-219ENST00000448885 MPHOSPH6Q99547 160 aaKnown RBP7.16□□□□□ -1.26
PCDH15-219ENST00000448885 UBE4AQ14139 1066 aa7.16□□□□□ -1.26
PCDH15-219ENST00000448885 STXBP4Q6ZWJ1 553 aa7.16□□□□□ -1.26
PCDH15-219ENST00000448885 THEMISQ8N1K5 641 aaPredicted RBP7.16□□□□□ -1.26
PCDH15-219ENST00000448885 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.16□□□□□ -1.26
PCDH15-219ENST00000448885 NAA15Q9BXJ9 866 aaKnown RBP7.16□□□□□ -1.26
PCDH15-219ENST00000448885 MKNK2Q9HBH9 465 aa7.16□□□□□ -1.26
PCDH15-219ENST00000448885 CCDC96Q2M329 555 aa7.16□□□□□ -1.26
PCDH15-219ENST00000448885 HFM1A2PYH4 1435 aa7.16□□□□□ -1.26
PCDH15-219ENST00000448885 URB2Q14146 1524 aaKnown RBP7.15□□□□□ -1.26
PCDH15-219ENST00000448885 BCAR3O75815 825 aa7.15□□□□□ -1.26
PCDH15-219ENST00000448885 NUP88Q99567 741 aaPredicted RBP7.15□□□□□ -1.26
PCDH15-219ENST00000448885 PYM1Q9BRP8 204 aaKnown RBP7.15□□□□□ -1.26
PCDH15-219ENST00000448885 SSX2IPQ9Y2D8 614 aa7.15□□□□□ -1.26
PCDH15-219ENST00000448885 ZPR1O75312 459 aa7.15□□□□□ -1.26
PCDH15-219ENST00000448885 SLC5A1P13866 664 aa7.15□□□□□ -1.26
PCDH15-219ENST00000448885 CCDC183Q5T5S1 534 aa7.15□□□□□ -1.26
PCDH15-219ENST00000448885 C6orf163Q5TEZ5 329 aa7.15□□□□□ -1.26
PCDH15-219ENST00000448885 SREK1Q8WXA9 508 aaKnown RBP7.15□□□□□ -1.26
PCDH15-219ENST00000448885 BCORL1Q5H9F3 1711 aa7.15□□□□□ -1.26
PCDH15-219ENST00000448885 TOP1P11387 765 aaKnown RBP7.15□□□□□ -1.26
PCDH15-219ENST00000448885 SFPQP23246 707 aaKnown RBP eCLIP7.15□□□□□ -1.26
PCDH15-219ENST00000448885 CETN1Q12798 172 aa7.15□□□□□ -1.26
PCDH15-219ENST00000448885 CAMK4Q16566 473 aa7.15□□□□□ -1.26
PCDH15-219ENST00000448885 DZIP1Q86YF9 867 aaKnown RBP7.15□□□□□ -1.26
PCDH15-219ENST00000448885 ERBINQ96RT1 1412 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms