RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 RBM42Q9BTD8 480 aaKnown RBP24.93■■□□□ 1.58
CHCHD3-203ENST00000448878 BCS1LQ9Y276 419 aa24.93■■□□□ 1.58
CHCHD3-203ENST00000448878 RTCBQ9Y3I0 505 aaKnown RBP24.93■■□□□ 1.58
CHCHD3-203ENST00000448878 MAP2P11137 1827 aaKnown RBP24.91■■□□□ 1.58
CHCHD3-203ENST00000448878 A0A0G2JLW4 131 aa24.9■■□□□ 1.58
CHCHD3-203ENST00000448878 POLKQ9UBT6 870 aa24.9■■□□□ 1.58
CHCHD3-203ENST00000448878 NCAPD2Q15021 1401 aa24.89■■□□□ 1.58
CHCHD3-203ENST00000448878 KIF3CO14782 793 aa24.89■■□□□ 1.58
CHCHD3-203ENST00000448878 ARHGAP27Q6ZUM4 889 aa24.89■■□□□ 1.58
CHCHD3-203ENST00000448878 NLGN1Q8N2Q7 840 aa24.88■■□□□ 1.57
CHCHD3-203ENST00000448878 TGFB2P61812 414 aa24.87■■□□□ 1.57
CHCHD3-203ENST00000448878 EIF4A2Q14240 407 aaKnown RBP24.87■■□□□ 1.57
CHCHD3-203ENST00000448878 RFC4P35249 363 aa24.86■■□□□ 1.57
CHCHD3-203ENST00000448878 ARHGEF1Q92888 912 aaKnown RBP24.85■■□□□ 1.57
CHCHD3-203ENST00000448878 CCDC87Q9NVE4 849 aa24.85■■□□□ 1.57
CHCHD3-203ENST00000448878 PARP3Q9Y6F1 533 aa24.85■■□□□ 1.57
CHCHD3-203ENST00000448878 PXDNLA1KZ92 1463 aa24.84■■□□□ 1.57
CHCHD3-203ENST00000448878 CICQ96RK0 1608 aaPredicted RBP24.84■■□□□ 1.57
CHCHD3-203ENST00000448878 FCHSD2O94868 740 aa24.84■■□□□ 1.57
CHCHD3-203ENST00000448878 N4BP2Q86UW6 1770 aaPredicted RBP24.84■■□□□ 1.57
CHCHD3-203ENST00000448878 HSP90AB1P08238 724 aaKnown RBP24.83■■□□□ 1.57
CHCHD3-203ENST00000448878 CABP4P57796 275 aa24.83■■□□□ 1.57
CHCHD3-203ENST00000448878 ANKRD26Q9UPS8 1709 aa24.83■■□□□ 1.57
CHCHD3-203ENST00000448878 ERVV-2B6SEH9 535 aa24.82■■□□□ 1.56
CHCHD3-203ENST00000448878 DPEP1P16444 411 aa24.82■■□□□ 1.56
CHCHD3-203ENST00000448878 PLEKHO1Q53GL0 409 aaPredicted RBP24.82■■□□□ 1.56
CHCHD3-203ENST00000448878 SLC4A9Q96Q91 983 aa24.82■■□□□ 1.56
CHCHD3-203ENST00000448878 APLP1P51693 650 aa24.81■■□□□ 1.56
CHCHD3-203ENST00000448878 DCAF5Q96JK2 942 aa24.81■■□□□ 1.56
CHCHD3-203ENST00000448878 TOMM70O94826 608 aa24.8■■□□□ 1.56
CHCHD3-203ENST00000448878 GYS1P13807 737 aa24.8■■□□□ 1.56
CHCHD3-203ENST00000448878 ADRA2BP18089 450 aa24.8■■□□□ 1.56
CHCHD3-203ENST00000448878 RC3H1Q5TC82 1133 aaKnown RBP24.8■■□□□ 1.56
CHCHD3-203ENST00000448878 ZNF530Q6P9A1 599 aaPredicted RBP24.8■■□□□ 1.56
CHCHD3-203ENST00000448878 PTCD1O75127 700 aaKnown RBP24.79■■□□□ 1.56
CHCHD3-203ENST00000448878 RPS6KA4O75676 772 aa24.79■■□□□ 1.56
CHCHD3-203ENST00000448878 NMRK2Q9NPI5 230 aa24.78■■□□□ 1.56
CHCHD3-203ENST00000448878 KDRP35968 1356 aa24.78■■□□□ 1.56
CHCHD3-203ENST00000448878 C16orf71Q8IYS4 520 aaPredicted RBP24.77■■□□□ 1.56
CHCHD3-203ENST00000448878 CNTNAP4Q9C0A0 1308 aa24.77■■□□□ 1.56
CHCHD3-203ENST00000448878 C10orf71Q711Q0 1435 aa24.77■■□□□ 1.56
CHCHD3-203ENST00000448878 MTHFSP49914 203 aa24.76■■□□□ 1.55
CHCHD3-203ENST00000448878 C1orf141Q5JVX7 400 aa24.76■■□□□ 1.55
CHCHD3-203ENST00000448878 KIF13BQ9NQT8 1826 aa24.76■■□□□ 1.55
CHCHD3-203ENST00000448878 AMOTQ4VCS5 1084 aa24.74■■□□□ 1.55
CHCHD3-203ENST00000448878 C9orf131Q5VYM1 1079 aa24.74■■□□□ 1.55
CHCHD3-203ENST00000448878 C4AP0C0L4 1744 aa24.74■■□□□ 1.55
CHCHD3-203ENST00000448878 KIAA1551Q9HCM1 1747 aa24.74■■□□□ 1.55
CHCHD3-203ENST00000448878 PIM2Q9P1W9 311 aa24.73■■□□□ 1.55
CHCHD3-203ENST00000448878 SRP68Q9UHB9 627 aaKnown RBP24.73■■□□□ 1.55
CHCHD3-203ENST00000448878 CRKLP46109 303 aaKnown RBP24.72■■□□□ 1.55
CHCHD3-203ENST00000448878 NFATC2IPQ8NCF5 419 aa24.72■■□□□ 1.55
CHCHD3-203ENST00000448878 KCNA3P22001 575 aa24.71■■□□□ 1.55
CHCHD3-203ENST00000448878 COL5A3P25940 1745 aaPredicted RBP24.7■■□□□ 1.54
CHCHD3-203ENST00000448878 TRIM26Q12899 539 aaPredicted RBP24.7■■□□□ 1.54
CHCHD3-203ENST00000448878 DALRD3Q5D0E6 543 aaKnown RBP24.7■■□□□ 1.54
CHCHD3-203ENST00000448878 PANK3Q9H999 370 aa24.7■■□□□ 1.54
CHCHD3-203ENST00000448878 KDM6AO15550 1401 aaPredicted RBP24.69■■□□□ 1.54
CHCHD3-203ENST00000448878 PLEKHG2Q9H7P9 1386 aa24.69■■□□□ 1.54
CHCHD3-203ENST00000448878 ZNF831Q5JPB2 1677 aa24.69■■□□□ 1.54
CHCHD3-203ENST00000448878 FKBP8Q14318 412 aa24.69■■□□□ 1.54
CHCHD3-203ENST00000448878 AEBP1Q8IUX7 1158 aa24.69■■□□□ 1.54
CHCHD3-203ENST00000448878 MORC1Q86VD1 984 aa24.68■■□□□ 1.54
CHCHD3-203ENST00000448878 DNAJC5GQ8N7S2 189 aa24.68■■□□□ 1.54
CHCHD3-203ENST00000448878 RNF181Q9P0P0 153 aa24.68■■□□□ 1.54
CHCHD3-203ENST00000448878 CHRNA5P30532 468 aa24.67■■□□□ 1.54
CHCHD3-203ENST00000448878 SULT6B1Q6IMI4 303 aa24.66■■□□□ 1.54
CHCHD3-203ENST00000448878 RBM46Q8TBY0 533 aaKnown RBP24.66■■□□□ 1.54
CHCHD3-203ENST00000448878 TIMELESSQ9UNS1 1208 aa24.66■■□□□ 1.54
CHCHD3-203ENST00000448878 MYH14Q7Z406 1995 aaKnown RBP24.65■■□□□ 1.54
CHCHD3-203ENST00000448878 KDM2BQ8NHM5 1336 aa24.65■■□□□ 1.54
CHCHD3-203ENST00000448878 USP42Q9H9J4 1324 aaKnown RBP24.65■■□□□ 1.54
CHCHD3-203ENST00000448878 ZPR1O75312 459 aa24.65■■□□□ 1.54
CHCHD3-203ENST00000448878 HTRA3P83110 453 aa24.65■■□□□ 1.54
CHCHD3-203ENST00000448878 RRAGCQ9HB90 399 aa24.65■■□□□ 1.54
CHCHD3-203ENST00000448878 DDR1Q08345 913 aa24.64■■□□□ 1.54
CHCHD3-203ENST00000448878 BRCA1P38398 1863 aaKnown RBP24.63■■□□□ 1.53
CHCHD3-203ENST00000448878 KCPQ6ZWJ8 1503 aa24.62■■□□□ 1.53
CHCHD3-203ENST00000448878 USPL1Q5W0Q7 1092 aa24.62■■□□□ 1.53
CHCHD3-203ENST00000448878 EIF4G2P78344 907 aaKnown RBP eCLIP24.61■■□□□ 1.532e-10■■■■□ 24.2
CHCHD3-203ENST00000448878 ARFGEF1Q9Y6D6 1849 aa24.61■■□□□ 1.53
CHCHD3-203ENST00000448878 INTS5Q6P9B9 1019 aaKnown RBP24.6■■□□□ 1.53
CHCHD3-203ENST00000448878 DNAJC10Q8IXB1 793 aa24.6■■□□□ 1.53
CHCHD3-203ENST00000448878 PCGF6Q9BYE7 350 aa24.6■■□□□ 1.53
CHCHD3-203ENST00000448878 POLRMTO00411 1230 aaKnown RBP24.59■■□□□ 1.53
CHCHD3-203ENST00000448878 HSPA5P11021 654 aaKnown RBP24.59■■□□□ 1.53
CHCHD3-203ENST00000448878 FSTL1Q12841 308 aa24.59■■□□□ 1.53
CHCHD3-203ENST00000448878 WDR90Q96KV7 1748 aa24.58■■□□□ 1.53
CHCHD3-203ENST00000448878 TM4SF1P30408 202 aa24.58■■□□□ 1.53
CHCHD3-203ENST00000448878 AKAP4Q5JQC9 854 aa24.57■■□□□ 1.52
CHCHD3-203ENST00000448878 KLRG1Q96E93 195 aa24.57■■□□□ 1.52
CHCHD3-203ENST00000448878 TJP1Q07157 1748 aa24.56■■□□□ 1.52
CHCHD3-203ENST00000448878 LGR6Q9HBX8 967 aa24.56■■□□□ 1.52
CHCHD3-203ENST00000448878 KNSTRNQ9Y448 316 aa24.56■■□□□ 1.52
CHCHD3-203ENST00000448878 RASSF7Q02833 373 aa24.55■■□□□ 1.52
CHCHD3-203ENST00000448878 SLC39A6Q13433 755 aa24.55■■□□□ 1.52
CHCHD3-203ENST00000448878 SLC52A2Q9HAB3 445 aa24.55■■□□□ 1.52
CHCHD3-203ENST00000448878 IL13P35225 146 aa24.54■■□□□ 1.52
CHCHD3-203ENST00000448878 HMOX1P09601 288 aa24.52■■□□□ 1.52
CHCHD3-203ENST00000448878 CYP19A1P11511 503 aaPredicted RBP24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms