RNA–Protein interactions for RNA: ENST00000448502.5

UBE2F-217, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

TSL 4

Gene UBE2F, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-217	ENST00000448502	C1QTNF8	P60827	252 aa		27.86	■■■□□ 2.05
UBE2F-217	ENST00000448502	KDR	P35968	1356 aa		27.86	■■■□□ 2.05
UBE2F-217	ENST00000448502	GNPAT	O15228	680 aa		27.85	■■■□□ 2.05
UBE2F-217	ENST00000448502	SLC4A9	Q96Q91	983 aa		27.83	■■■□□ 2.05
UBE2F-217	ENST00000448502	ZNF831	Q5JPB2	1677 aa		27.83	■■■□□ 2.05
UBE2F-217	ENST00000448502	KDM6A	O15550	1401 aa	Predicted RBP	27.83	■■■□□ 2.05
UBE2F-217	ENST00000448502	ERVV-2	B6SEH9	535 aa		27.82	■■■□□ 2.04
UBE2F-217	ENST00000448502	MORC1	Q86VD1	984 aa		27.82	■■■□□ 2.04
UBE2F-217	ENST00000448502	PLEKHO1	Q53GL0	409 aa	Predicted RBP	27.81	■■■□□ 2.04
UBE2F-217	ENST00000448502	AEBP1	Q8IUX7	1158 aa		27.81	■■■□□ 2.04
UBE2F-217	ENST00000448502	DCAF5	Q96JK2	942 aa		27.81	■■■□□ 2.04
UBE2F-217	ENST00000448502	ZNF530	Q6P9A1	599 aa	Predicted RBP	27.8	■■■□□ 2.04
UBE2F-217	ENST00000448502	COL5A3	P25940	1745 aa	Predicted RBP	27.8	■■■□□ 2.04
UBE2F-217	ENST00000448502	HSP90AB1	P08238	724 aa	Known RBP	27.79	■■■□□ 2.04
UBE2F-217	ENST00000448502	GIGYF1	O75420	1035 aa	Predicted RBP	27.78	■■■□□ 2.04
UBE2F-217	ENST00000448502	SENP3-EIF4A1	A0A087X0R7	540 aa		27.77	■■■□□ 2.04
UBE2F-217	ENST00000448502	AMOT	Q4VCS5	1084 aa		27.77	■■■□□ 2.04
UBE2F-217	ENST00000448502	RBM42	Q9BTD8	480 aa	Known RBP	27.77	■■■□□ 2.04
UBE2F-217	ENST00000448502	MYH14	Q7Z406	1995 aa	Known RBP	27.75	■■■□□ 2.03
UBE2F-217	ENST00000448502	WWC3	Q9ULE0	1092 aa		27.75	■■■□□ 2.03
UBE2F-217	ENST00000448502	KNSTRN	Q9Y448	316 aa		27.75	■■■□□ 2.03
UBE2F-217	ENST00000448502	ATP10D	Q9P241	1426 aa		27.75	■■■□□ 2.03
UBE2F-217	ENST00000448502	CABP4	P57796	275 aa		27.74	■■■□□ 2.03
UBE2F-217	ENST00000448502	RTCB	Q9Y3I0	505 aa	Known RBP	27.74	■■■□□ 2.03
UBE2F-217	ENST00000448502	MMP10	P09238	476 aa		27.73	■■■□□ 2.03
UBE2F-217	ENST00000448502	SULT6B1	Q6IMI4	303 aa		27.73	■■■□□ 2.03
UBE2F-217	ENST00000448502	KIF13B	Q9NQT8	1826 aa		27.73	■■■□□ 2.03
UBE2F-217	ENST00000448502	IL13	P35225	146 aa		27.72	■■■□□ 2.03
UBE2F-217	ENST00000448502	MTHFS	P49914	203 aa		27.72	■■■□□ 2.03
UBE2F-217	ENST00000448502	TRAPPC3L	Q5T215	181 aa		27.72	■■■□□ 2.03
UBE2F-217	ENST00000448502	RC3H1	Q5TC82	1133 aa	Known RBP	27.72	■■■□□ 2.03
UBE2F-217	ENST00000448502	CNTNAP4	Q9C0A0	1308 aa		27.71	■■■□□ 2.03
UBE2F-217	ENST00000448502	AMER1	Q5JTC6	1135 aa	Predicted RBP	27.71	■■■□□ 2.03
UBE2F-217	ENST00000448502	KIAA1551	Q9HCM1	1747 aa		27.71	■■■□□ 2.03
UBE2F-217	ENST00000448502	CEP350	Q5VT06	3117 aa		27.71	■■■□□ 2.03
UBE2F-217	ENST00000448502	ADCY9	O60503	1353 aa		27.71	■■■□□ 2.03
UBE2F-217	ENST00000448502	C1orf141	Q5JVX7	400 aa		27.7	■■■□□ 2.02
UBE2F-217	ENST00000448502	ARHGEF1	Q92888	912 aa	Known RBP	27.7	■■■□□ 2.02
UBE2F-217	ENST00000448502	SCN11A	Q9UI33	1791 aa		27.7	■■■□□ 2.02
UBE2F-217	ENST00000448502	CIC	Q96RK0	1608 aa	Predicted RBP	27.7	■■■□□ 2.02
UBE2F-217	ENST00000448502	C4A	P0C0L4	1744 aa		27.7	■■■□□ 2.02
UBE2F-217	ENST00000448502	ADRA2B	P18089	450 aa		27.68	■■■□□ 2.02
UBE2F-217	ENST00000448502	NFATC2IP	Q8NCF5	419 aa		27.68	■■■□□ 2.02
UBE2F-217	ENST00000448502	PXDNL	A1KZ92	1463 aa		27.68	■■■□□ 2.02
UBE2F-217	ENST00000448502	KIF7	Q2M1P5	1343 aa		27.67	■■■□□ 2.02
UBE2F-217	ENST00000448502	PTCD1	O75127	700 aa	Known RBP	27.67	■■■□□ 2.02
UBE2F-217	ENST00000448502	RPS6KA4	O75676	772 aa		27.67	■■■□□ 2.02
UBE2F-217	ENST00000448502	N4BP2	Q86UW6	1770 aa	Predicted RBP	27.67	■■■□□ 2.02
UBE2F-217	ENST00000448502	TJP1	Q07157	1748 aa		27.67	■■■□□ 2.02
UBE2F-217	ENST00000448502	NLGN1	Q8N2Q7	840 aa		27.66	■■■□□ 2.02
UBE2F-217	ENST00000448502	GYS1	P13807	737 aa		27.65	■■■□□ 2.02
UBE2F-217	ENST00000448502	C10orf71	Q711Q0	1435 aa		27.65	■■■□□ 2.02
UBE2F-217	ENST00000448502	RFC4	P35249	363 aa		27.63	■■■□□ 2.01
UBE2F-217	ENST00000448502	VIRMA	Q69YN4	1812 aa	Known RBP	27.62	■■■□□ 2.01
UBE2F-217	ENST00000448502	CRKL	P46109	303 aa	Known RBP	27.62	■■■□□ 2.01
UBE2F-217	ENST00000448502	GPBP1L1	Q9HC44	474 aa	Predicted RBP	27.61	■■■□□ 2.01
UBE2F-217	ENST00000448502	AKAP4	Q5JQC9	854 aa		27.6	■■■□□ 2.01
UBE2F-217	ENST00000448502	PER1	O15534	1290 aa	Predicted RBP	27.59	■■■□□ 2.01
UBE2F-217	ENST00000448502	TGFB2	P61812	414 aa		27.59	■■■□□ 2.01
UBE2F-217	ENST00000448502	ZNF526	Q8TF50	670 aa	Predicted RBP	27.59	■■■□□ 2.01
UBE2F-217	ENST00000448502	BRCA1	P38398	1863 aa	Known RBP	27.59	■■■□□ 2.01
UBE2F-217	ENST00000448502		A0A0G2JLW4	131 aa		27.58	■■■□□ 2.01
UBE2F-217	ENST00000448502	LGR6	Q9HBX8	967 aa		27.58	■■■□□ 2.01
UBE2F-217	ENST00000448502	ADAMTS7	Q9UKP4	1686 aa		27.57	■■■□□ 2
UBE2F-217	ENST00000448502	HMOX1	P09601	288 aa		27.57	■■■□□ 2
UBE2F-217	ENST00000448502	CCDC87	Q9NVE4	849 aa		27.57	■■■□□ 2
UBE2F-217	ENST00000448502	SRP68	Q9UHB9	627 aa	Known RBP	27.57	■■■□□ 2
UBE2F-217	ENST00000448502	MRC1	P22897	1456 aa		27.57	■■■□□ 2
UBE2F-217	ENST00000448502	SLC52A2	Q9HAB3	445 aa		27.56	■■■□□ 2
UBE2F-217	ENST00000448502	PARP3	Q9Y6F1	533 aa		27.56	■■■□□ 2
UBE2F-217	ENST00000448502	DPEP1	P16444	411 aa		27.55	■■■□□ 2
UBE2F-217	ENST00000448502	INTS5	Q6P9B9	1019 aa	Known RBP	27.55	■■■□□ 2
UBE2F-217	ENST00000448502	BCS1L	Q9Y276	419 aa		27.55	■■■□□ 2
UBE2F-217	ENST00000448502	CC2D1B	Q5T0F9	858 aa	Known RBP	27.54	■■■□□ 2
UBE2F-217	ENST00000448502	USP42	Q9H9J4	1324 aa	Known RBP	27.54	■■■□□ 2
UBE2F-217	ENST00000448502	RNMT	O43148	476 aa	Known RBP	27.53	■■■□□ 2
UBE2F-217	ENST00000448502	FKBP8	Q14318	412 aa		27.53	■■■□□ 2
UBE2F-217	ENST00000448502	DNAJC10	Q8IXB1	793 aa		27.53	■■■□□ 2
UBE2F-217	ENST00000448502	DDR1	Q08345	913 aa		27.51	■■□□□ 1.99
UBE2F-217	ENST00000448502	SLC39A6	Q13433	755 aa		27.51	■■□□□ 1.99
UBE2F-217	ENST00000448502	MTHFSD	Q2M296	383 aa	Known RBP	27.51	■■□□□ 1.99
UBE2F-217	ENST00000448502	KCP	Q6ZWJ8	1503 aa		27.51	■■□□□ 1.99
UBE2F-217	ENST00000448502	DIAPH1	O60610	1272 aa	Known RBP	27.5	■■□□□ 1.99
UBE2F-217	ENST00000448502	KCNA3	P22001	575 aa		27.5	■■□□□ 1.99
UBE2F-217	ENST00000448502	ARFGEF1	Q9Y6D6	1849 aa		27.49	■■□□□ 1.99
UBE2F-217	ENST00000448502	COL3A1	P02461	1466 aa	Predicted RBP	27.49	■■□□□ 1.99
UBE2F-217	ENST00000448502	SOS1	Q07889	1333 aa	Predicted RBP	27.47	■■□□□ 1.99
UBE2F-217	ENST00000448502	FCHSD2	O94868	740 aa		27.47	■■□□□ 1.99
UBE2F-217	ENST00000448502	CYP19A1	P11511	503 aa	Predicted RBP	27.47	■■□□□ 1.99
UBE2F-217	ENST00000448502	UBR2	Q8IWV8	1755 aa		27.46	■■□□□ 1.99
UBE2F-217	ENST00000448502	KIF3C	O14782	793 aa		27.46	■■□□□ 1.99
UBE2F-217	ENST00000448502	ARHGAP27	Q6ZUM4	889 aa		27.46	■■□□□ 1.99
UBE2F-217	ENST00000448502	NPC1L1	Q9UHC9	1359 aa		27.45	■■□□□ 1.98
UBE2F-217	ENST00000448502	POLRMT	O00411	1230 aa	Known RBP	27.44	■■□□□ 1.98
UBE2F-217	ENST00000448502	TM4SF1	P30408	202 aa		27.44	■■□□□ 1.98
UBE2F-217	ENST00000448502	USPL1	Q5W0Q7	1092 aa		27.44	■■□□□ 1.98
UBE2F-217	ENST00000448502	AFDN	P55196	1824 aa	Known RBP	27.42	■■□□□ 1.98
UBE2F-217	ENST00000448502	ZPR1	O75312	459 aa		27.42	■■□□□ 1.98
UBE2F-217	ENST00000448502	PIM2	Q9P1W9	311 aa		27.42	■■□□□ 1.98
UBE2F-217	ENST00000448502	ZBTB1	Q9Y2K1	713 aa		27.42	■■□□□ 1.98

Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms