RNA–Protein interactions for RNA: ENST00000447515.5

GGA1-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 4

Gene GGA1, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-213ENST00000447515 CAPN15O75808 1086 aa20.76■□□□□ 0.91
GGA1-213ENST00000447515 ASAP1Q9ULH1 1129 aa20.76■□□□□ 0.91
GGA1-213ENST00000447515 EIF4G2P78344 907 aaKnown RBP eCLIP20.75■□□□□ 0.91
GGA1-213ENST00000447515 BRCA1P38398 1863 aaKnown RBP20.75■□□□□ 0.91
GGA1-213ENST00000447515 HSPA5P11021 654 aaKnown RBP20.73■□□□□ 0.91
GGA1-213ENST00000447515 NKX1-1Q15270 411 aaPredicted RBP20.73■□□□□ 0.91
GGA1-213ENST00000447515 KIF20BQ96Q89 1820 aa20.73■□□□□ 0.91
GGA1-213ENST00000447515 FLT4P35916 1363 aa20.72■□□□□ 0.91
GGA1-213ENST00000447515 SLC24A1O60721 1099 aa20.72■□□□□ 0.91
GGA1-213ENST00000447515 DPEP1P16444 411 aa20.72■□□□□ 0.91
GGA1-213ENST00000447515 ATP6V1AP38606 617 aa20.72■□□□□ 0.91
GGA1-213ENST00000447515 TGFB2P61812 414 aa20.72■□□□□ 0.91
GGA1-213ENST00000447515 RBM46Q8TBY0 533 aaKnown RBP20.71■□□□□ 0.91
GGA1-213ENST00000447515 KLRG1Q96E93 195 aa20.71■□□□□ 0.91
GGA1-213ENST00000447515 C10orf71Q711Q0 1435 aa20.7■□□□□ 0.9
GGA1-213ENST00000447515 FCHSD2O94868 740 aa20.7■□□□□ 0.9
GGA1-213ENST00000447515 TMF1P82094 1093 aa20.7■□□□□ 0.9
GGA1-213ENST00000447515 C9orf131Q5VYM1 1079 aa20.7■□□□□ 0.9
GGA1-213ENST00000447515 TMOD3Q9NYL9 352 aa20.7■□□□□ 0.9
GGA1-213ENST00000447515 EMILIN1Q9Y6C2 1016 aa20.7■□□□□ 0.9
GGA1-213ENST00000447515 JMYQ8N9B5 988 aa20.69■□□□□ 0.9
GGA1-213ENST00000447515 ATG3Q9NT62 314 aa20.69■□□□□ 0.9
GGA1-213ENST00000447515 C4AP0C0L4 1744 aa20.69■□□□□ 0.9
GGA1-213ENST00000447515 ARFGEF1Q9Y6D6 1849 aa20.69■□□□□ 0.9
GGA1-213ENST00000447515 SLC4A9Q96Q91 983 aa20.67■□□□□ 0.9
GGA1-213ENST00000447515 NCAPD2Q15021 1401 aa20.67■□□□□ 0.9
GGA1-213ENST00000447515 KCPQ6ZWJ8 1503 aa20.67■□□□□ 0.9
GGA1-213ENST00000447515 KCNA3P22001 575 aa20.66■□□□□ 0.9
GGA1-213ENST00000447515 TRAPPC3LQ5T215 181 aa20.66■□□□□ 0.9
GGA1-213ENST00000447515 C16orf71Q8IYS4 520 aaPredicted RBP20.66■□□□□ 0.9
GGA1-213ENST00000447515 SPG7Q9UQ90 795 aa20.66■□□□□ 0.9
GGA1-213ENST00000447515 NLGN1Q8N2Q7 840 aa20.65■□□□□ 0.9
GGA1-213ENST00000447515 ARHGEF1Q92888 912 aaKnown RBP20.65■□□□□ 0.9
GGA1-213ENST00000447515 MYH14Q7Z406 1995 aaKnown RBP20.65■□□□□ 0.9
GGA1-213ENST00000447515 SBF1O95248 1867 aa20.64■□□□□ 0.9
GGA1-213ENST00000447515 KIF24Q5T7B8 1368 aa20.64■□□□□ 0.89
GGA1-213ENST00000447515 PPM1GO15355 546 aaPredicted RBP20.64■□□□□ 0.89
GGA1-213ENST00000447515 GYS1P13807 737 aa20.64■□□□□ 0.89
GGA1-213ENST00000447515 TNS4Q8IZW8 715 aa20.64■□□□□ 0.89
GGA1-213ENST00000447515 CCDC87Q9NVE4 849 aa20.64■□□□□ 0.89
GGA1-213ENST00000447515 RTCBQ9Y3I0 505 aaKnown RBP20.64■□□□□ 0.89
GGA1-213ENST00000447515 COL5A3P25940 1745 aaPredicted RBP20.64■□□□□ 0.89
GGA1-213ENST00000447515 KDRP35968 1356 aa20.63■□□□□ 0.89
GGA1-213ENST00000447515 PHKG2P15735 406 aa20.63■□□□□ 0.89
GGA1-213ENST00000447515 CDCA8Q53HL2 280 aa20.63■□□□□ 0.89
GGA1-213ENST00000447515 RRAGCQ9HB90 399 aa20.63■□□□□ 0.89
GGA1-213ENST00000447515 FSTL1Q12841 308 aa20.62■□□□□ 0.89
GGA1-213ENST00000447515 EYA1Q99502 592 aa20.62■□□□□ 0.89
GGA1-213ENST00000447515 POLR3GLQ9BT43 218 aa20.61■□□□□ 0.89
GGA1-213ENST00000447515 RBM42Q9BTD8 480 aaKnown RBP20.61■□□□□ 0.89
GGA1-213ENST00000447515 PARP3Q9Y6F1 533 aa20.61■□□□□ 0.89
GGA1-213ENST00000447515 PLEKHG2Q9H7P9 1386 aa20.6■□□□□ 0.89
GGA1-213ENST00000447515 ZEB1P37275 1124 aaPredicted RBP20.6■□□□□ 0.89
GGA1-213ENST00000447515 IFNL2Q8IZJ0 200 aa20.6■□□□□ 0.89
GGA1-213ENST00000447515 CARD14Q9BXL6 1004 aa20.6■□□□□ 0.89
GGA1-213ENST00000447515 RNF181Q9P0P0 153 aa20.6■□□□□ 0.89
GGA1-213ENST00000447515 ANKRD26Q9UPS8 1709 aa20.59■□□□□ 0.89
GGA1-213ENST00000447515 TNRC6CQ9HCJ0 1690 aaKnown RBP20.59■□□□□ 0.89
GGA1-213ENST00000447515 PRELPP51888 382 aa20.59■□□□□ 0.89
GGA1-213ENST00000447515 ZNF831Q5JPB2 1677 aa20.58■□□□□ 0.89
GGA1-213ENST00000447515 RFC4P35249 363 aa20.58■□□□□ 0.89
GGA1-213ENST00000447515 DCAF5Q96JK2 942 aa20.58■□□□□ 0.89
GGA1-213ENST00000447515 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.58■□□□□ 0.89
GGA1-213ENST00000447515 PIM2Q9P1W9 311 aa20.58■□□□□ 0.89
GGA1-213ENST00000447515 KDM2BQ8NHM5 1336 aa20.57■□□□□ 0.88
GGA1-213ENST00000447515 RPS6KA4O75676 772 aa20.57■□□□□ 0.88
GGA1-213ENST00000447515 RC3H1Q5TC82 1133 aaKnown RBP20.57■□□□□ 0.88
GGA1-213ENST00000447515 SRP68Q9UHB9 627 aaKnown RBP20.57■□□□□ 0.88
GGA1-213ENST00000447515 ADRA2BP18089 450 aa20.56■□□□□ 0.88
GGA1-213ENST00000447515 CHRNA5P30532 468 aa20.56■□□□□ 0.88
GGA1-213ENST00000447515 DALRD3Q5D0E6 543 aaKnown RBP20.56■□□□□ 0.88
GGA1-213ENST00000447515 WASHC2AQ641Q2 1341 aa20.55■□□□□ 0.88
GGA1-213ENST00000447515 CNTNAP4Q9C0A0 1308 aa20.55■□□□□ 0.88
GGA1-213ENST00000447515 DDR1Q08345 913 aa20.55■□□□□ 0.88
GGA1-213ENST00000447515 FKBP8Q14318 412 aa20.54■□□□□ 0.88
GGA1-213ENST00000447515 SMC1BQ8NDV3 1235 aa20.53■□□□□ 0.88
GGA1-213ENST00000447515 CCDC88AQ3V6T2 1871 aa20.52■□□□□ 0.88
GGA1-213ENST00000447515 HSPA1AP0DMV8 641 aaKnown RBP20.52■□□□□ 0.88
GGA1-213ENST00000447515 HSPA1BP0DMV9 641 aaKnown RBP20.52■□□□□ 0.88
GGA1-213ENST00000447515 RASSF7Q02833 373 aa20.52■□□□□ 0.88
GGA1-213ENST00000447515 ERVV-2B6SEH9 535 aa20.5■□□□□ 0.87
GGA1-213ENST00000447515 EIF4A2Q14240 407 aaKnown RBP20.5■□□□□ 0.87
GGA1-213ENST00000447515 POLKQ9UBT6 870 aa20.5■□□□□ 0.87
GGA1-213ENST00000447515 PTCD1O75127 700 aaKnown RBP20.49■□□□□ 0.87
GGA1-213ENST00000447515 KDM6AO15550 1401 aaPredicted RBP20.49■□□□□ 0.87
GGA1-213ENST00000447515 USP42Q9H9J4 1324 aaKnown RBP20.49■□□□□ 0.87
GGA1-213ENST00000447515 CRKLP46109 303 aaKnown RBP20.48■□□□□ 0.87
GGA1-213ENST00000447515 ADAMTS7Q9UKP4 1686 aa20.48■□□□□ 0.87
GGA1-213ENST00000447515 TJP1Q07157 1748 aa20.47■□□□□ 0.87
GGA1-213ENST00000447515 AFDNP55196 1824 aaKnown RBP20.47■□□□□ 0.87
GGA1-213ENST00000447515 KIF7Q2M1P5 1343 aa20.47■□□□□ 0.87
GGA1-213ENST00000447515 POLRMTO00411 1230 aaKnown RBP20.46■□□□□ 0.87
GGA1-213ENST00000447515 TM4SF1P30408 202 aa20.45■□□□□ 0.86
GGA1-213ENST00000447515 TNNT2P45379 298 aaPredicted RBP20.45■□□□□ 0.86
GGA1-213ENST00000447515 CABP4P57796 275 aa20.45■□□□□ 0.86
GGA1-213ENST00000447515 TIAM2Q8IVF5 1701 aa20.44■□□□□ 0.86
GGA1-213ENST00000447515 ZNF530Q6P9A1 599 aaPredicted RBP20.44■□□□□ 0.86
GGA1-213ENST00000447515 GLTPD2A6NH11 291 aa20.43■□□□□ 0.86
GGA1-213ENST00000447515 VEGFAP15692 232 aaPredicted RBP20.43■□□□□ 0.86
GGA1-213ENST00000447515 HSP90AB1P08238 724 aaKnown RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms